RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ANKRD20A5PA0PJZ0 165 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 PRSS1P07477 247 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 OR10J4P0C629 311 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 SMIM18P0DKX4 95 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 PYYP10082 97 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 VBP1P61758 197 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 MRPS10P82664 201 aaKnown RBP4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 PDE6HQ13956 83 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 FFAR4Q5NUL3 377 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 DGAT2L7PQ6IED9 249 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 WDR73Q6P4I2 378 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 C15orf40Q8WUR7 153 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 SMIM8Q96KF7 97 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 SCGB3A2Q96PL1 93 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 SOSTQ9BQB4 213 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 TMEM14CQ9P0S9 112 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 Q9UF83 564 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 KLK12Q9UKR0 248 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 KIF25-AS1Q9Y6Z4 181 aa4.86□□□□□ -1.63
HERPUD1-206ENST00000563343 IGHV3-73A0A0B4J1V6 119 aa4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 PHOX2AO14813 284 aa4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 TYMSP04818 313 aa4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 HIST1H1EP10412 219 aaKnown RBP4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 TMEM128Q5BJH2 165 aa4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 MIC13Q5XKP0 118 aa4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 FAM159AQ6UWV7 190 aa4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 UBE2WQ96B02 151 aa4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 MGAT4CQ9UBM8 478 aa4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 SCP2D1Q9UJQ7 156 aa4.85□□□□□ -1.63
HERPUD1-206ENST00000563343 A0A087WYN8 130 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 A0A0U1RQV1 116 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 CCDC160A6NGH7 325 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 USP17L23D6RBM5 183 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 CTDSPLO15194 276 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 CIDEAO60543 219 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 HOXB5P09067 269 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 SRSF3P84103 164 aaKnown RBP4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 CYB561D1Q8N8Q1 229 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 ZC2HC1AQ96GY0 325 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 C2orf50Q96LR7 162 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 OR51M1Q9H341 326 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 TIMM9Q9Y5J7 89 aa4.84□□□□□ -1.63
HERPUD1-206ENST00000563343 RBAKDNA6NC62 111 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 C5orf51A6NDU8 294 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 GAGE12JA6NER3 117 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 SSSCA1O60232 199 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 TSC22D2O75157 780 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 SFT2D2O95562 160 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 CHTF8P0CG12 524 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 MGST1P10620 155 aaKnown RBP4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 CAMLGP49069 296 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 INPP1P49441 399 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 CAV2P51636 162 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 PRR3P79522 188 aaKnown RBP4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 RPL19P84098 196 aaKnown RBP4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 GAGE1Q13065 139 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 GAGE4Q13068 117 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 GAGE5Q13069 117 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 PPP1R1AQ13522 171 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 GAGE13Q4V321 117 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 KRTAP26-1Q6PEX3 210 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 ENHOQ6UWT2 76 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 Q6ZRG5 221 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 NRARPQ7Z6K4 114 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 OR10G9Q8NGN4 311 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 OR1L4Q8NGR5 311 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 SPACA4Q8TDM5 124 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 RNF185Q96GF1 192 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 PFDN5Q99471 154 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 GGACTQ9BVM4 153 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 FUNDC2Q9BWH2 189 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 SH3BGRL3Q9H299 93 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 AAMDCQ9H7C9 122 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 LENEPQ9Y5L5 61 aa4.83□□□□□ -1.64
HERPUD1-206ENST00000563343 A0A087WWC5 75 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 SEC11BP0C7V7 166 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 TMBIM6P55061 237 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 RAB31Q13636 194 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 ZNF876PQ49A33 203 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 C12orf45Q8N5I9 185 aaPredicted RBP4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 AP3S1Q92572 193 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 FAM167A-AS1Q96KT0 104 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 LINC00479Q96M42 142 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 CHCHD7Q9BUK0 85 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 SLC25A2Q9BXI2 301 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 SAMD10Q9BYL1 202 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 NAGKQ9UJ70 344 aa4.82□□□□□ -1.64
HERPUD1-206ENST00000563343 PGPEP1LA6NFU8 196 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 DIRC3C9JPN6 131 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 CTDSP2O14595 271 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 PFDN1O60925 122 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 MALP21145 153 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 RPL29P47914 159 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 LINC00310P59036 64 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 TAS2R30P59541 319 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 Q0VG73 95 aa4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 SRSF9Q13242 221 aaKnown RBP eCLIP4.81□□□□□ -1.64
HERPUD1-206ENST00000563343 PTH2Q96A98 100 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms