RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 C17orf112F2Z3M2 114 aa12.44□□□□□ -0.42
NME3-204ENST00000563498 GNRH2O43555 120 aa12.44□□□□□ -0.42
NME3-204ENST00000563498 PLA2G1BP04054 148 aaKnown RBP12.44□□□□□ -0.42
NME3-204ENST00000563498 LAGE3Q14657 143 aa12.44□□□□□ -0.42
NME3-204ENST00000563498 Q9HAA7 133 aa12.44□□□□□ -0.42
NME3-204ENST00000563498 TRAV21A0A0B4J279 112 aa12.43□□□□□ -0.42
NME3-204ENST00000563498 FBLL1A6NHQ2 334 aaKnown RBP12.43□□□□□ -0.42
NME3-204ENST00000563498 KRTAP29-1A8MX34 341 aaPredicted RBP12.43□□□□□ -0.42
NME3-204ENST00000563498 CIDEAO60543 219 aa12.43□□□□□ -0.42
NME3-204ENST00000563498 OR10J3Q5JRS4 329 aa12.43□□□□□ -0.42
NME3-204ENST00000563498 Q6ZSA8 131 aa12.43□□□□□ -0.42
NME3-204ENST00000563498 TYMSP04818 313 aa12.42□□□□□ -0.42
NME3-204ENST00000563498 KHDC3LQ587J8 217 aa12.42□□□□□ -0.42
NME3-204ENST00000563498 ARL6IP6Q8N6S5 226 aa12.42□□□□□ -0.42
NME3-204ENST00000563498 SLC25A29Q8N8R3 303 aa12.42□□□□□ -0.42
NME3-204ENST00000563498 KCNS1Q96KK3 526 aa12.42□□□□□ -0.42
NME3-204ENST00000563498 ATP5SQ99766 215 aa12.42□□□□□ -0.42
NME3-204ENST00000563498 TM2D2Q9BX73 214 aa12.42□□□□□ -0.42
NME3-204ENST00000563498 SDF2L1Q9HCN8 221 aa12.42□□□□□ -0.42
NME3-204ENST00000563498 TRBV6-4A0A1B0GX49 114 aa12.41□□□□□ -0.42
NME3-204ENST00000563498 TAS2R45P59539 299 aa12.41□□□□□ -0.42
NME3-204ENST00000563498 RHOHQ15669 191 aa12.41□□□□□ -0.42
NME3-204ENST00000563498 LELP1Q5T871 98 aa12.41□□□□□ -0.42
NME3-204ENST00000563498 HYLS1Q96M11 299 aa12.41□□□□□ -0.42
NME3-204ENST00000563498 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
NME3-204ENST00000563498 OTORQ9NRC9 128 aa12.41□□□□□ -0.42
NME3-204ENST00000563498 FAM74A1Q5RGS3 127 aa12.4□□□□□ -0.42
NME3-204ENST00000563498 CMTM2Q8TAZ6 248 aa12.4□□□□□ -0.42
NME3-204ENST00000563498 OR5AC2Q9NZP5 309 aa12.4□□□□□ -0.42
NME3-204ENST00000563498 FAM240BA0A1B0GVZ2 78 aa12.39□□□□□ -0.43
NME3-204ENST00000563498 IGHV3-30P01768 117 aa12.39□□□□□ -0.43
NME3-204ENST00000563498 IGHV3-33P01772 117 aa12.39□□□□□ -0.43
NME3-204ENST00000563498 IGHV3-30-3P0DP02 117 aa12.39□□□□□ -0.43
NME3-204ENST00000563498 IGHV3-30-5P0DP03 117 aa12.39□□□□□ -0.43
NME3-204ENST00000563498 LINC00528Q8N1L1 170 aa12.39□□□□□ -0.43
NME3-204ENST00000563498 DEFB104AQ8WTQ1 72 aa12.39□□□□□ -0.43
NME3-204ENST00000563498 ASB13Q8WXK3 278 aa12.39□□□□□ -0.43
NME3-204ENST00000563498 NMES1Q9C002 83 aa12.39□□□□□ -0.43
NME3-204ENST00000563498 PGPA6NDG6 321 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 H0YIZ8 118 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 RS1O15537 224 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 FFAR4Q5NUL3 377 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 CFAP126Q5VTH2 177 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 TVP23CQ96ET8 276 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 CCDC32Q9BV29 185 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 GTSF1LQ9H1H1 148 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 TREM1Q9NP99 234 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 MBD2Q9UBB5 411 aa12.38□□□□□ -0.43
NME3-204ENST00000563498 F6UZH7 168 aa12.37□□□□□ -0.43
NME3-204ENST00000563498 GOLT1AQ6ZVE7 132 aa12.37□□□□□ -0.43
NME3-204ENST00000563498 SH3BGRL3Q9H299 93 aa12.37□□□□□ -0.43
NME3-204ENST00000563498 CYCSP99999 105 aaKnown RBP12.36□□□□□ -0.43
NME3-204ENST00000563498 WFDC2Q14508 124 aa12.36□□□□□ -0.43
NME3-204ENST00000563498 LRRC37A5PQ49AS3 106 aa12.36□□□□□ -0.43
NME3-204ENST00000563498 ATP6V0E2Q8NHE4 81 aa12.36□□□□□ -0.43
NME3-204ENST00000563498 RPH3ALQ9UNE2 315 aa12.36□□□□□ -0.43
NME3-204ENST00000563498 TRAV8-3A0A0A6YYJ7 113 aa12.35□□□□□ -0.43
NME3-204ENST00000563498 TRAV8-1A0A0A6YYK1 113 aa12.35□□□□□ -0.43
NME3-204ENST00000563498 SIX6O95475 246 aa12.35□□□□□ -0.43
NME3-204ENST00000563498 MGST1P10620 155 aaKnown RBP12.35□□□□□ -0.43
NME3-204ENST00000563498 DPPA3Q6W0C5 159 aa12.35□□□□□ -0.43
NME3-204ENST00000563498 PTH2Q96A98 100 aa12.35□□□□□ -0.43
NME3-204ENST00000563498 SERTAD4-AS1Q5TG53 156 aa12.34□□□□□ -0.43
NME3-204ENST00000563498 MZT2BQ6NZ67 158 aa12.34□□□□□ -0.43
NME3-204ENST00000563498 PQLC2Q6ZP29 291 aa12.34□□□□□ -0.43
NME3-204ENST00000563498 IGHV3-73A0A0B4J1V6 119 aa12.33□□□□□ -0.44
NME3-204ENST00000563498 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
NME3-204ENST00000563498 SCGB1C1Q8TD33 95 aa12.33□□□□□ -0.44
NME3-204ENST00000563498 C9orf85Q96MD7 179 aa12.33□□□□□ -0.44
NME3-204ENST00000563498 NDFIP1Q9BT67 221 aa12.33□□□□□ -0.44
NME3-204ENST00000563498 SERTM2A0A1B0GWG4 89 aa12.32□□□□□ -0.44
NME3-204ENST00000563498 HSPB11Q9Y547 144 aa12.32□□□□□ -0.44
NME3-204ENST00000563498 COX11Q9Y6N1 276 aa12.32□□□□□ -0.44
NME3-204ENST00000563498 TAAR5O14804 337 aa12.31□□□□□ -0.44
NME3-204ENST00000563498 EIF3GO75821 320 aaKnown RBP eCLIP12.31□□□□□ -0.44
NME3-204ENST00000563498 GNG5P63218 68 aa12.31□□□□□ -0.44
NME3-204ENST00000563498 ASAH1Q13510 395 aa12.31□□□□□ -0.44
NME3-204ENST00000563498 ZNF506Q5JVG8 444 aa12.31□□□□□ -0.44
NME3-204ENST00000563498 Q8N3U1 123 aa12.31□□□□□ -0.44
NME3-204ENST00000563498 NDUFA13Q9P0J0 144 aa12.31□□□□□ -0.44
NME3-204ENST00000563498 C11orf21Q9P2W6 132 aa12.31□□□□□ -0.44
NME3-204ENST00000563498 HMCN2Q8NDA2 5059 aa12.31□□□□□ -0.44
NME3-204ENST00000563498 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
NME3-204ENST00000563498 ZNF80P51504 273 aaPredicted RBP12.3□□□□□ -0.44
NME3-204ENST00000563498 ACOT6Q3I5F7 207 aaPredicted RBP12.3□□□□□ -0.44
NME3-204ENST00000563498 SCXQ7RTU7 201 aa12.3□□□□□ -0.44
NME3-204ENST00000563498 SYT8Q8NBV8 401 aa12.3□□□□□ -0.44
NME3-204ENST00000563498 PPP1R1CQ8WVI7 109 aa12.3□□□□□ -0.44
NME3-204ENST00000563498 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.29□□□□□ -0.44
NME3-204ENST00000563498 A0A1W2PPV4 95 aa12.29□□□□□ -0.44
NME3-204ENST00000563498 PGPEP1LA6NFU8 196 aa12.29□□□□□ -0.44
NME3-204ENST00000563498 LECT2O14960 151 aa12.29□□□□□ -0.44
NME3-204ENST00000563498 H2BFSP57053 126 aa12.29□□□□□ -0.44
NME3-204ENST00000563498 ZFP2Q6ZN57 461 aa12.29□□□□□ -0.44
NME3-204ENST00000563498 A0A087WWC5 75 aa12.28□□□□□ -0.44
NME3-204ENST00000563498 GGTLC3B5MD39 225 aa12.28□□□□□ -0.44
NME3-204ENST00000563498 GCGP01275 180 aa12.28□□□□□ -0.44
NME3-204ENST00000563498 PET100P0DJ07 73 aa12.28□□□□□ -0.44
NME3-204ENST00000563498 RNASE3P12724 160 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms