RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 C8orf49Q96NF6 230 aa10.8□□□□□ -0.68
RABGGTA-220ENST00000560998 TMEM160Q9NX00 188 aa10.8□□□□□ -0.68
RABGGTA-220ENST00000560998 ABCA1O95477 2261 aa10.8□□□□□ -0.68
RABGGTA-220ENST00000560998 TRAV40A0A0B4J280 105 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 TNFRSF6BO95407 300 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 ZNF688P0C7X2 276 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 GNLYP22749 145 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 EFNA4P52798 201 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 MINOS1Q5TGZ0 78 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 SBSPONQ8IVN8 264 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 MYOZ3Q8TDC0 251 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 RASL11BQ9BPW5 248 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 SIRPDQ9H106 197 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 MRPL35Q9NZE8 188 aaKnown RBP10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 MINOS1-NBL1R4GNA1 71 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 TRBV20-1A0A075B6N2 111 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 TRAV12-1A0A0B4J245 112 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 C19orf84I3L1E1 186 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 SRD5A1P18405 259 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 UBE2D3P61077 147 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 UBE2D2P62837 147 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 Q8N6K4 173 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 AAMDCQ9H7C9 122 aa10.79□□□□□ -0.68
RABGGTA-220ENST00000560998 K7EMI3 77 aa10.78□□□□□ -0.68
RABGGTA-220ENST00000560998 PPIFP30405 207 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-220ENST00000560998 CITED1Q99966 193 aa10.78□□□□□ -0.68
RABGGTA-220ENST00000560998 TMSB15BA0A087X1C1 80 aa10.77□□□□□ -0.68
RABGGTA-220ENST00000560998 PRSS29PA6NIE9 313 aa10.77□□□□□ -0.68
RABGGTA-220ENST00000560998 M0QXV9 152 aa10.77□□□□□ -0.68
RABGGTA-220ENST00000560998 EBI3Q14213 229 aa10.77□□□□□ -0.68
RABGGTA-220ENST00000560998 TRBV7-9A0A0J9YWB2 115 aa10.77□□□□□ -0.69
RABGGTA-220ENST00000560998 UBE2D1P51668 147 aa10.77□□□□□ -0.69
RABGGTA-220ENST00000560998 GLMPQ8WWB7 406 aa10.77□□□□□ -0.69
RABGGTA-220ENST00000560998 RAX2Q96IS3 184 aa10.77□□□□□ -0.69
RABGGTA-220ENST00000560998 CARD19Q96LW7 228 aa10.77□□□□□ -0.69
RABGGTA-220ENST00000560998 IGLV2-18A0A075B6J9 118 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 MRPS12O15235 138 aaKnown RBP10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 ASIPP42127 132 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 NDPQ00604 133 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 UFC1Q9Y3C8 167 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 IGLV11-55A0A075B6I3 123 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 A8MWV9 139 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 F8VRH5 84 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 H7C1H1 209 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 RHODO00212 210 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 PSMB2P49721 201 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 FANCD2OSQ96PS1 177 aa10.76□□□□□ -0.69
RABGGTA-220ENST00000560998 WNK2Q9Y3S1 2297 aa10.75□□□□□ -0.69
RABGGTA-220ENST00000560998 B5MCH6 92 aa10.75□□□□□ -0.69
RABGGTA-220ENST00000560998 EGR2P11161 476 aaPredicted RBP10.75□□□□□ -0.69
RABGGTA-220ENST00000560998 LMO4P61968 165 aa10.75□□□□□ -0.69
RABGGTA-220ENST00000560998 LAGE3Q14657 143 aa10.75□□□□□ -0.69
RABGGTA-220ENST00000560998 Q6Q795 121 aa10.75□□□□□ -0.69
RABGGTA-220ENST00000560998 C17orf77Q96MU5 243 aa10.75□□□□□ -0.69
RABGGTA-220ENST00000560998 ZNF491Q8N8L2 437 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 AJUBAQ96IF1 538 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 PRR25Q96S07 402 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 ASCL2Q99929 193 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 BPESC1Q9GZL8 116 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 GAGE12JA6NER3 117 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 GAGE7O76087 117 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 IGHG4P01861 327 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 GAGE12FP0CL80 117 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 GAGE12GP0CL81 117 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 GAGE12IP0CL82 117 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 UBE2E1P51965 193 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 GAGE4Q13068 117 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 S4R3C0 116 aa10.74□□□□□ -0.69
RABGGTA-220ENST00000560998 LINC01549A6NIU2 74 aa10.73□□□□□ -0.69
RABGGTA-220ENST00000560998 LGALS1P09382 135 aaKnown RBP10.73□□□□□ -0.69
RABGGTA-220ENST00000560998 MFAP4P55083 255 aa10.73□□□□□ -0.69
RABGGTA-220ENST00000560998 RNF125Q96EQ8 232 aa10.73□□□□□ -0.69
RABGGTA-220ENST00000560998 F8W735 103 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 M0R3E3 92 aa10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 NHLRC4P0CG21 123 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 Q8N9W7 124 aa10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 IGHV7-81A0A0B4J1V7 117 aa10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 LOC107984156A0A0G2JMH3 177 aa10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 SLC25A16P16260 332 aa10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 NDUFV3P56181 108 aaKnown RBP10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 TMEM78Q5T7P6 136 aa10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 SHISA2Q6UWI4 295 aa10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 ARL17AQ8IVW1 177 aa10.72□□□□□ -0.69
RABGGTA-220ENST00000560998 MED13LQ71F56 2210 aa10.71□□□□□ -0.69
RABGGTA-220ENST00000560998 GAGE2BQ13066 116 aa10.71□□□□□ -0.69
RABGGTA-220ENST00000560998 GAGE2EQ4V326 116 aa10.71□□□□□ -0.69
RABGGTA-220ENST00000560998 C21orf62Q9NYP8 219 aa10.71□□□□□ -0.69
RABGGTA-220ENST00000560998 GAGE2DQ9UEU5 116 aa10.71□□□□□ -0.69
RABGGTA-220ENST00000560998 CENPVL3A0A0U1RRI6 287 aa10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 SNCGO76070 127 aa10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 IGHV4-39P01824 125 aa10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 SAA4P35542 130 aa10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 IL17RELQ6ZVW7 336 aa10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 CACNA1AO00555 2505 aa10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 HERV-K104P63124 156 aa10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 ANKRD29Q8N6D5 301 aa10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 PSMG3-AS1Q96PY0 264 aa10.7□□□□□ -0.7
RABGGTA-220ENST00000560998 PTH2Q96A98 100 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 528 ms