RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CFAP161Q6P656 301 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 RCHY1Q96PM5 261 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 PPP1R14DQ9NXH3 145 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 TRAV12-3A0A0B4J271 114 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 A0A0J9YX75 114 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 FAM231BA6NCW3 169 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 GNRH2O43555 120 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 NDUFA7O95182 113 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 MT-ND6P03923 174 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 LINC00310P59036 64 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 TWIST1Q15672 202 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 ATP5L2Q7Z4Y8 100 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 OR10D4PQ8NGN7 298 aa8.1□□□□□ -1.11
SNRPA1-211ENST00000560433 SAP30O75446 220 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 ANXA2RQ3ZCQ2 193 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 LINC01559Q495D7 138 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 BAGE3Q86Y29 109 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 FAM19A4Q96LR4 140 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 H3BVH4 76 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 SERF1AO75920 110 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 EBLN2Q6P2I7 272 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 SPATA3Q8NHX4 192 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 HIST1H2BLQ99880 126 aa8.09□□□□□ -1.11
SNRPA1-211ENST00000560433 MAST4O15021 2626 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 PRM2P04554 102 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 IGLC6P0CF74 106 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 OR10AG1Q8NH19 301 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 AMBPP02760 352 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 HTN1P15515 57 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 RIGQ13278 110 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 RASL11AQ6T310 242 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 BORCS7Q96B45 105 aa8.08□□□□□ -1.12
SNRPA1-211ENST00000560433 TRAV21A0A0B4J279 112 aa8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 COX19Q49B96 90 aa8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 CDPF1Q6NVV7 123 aa8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 ALKBH7Q9BT30 221 aaPredicted RBP8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 FBN1P35555 2871 aaKnown RBP8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 SMKR1H3BMG3 65 aa8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 C18orf32Q8TCD1 76 aa8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 PACRGQ96M98 296 aaPredicted RBP8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 MAP6D1Q9H9H5 199 aa8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 ZNF256Q9Y2P7 627 aaPredicted RBP8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 LENEPQ9Y5L5 61 aa8.07□□□□□ -1.12
SNRPA1-211ENST00000560433 GAS8-AS1O95177 125 aa8.06□□□□□ -1.12
SNRPA1-211ENST00000560433 RPS20P60866 119 aaKnown RBP8.06□□□□□ -1.12
SNRPA1-211ENST00000560433 COA6Q5JTJ3 125 aaKnown RBP8.06□□□□□ -1.12
SNRPA1-211ENST00000560433 FAM19A2Q8N3H0 131 aa8.06□□□□□ -1.12
SNRPA1-211ENST00000560433 C12orf57Q99622 126 aa8.06□□□□□ -1.12
SNRPA1-211ENST00000560433 WFDC10AQ9H1F0 79 aa8.06□□□□□ -1.12
SNRPA1-211ENST00000560433 LOC102724200A0A096LPH7 203 aaPredicted RBP8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 KLLNB2CW77 178 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 S100A4P26447 101 aaKnown RBP8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 CTRLP40313 264 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 SAMD13Q5VXD3 122 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 Q6AWC8 147 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 LINC00518Q8N0U6 118 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 RBMY1BA6NDE4 496 aaKnown RBP8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 RBMY1EA6NEQ0 496 aaKnown RBP8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 M0R381 172 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 NCR2O95944 276 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 RBMY1DP0C7P1 496 aaKnown RBP8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 EVI2AP22794 236 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 MUC4Q99102 2169 aa8.05□□□□□ -1.12
SNRPA1-211ENST00000560433 PF4P02776 101 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 PMCHP20382 165 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 CDKN1BP46527 198 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 ODF3L2Q3SX64 289 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 PYY3Q5JQD4 70 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 SPANXN1Q5VSR9 72 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 FOXI2Q6ZQN5 318 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 D6R8Y8 96 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 H3BMM0 161 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 ZNF324O75467 553 aaPredicted RBP8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 CD7P09564 240 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 RBMY1A1P0DJD3 496 aaKnown RBP8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 RBMY1CP0DJD4 496 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 Q0VG73 95 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 RBMY1FQ15415 496 aaKnown RBP8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 FAM159AQ6UWV7 190 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 AMTNQ6UX39 209 aa8.04□□□□□ -1.12
SNRPA1-211ENST00000560433 C7orf71A4D174 169 aa8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 RNASEKQ6P5S7 137 aaKnown RBP8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 TRAV26-2A0A0B4J265 109 aa8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 LOC389332A0A1B0GUA5 103 aa8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 OR4C46A6NHA9 309 aa8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 PCP4L1A6NKN8 68 aa8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 RNASE3P12724 160 aaKnown RBP8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 GATA1P15976 413 aaPredicted RBP8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 MRPL51Q4U2R6 128 aaKnown RBP8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 OR10J3Q5JRS4 329 aa8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 URB1-AS1Q96HZ7 61 aa8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 SPAG8Q99932 426 aaPredicted RBP8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 SAMD10Q9BYL1 202 aa8.03□□□□□ -1.12
SNRPA1-211ENST00000560433 HLA-DRB4P13762 266 aa8.02□□□□□ -1.13
SNRPA1-211ENST00000560433 DMRTA1Q5VZB9 504 aa8.02□□□□□ -1.13
SNRPA1-211ENST00000560433 FAM104BQ5XKR9 115 aa8.02□□□□□ -1.13
SNRPA1-211ENST00000560433 NDUFA11Q86Y39 141 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 230.7 ms