RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 SUN5Q8TC36 379 aa14.25□□□□□ -0.13
HIF1A-206ENST00000553999 CYTL1Q9NRR1 136 aa14.25□□□□□ -0.13
HIF1A-206ENST00000553999 HHLA3Q9XRX5 114 aa14.25□□□□□ -0.13
HIF1A-206ENST00000553999 C9JCJ5 164 aa14.24□□□□□ -0.13
HIF1A-206ENST00000553999 H3BNG1 76 aa14.24□□□□□ -0.13
HIF1A-206ENST00000553999 IGLV2-11P01706 119 aa14.24□□□□□ -0.13
HIF1A-206ENST00000553999 CRYBA4P53673 196 aa14.24□□□□□ -0.13
HIF1A-206ENST00000553999 CYB561D1Q8N8Q1 229 aa14.24□□□□□ -0.13
HIF1A-206ENST00000553999 C11orf21Q9P2W6 132 aa14.24□□□□□ -0.13
HIF1A-206ENST00000553999 PRO0255Q9UI72 69 aa14.24□□□□□ -0.13
HIF1A-206ENST00000553999 MRPS16Q9Y3D3 137 aaKnown RBP14.24□□□□□ -0.13
HIF1A-206ENST00000553999 HECTD4Q9Y4D8 3996 aa14.24□□□□□ -0.13
HIF1A-206ENST00000553999 A0A1B0GV50 99 aa14.23□□□□□ -0.13
HIF1A-206ENST00000553999 MAP1LC3B2A6NCE7 125 aa14.23□□□□□ -0.13
HIF1A-206ENST00000553999 ZNF575Q86XF7 245 aa14.23□□□□□ -0.13
HIF1A-206ENST00000553999 SPXQ9BT56 116 aa14.23□□□□□ -0.13
HIF1A-206ENST00000553999 MAP1LC3BQ9GZQ8 125 aa14.23□□□□□ -0.13
HIF1A-206ENST00000553999 DNAH2Q9P225 4427 aa14.23□□□□□ -0.13
HIF1A-206ENST00000553999 MUC4Q99102 2169 aa14.23□□□□□ -0.13
HIF1A-206ENST00000553999 SERTM2A0A1B0GWG4 89 aa14.22□□□□□ -0.13
HIF1A-206ENST00000553999 FHITP49789 147 aa14.22□□□□□ -0.13
HIF1A-206ENST00000553999 ZFP69Q49AA0 526 aa14.22□□□□□ -0.13
HIF1A-206ENST00000553999 ARL6IP6Q8N6S5 226 aa14.22□□□□□ -0.13
HIF1A-206ENST00000553999 M0R2P5 195 aa14.21□□□□□ -0.13
HIF1A-206ENST00000553999 TDRG1Q3Y452 100 aa14.21□□□□□ -0.13
HIF1A-206ENST00000553999 OR4C5Q8NGB2 326 aa14.21□□□□□ -0.13
HIF1A-206ENST00000553999 OR11H4Q8NGC9 324 aa14.21□□□□□ -0.13
HIF1A-206ENST00000553999 LOC100131303A0A0U1RQF7 123 aa14.2□□□□□ -0.14
HIF1A-206ENST00000553999 TAAR5O14804 337 aa14.2□□□□□ -0.14
HIF1A-206ENST00000553999 NXPH4O95158 308 aa14.2□□□□□ -0.14
HIF1A-206ENST00000553999 GYPEP15421 78 aa14.2□□□□□ -0.14
HIF1A-206ENST00000553999 SMUG1Q53HV7 270 aa14.2□□□□□ -0.14
HIF1A-206ENST00000553999 RASL10AQ92737 203 aa14.2□□□□□ -0.14
HIF1A-206ENST00000553999 ARL2-SNX15V9GYD0 113 aa14.2□□□□□ -0.14
HIF1A-206ENST00000553999 FAT2Q9NYQ8 4349 aa14.19□□□□□ -0.14
HIF1A-206ENST00000553999 IGHV3-73A0A0B4J1V6 119 aa14.19□□□□□ -0.14
HIF1A-206ENST00000553999 A0A1W2PRE2 83 aa14.19□□□□□ -0.14
HIF1A-206ENST00000553999 PEX7O00628 323 aa14.19□□□□□ -0.14
HIF1A-206ENST00000553999 PCNPQ8WW12 178 aaKnown RBP14.19□□□□□ -0.14
HIF1A-206ENST00000553999 KCNS1Q96KK3 526 aa14.19□□□□□ -0.14
HIF1A-206ENST00000553999 UPK3BQ9BT76 320 aa14.19□□□□□ -0.14
HIF1A-206ENST00000553999 TRAV4A0A0B4J268 109 aa14.18□□□□□ -0.14
HIF1A-206ENST00000553999 FAM74A7A6NL05 159 aa14.18□□□□□ -0.14
HIF1A-206ENST00000553999 PFN1P07737 140 aaKnown RBP14.18□□□□□ -0.14
HIF1A-206ENST00000553999 Q86TA4 180 aa14.18□□□□□ -0.14
HIF1A-206ENST00000553999 KCNRGQ8N5I3 272 aa14.18□□□□□ -0.14
HIF1A-206ENST00000553999 ZNF471Q9BX82 626 aaPredicted RBP14.18□□□□□ -0.14
HIF1A-206ENST00000553999 DNAH17Q9UFH2 4485 aa14.17□□□□□ -0.14
HIF1A-206ENST00000553999 K7EQD1 137 aa14.17□□□□□ -0.14
HIF1A-206ENST00000553999 SRIP30626 198 aa14.17□□□□□ -0.14
HIF1A-206ENST00000553999 MRPL23Q16540 153 aaKnown RBP14.17□□□□□ -0.14
HIF1A-206ENST00000553999 TTC32Q5I0X7 151 aa14.17□□□□□ -0.14
HIF1A-206ENST00000553999 CST9LP1Q5W188 147 aa14.17□□□□□ -0.14
HIF1A-206ENST00000553999 FAM213BQ8TBF2 198 aa14.17□□□□□ -0.14
HIF1A-206ENST00000553999 PPT1P50897 306 aa14.16□□□□□ -0.14
HIF1A-206ENST00000553999 SLAQ13239 276 aa14.16□□□□□ -0.14
HIF1A-206ENST00000553999 DPPA3Q6W0C5 159 aa14.16□□□□□ -0.14
HIF1A-206ENST00000553999 SIVA1O15304 175 aa14.15□□□□□ -0.14
HIF1A-206ENST00000553999 ZNF876PQ49A33 203 aa14.15□□□□□ -0.14
HIF1A-206ENST00000553999 LYPD5Q6UWN5 251 aa14.15□□□□□ -0.14
HIF1A-206ENST00000553999 NEGR1Q7Z3B1 354 aa14.15□□□□□ -0.14
HIF1A-206ENST00000553999 KANTRA0A1W2PQU2 76 aa14.14□□□□□ -0.15
HIF1A-206ENST00000553999 M0R036 132 aa14.14□□□□□ -0.15
HIF1A-206ENST00000553999 BCL2L11O43521 198 aa14.14□□□□□ -0.15
HIF1A-206ENST00000553999 SAPCD1Q5SSQ6 148 aa14.14□□□□□ -0.15
HIF1A-206ENST00000553999 NHLRC2Q8NBF2 726 aa14.14□□□□□ -0.15
HIF1A-206ENST00000553999 PGPEP1LA6NFU8 196 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 FBLL1A6NHQ2 334 aaKnown RBP14.13□□□□□ -0.15
HIF1A-206ENST00000553999 PFDN1O60925 122 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 LINC00315P59091 139 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 ZNF345Q14585 488 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 ZNF506Q5JVG8 444 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 WFDC10BQ8IUB3 73 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 STOML3Q8TAV4 291 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 SFT2D1Q8WV19 159 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 ZC2HC1AQ96GY0 325 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 C9orf85Q96MD7 179 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 TNFRSF18Q9Y5U5 241 aa14.13□□□□□ -0.15
HIF1A-206ENST00000553999 IGKV3D-20A0A0C4DH25 116 aa14.12□□□□□ -0.15
HIF1A-206ENST00000553999 PAGE4O60829 102 aa14.12□□□□□ -0.15
HIF1A-206ENST00000553999 S100A4P26447 101 aaKnown RBP14.12□□□□□ -0.15
HIF1A-206ENST00000553999 UBE2G1P62253 170 aa14.12□□□□□ -0.15
HIF1A-206ENST00000553999 TMSB15BA0A087X1C1 80 aa14.11□□□□□ -0.15
HIF1A-206ENST00000553999 GRIFINA4D1Z8 144 aa14.11□□□□□ -0.15
HIF1A-206ENST00000553999 ORM1P02763 201 aa14.11□□□□□ -0.15
HIF1A-206ENST00000553999 RNASE3P12724 160 aaKnown RBP14.11□□□□□ -0.15
HIF1A-206ENST00000553999 AKR1C3P42330 323 aa14.11□□□□□ -0.15
HIF1A-206ENST00000553999 CFAP126Q5VTH2 177 aa14.11□□□□□ -0.15
HIF1A-206ENST00000553999 A0A0D9SG52 128 aa14.1□□□□□ -0.15
HIF1A-206ENST00000553999 C16orf90A8MZG2 172 aa14.1□□□□□ -0.15
HIF1A-206ENST00000553999 H3BVH4 76 aa14.1□□□□□ -0.15
HIF1A-206ENST00000553999 SH2D1AO60880 128 aa14.1□□□□□ -0.15
HIF1A-206ENST00000553999 GATA1P15976 413 aaPredicted RBP14.1□□□□□ -0.15
HIF1A-206ENST00000553999 HIST1H2BAQ96A08 127 aa14.1□□□□□ -0.15
HIF1A-206ENST00000553999 HMSDA8MTL9 139 aa14.09□□□□□ -0.15
HIF1A-206ENST00000553999 FABP5P3A8MUU1 101 aa14.09□□□□□ -0.15
HIF1A-206ENST00000553999 B4DEV8 164 aa14.09□□□□□ -0.15
HIF1A-206ENST00000553999 RS1O15537 224 aa14.09□□□□□ -0.15
HIF1A-206ENST00000553999 ASIPP42127 132 aa14.09□□□□□ -0.15
HIF1A-206ENST00000553999 TMUB2Q71RG4 321 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms