RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CTXND1A0A1B0GTU2 59 aa12.74□□□□□ -0.37
CLN6-204ENST00000564752 GGTLC3B5MD39 225 aa12.74□□□□□ -0.37
CLN6-204ENST00000564752 TAAR5O14804 337 aa12.74□□□□□ -0.37
CLN6-204ENST00000564752 SUMO1P63165 101 aaKnown RBP12.74□□□□□ -0.37
CLN6-204ENST00000564752 TDRG1Q3Y452 100 aa12.74□□□□□ -0.37
CLN6-204ENST00000564752 AKR1C8PQ5T2L2 129 aa12.74□□□□□ -0.37
CLN6-204ENST00000564752 SPATA12Q7Z6I5 190 aa12.74□□□□□ -0.37
CLN6-204ENST00000564752 TVP23CQ96ET8 276 aa12.74□□□□□ -0.37
CLN6-204ENST00000564752 SPXQ9BT56 116 aa12.74□□□□□ -0.37
CLN6-204ENST00000564752 A0A096LPF7 62 aa12.73□□□□□ -0.37
CLN6-204ENST00000564752 BTF3P20290 206 aaKnown RBP12.73□□□□□ -0.37
CLN6-204ENST00000564752 SMLR1H3BR10 107 aa12.72□□□□□ -0.37
CLN6-204ENST00000564752 PAX4O43316 350 aa12.72□□□□□ -0.37
CLN6-204ENST00000564752 ZNF726P1Q15940 193 aa12.72□□□□□ -0.37
CLN6-204ENST00000564752 CYB561D1Q8N8Q1 229 aa12.72□□□□□ -0.37
CLN6-204ENST00000564752 SDF2L1Q9HCN8 221 aa12.72□□□□□ -0.37
CLN6-204ENST00000564752 PRO0255Q9UI72 69 aa12.72□□□□□ -0.37
CLN6-204ENST00000564752 EPDR1Q9UM22 224 aa12.72□□□□□ -0.37
CLN6-204ENST00000564752 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
CLN6-204ENST00000564752 ICOSQ9Y6W8 199 aa12.72□□□□□ -0.37
CLN6-204ENST00000564752 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
CLN6-204ENST00000564752 FLI1Q01543 452 aaPredicted RBP12.71□□□□□ -0.37
CLN6-204ENST00000564752 SLAQ13239 276 aa12.71□□□□□ -0.37
CLN6-204ENST00000564752 ZFP69Q49AA0 526 aa12.71□□□□□ -0.37
CLN6-204ENST00000564752 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.37
CLN6-204ENST00000564752 KCNS1Q96KK3 526 aa12.71□□□□□ -0.37
CLN6-204ENST00000564752 TRGV4A0A0C4DH28 118 aa12.7□□□□□ -0.38
CLN6-204ENST00000564752 IGHV3-16A0A0C4DH30 117 aa12.7□□□□□ -0.38
CLN6-204ENST00000564752 GNRH2O43555 120 aa12.7□□□□□ -0.38
CLN6-204ENST00000564752 TYMSP04818 313 aa12.7□□□□□ -0.38
CLN6-204ENST00000564752 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
CLN6-204ENST00000564752 TMEM75Q8N9X5 138 aa12.7□□□□□ -0.38
CLN6-204ENST00000564752 RASL10AQ92737 203 aa12.7□□□□□ -0.38
CLN6-204ENST00000564752 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
CLN6-204ENST00000564752 CYTL1Q9NRR1 136 aa12.7□□□□□ -0.38
CLN6-204ENST00000564752 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
CLN6-204ENST00000564752 GCGP01275 180 aa12.69□□□□□ -0.38
CLN6-204ENST00000564752 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
CLN6-204ENST00000564752 CRYBA4P53673 196 aa12.69□□□□□ -0.38
CLN6-204ENST00000564752 FGF8P55075 233 aaPredicted RBP12.69□□□□□ -0.38
CLN6-204ENST00000564752 KRTAP10-2P60368 255 aa12.69□□□□□ -0.38
CLN6-204ENST00000564752 UBE2G2P60604 165 aa12.69□□□□□ -0.38
CLN6-204ENST00000564752 FHL2Q14192 279 aa12.69□□□□□ -0.38
CLN6-204ENST00000564752 HHLA3Q9XRX5 114 aa12.69□□□□□ -0.38
CLN6-204ENST00000564752 M0R2P5 195 aa12.68□□□□□ -0.38
CLN6-204ENST00000564752 IFNA7P01567 189 aa12.68□□□□□ -0.38
CLN6-204ENST00000564752 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
CLN6-204ENST00000564752 ZNF345Q14585 488 aa12.68□□□□□ -0.38
CLN6-204ENST00000564752 SMUG1Q53HV7 270 aa12.68□□□□□ -0.38
CLN6-204ENST00000564752 ZNF479Q96JC4 524 aa12.68□□□□□ -0.38
CLN6-204ENST00000564752 TRAV4A0A0B4J268 109 aa12.67□□□□□ -0.38
CLN6-204ENST00000564752 MAP1LC3B2A6NCE7 125 aa12.67□□□□□ -0.38
CLN6-204ENST00000564752 PFN1P07737 140 aaKnown RBP12.67□□□□□ -0.38
CLN6-204ENST00000564752 PPT1P50897 306 aa12.67□□□□□ -0.38
CLN6-204ENST00000564752 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
CLN6-204ENST00000564752 SAPCD1Q5SSQ6 148 aa12.67□□□□□ -0.38
CLN6-204ENST00000564752 KCNRGQ8N5I3 272 aa12.67□□□□□ -0.38
CLN6-204ENST00000564752 MAP1LC3BQ9GZQ8 125 aa12.67□□□□□ -0.38
CLN6-204ENST00000564752 SIVA1O15304 175 aa12.66□□□□□ -0.38
CLN6-204ENST00000564752 LINC00315P59091 139 aa12.66□□□□□ -0.38
CLN6-204ENST00000564752 MRPL23Q16540 153 aaKnown RBP12.66□□□□□ -0.38
CLN6-204ENST00000564752 Q8N1X5 172 aa12.66□□□□□ -0.38
CLN6-204ENST00000564752 NKX6-2Q9C056 277 aaPredicted RBP12.66□□□□□ -0.38
CLN6-204ENST00000564752 TRAV34A0A0B4J273 112 aa12.65□□□□□ -0.38
CLN6-204ENST00000564752 FAM74A7A6NL05 159 aa12.65□□□□□ -0.38
CLN6-204ENST00000564752 PEX7O00628 323 aa12.65□□□□□ -0.38
CLN6-204ENST00000564752 Q6ZRN7 208 aaPredicted RBP12.65□□□□□ -0.38
CLN6-204ENST00000564752 OR4C5Q8NGB2 326 aa12.65□□□□□ -0.38
CLN6-204ENST00000564752 STOML3Q8TAV4 291 aa12.65□□□□□ -0.38
CLN6-204ENST00000564752 PCNPQ8WW12 178 aaKnown RBP12.65□□□□□ -0.38
CLN6-204ENST00000564752 C11orf21Q9P2W6 132 aa12.65□□□□□ -0.38
CLN6-204ENST00000564752 HIST1H2BAQ96A08 127 aa12.64□□□□□ -0.39
CLN6-204ENST00000564752 LINC00479Q96M42 142 aa12.64□□□□□ -0.39
CLN6-204ENST00000564752 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
CLN6-204ENST00000564752 KANTRA0A1W2PQU2 76 aa12.63□□□□□ -0.39
CLN6-204ENST00000564752 HMSDA8MTL9 139 aa12.63□□□□□ -0.39
CLN6-204ENST00000564752 NXPH4O95158 308 aa12.63□□□□□ -0.39
CLN6-204ENST00000564752 ORM1P02763 201 aa12.63□□□□□ -0.39
CLN6-204ENST00000564752 SRIP30626 198 aa12.63□□□□□ -0.39
CLN6-204ENST00000564752 NEGR1Q7Z3B1 354 aa12.63□□□□□ -0.39
CLN6-204ENST00000564752 Q86TA4 180 aa12.63□□□□□ -0.39
CLN6-204ENST00000564752 OR11H4Q8NGC9 324 aa12.63□□□□□ -0.39
CLN6-204ENST00000564752 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
CLN6-204ENST00000564752 A0A0D9SG52 128 aa12.62□□□□□ -0.39
CLN6-204ENST00000564752 C9JCJ5 164 aa12.62□□□□□ -0.39
CLN6-204ENST00000564752 K7EQD1 137 aa12.62□□□□□ -0.39
CLN6-204ENST00000564752 BCL2L11O43521 198 aa12.62□□□□□ -0.39
CLN6-204ENST00000564752 GYPEP15421 78 aa12.62□□□□□ -0.39
CLN6-204ENST00000564752 ZNF876PQ49A33 203 aa12.62□□□□□ -0.39
CLN6-204ENST00000564752 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
CLN6-204ENST00000564752 SCRT2Q9NQ03 307 aa12.62□□□□□ -0.39
CLN6-204ENST00000564752 SEC11BP0C7V7 166 aa12.61□□□□□ -0.39
CLN6-204ENST00000564752 FHITP49789 147 aa12.61□□□□□ -0.39
CLN6-204ENST00000564752 UMAD1C9J7I0 102 aa12.6□□□□□ -0.39
CLN6-204ENST00000564752 CST9LP1Q5W188 147 aa12.6□□□□□ -0.39
CLN6-204ENST00000564752 FAM213BQ8TBF2 198 aa12.6□□□□□ -0.39
CLN6-204ENST00000564752 C9orf85Q96MD7 179 aa12.6□□□□□ -0.39
CLN6-204ENST00000564752 TXNDC17Q9BRA2 123 aa12.6□□□□□ -0.39
CLN6-204ENST00000564752 UBE2G1P62253 170 aa12.59□□□□□ -0.39
CLN6-204ENST00000564752 EIF5AP63241 154 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms