RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SPG11Q96JI7 2443 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 LOC107984640A0A0U1RRK4 108 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 FABP5P3A8MUU1 101 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 ZNF736B4DX44 427 aaPredicted RBP3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 IGLL5B9A064 214 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 NPFFO15130 113 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 PIN1P1O15428 100 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 BCL2L11O43521 198 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 ZNF73O43830 326 aaPredicted RBP3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 ZNF737O75373 536 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 SCO1O75880 301 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 HRASP01112 189 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 ZNF688P0C7X2 276 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 NTF3P20783 257 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 EVI2AP22794 236 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 DYNLT3P51808 116 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 LYZP61626 148 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 LSM3P62310 102 aaKnown RBP3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 SP6Q3SY56 376 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 RNASE10Q5GAN6 216 aaKnown RBP3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 VMO1Q7Z5L0 202 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 TCTE3Q8IZS6 198 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 LINC00311Q8N616 119 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 CD177Q8N6Q3 437 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 C14orf178Q8N769 122 aaPredicted RBP3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 FAM216BQ8N7L0 139 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 OR4C16Q8NGL9 310 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 OR5C1Q8NGR4 320 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 OR2T10Q8NGZ9 312 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 DCANP1Q8TF63 244 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 TOMM6Q96B49 74 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 ISOC1Q96CN7 298 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 PYGO2Q9BRQ0 406 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 FKBP11Q9NYL4 201 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 ZNF222Q9UK12 451 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 RTTNQ86VV8 2226 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 TENM4Q6N022 2769 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 ARFGEF3Q5TH69 2177 aa3.57□□□□□ -1.84
VPS35P1-201ENST00000563400 IGLV11-55A0A075B6I3 123 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 IGHV3-49A0A0A0MS15 119 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 TRAV40A0A0B4J280 105 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 I3L521 148 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 J3QQQ9 107 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 IGKV1-5P01602 117 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 SCTP09683 121 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 LINC00869P0C866 280 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 CGB3P0DN86 165 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 CGB7P0DN87 165 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 ELK1P19419 428 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 RAB5CP51148 216 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 ZNF80P51504 273 aaPredicted RBP3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 NCS1P62166 190 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 RPL36AP83881 106 aaKnown RBP3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 HES1Q14469 280 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 PLGLAQ15195 96 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 PIGYQ3MUY2 71 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 Q6P435 159 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 ADM2Q7Z4H4 148 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 C6orf201Q7Z4U5 140 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 TOMM5Q8N4H5 51 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 C15orf56Q8N910 161 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 Q8N976 141 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 OR4S1Q8NGB4 309 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 CIRBP-AS1Q8TBR5 109 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 NARS2Q96I59 477 aaKnown RBP3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 ARHGAP5-AS1Q96IT6 56 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 C1orf147Q96MC9 270 aaPredicted RBP3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 B9D2Q9BPU9 175 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 SLC25A21Q9BQT8 299 aaPredicted RBP3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 PDCD10Q9BUL8 212 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 IMUPQ9GZP8 106 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 OTORQ9NRC9 128 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 ANKRD17O75179 2603 aaKnown RBP3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 HECTD1Q9ULT8 2610 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 HIVEP2P31629 2446 aa3.56□□□□□ -1.84
VPS35P1-201ENST00000563400 C9JCJ5 164 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 BUB1B-PAK6H3BSN5 160 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 NAPSAO96009 420 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 MT-ND4LP03901 98 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 TRGC2P03986 189 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 AKAIN1P0CW23 69 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 CHD3Q12873 2000 aaKnown RBP3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 VMA21Q3ZAQ7 101 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 PYDC2Q56P42 97 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 OCIAD2Q56VL3 154 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 SCXQ7RTU7 201 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 LYG1Q8N1E2 194 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 DAND5Q8N907 189 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 PRADC1Q9BSG0 188 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 ZNF586Q9NXT0 402 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 BSNQ9UPA5 3926 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 COL12A1Q99715 3063 aa3.55□□□□□ -1.84
VPS35P1-201ENST00000563400 A8MWL6 223 aa3.54□□□□□ -1.84
VPS35P1-201ENST00000563400 C1orf196B1AJZ1 125 aa3.54□□□□□ -1.84
VPS35P1-201ENST00000563400 C11orf94C9JXX5 98 aa3.54□□□□□ -1.84
VPS35P1-201ENST00000563400 F6UZH7 168 aa3.54□□□□□ -1.84
VPS35P1-201ENST00000563400 H7C423 109 aa3.54□□□□□ -1.84
VPS35P1-201ENST00000563400 ZNF324O75467 553 aaPredicted RBP3.54□□□□□ -1.84
VPS35P1-201ENST00000563400 SNAPC5O75971 98 aa3.54□□□□□ -1.84
VPS35P1-201ENST00000563400 SRP19P09132 144 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms