RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 RAB14P61106 215 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 UBE2G1P62253 170 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 ZNF506Q5JVG8 444 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 Q6AWC8 147 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 COX8CQ7Z4L0 72 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 PRNTQ86SH4 94 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 PYGO2Q9BRQ0 406 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 TMEM208Q9BTX3 173 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 TREM1Q9NP99 234 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 CELA1Q9UNI1 258 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 UBR4Q5T4S7 5183 aa5.48□□□□□ -1.53
ABCD4-220ENST00000553998 IGHV3OR16-12A0A075B7B8 117 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 TRAV34A0A0B4J273 112 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 TRAV21A0A0B4J279 112 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 TMEM250H0YL14 139 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 J3KRW8 73 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 ZNF324O75467 553 aaPredicted RBP5.47□□□□□ -1.53
ABCD4-220ENST00000553998 LTAP01374 205 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 RNASE4P34096 147 aaKnown RBP5.47□□□□□ -1.53
ABCD4-220ENST00000553998 BTN1A1Q13410 526 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 KIR3DS1Q14943 382 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 RRN3P1Q2M238 152 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 SMUG1Q53HV7 270 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 ZNF493Q6ZR52 646 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 Q86TA4 180 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 TVP23CQ96ET8 276 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 SGK494Q96LW2 274 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 LINC00479Q96M42 142 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 FAM210AQ96ND0 272 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 LINC01587Q99440 93 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 SCRT2Q9NQ03 307 aa5.47□□□□□ -1.53
ABCD4-220ENST00000553998 VPS13BQ7Z7G8 4022 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 IGLV2-18A0A075B6J9 118 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 TRAV12-3A0A0B4J271 114 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 TEX48A0A1B0GUV7 120 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 PFN1P07737 140 aaKnown RBP5.46□□□□□ -1.54
ABCD4-220ENST00000553998 FAM3BP58499 235 aaPredicted RBP5.46□□□□□ -1.54
ABCD4-220ENST00000553998 TNP2Q05952 138 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 ANXA2RQ3ZCQ2 193 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 TOR2AQ5JU69 321 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 CLLU1Q5K131 121 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 PRR9Q5T870 116 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 BAGE2Q86Y30 109 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 TMEM183AQ8IXX5 376 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 SMIM12Q96EX1 92 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 EIF5A2Q9GZV4 153 aaKnown RBP5.46□□□□□ -1.54
ABCD4-220ENST00000553998 SMDT1Q9H4I9 107 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 MED9Q9NWA0 146 aa5.46□□□□□ -1.54
ABCD4-220ENST00000553998 DMBT1Q9UGM3 2413 aaPredicted RBP5.46□□□□□ -1.54
ABCD4-220ENST00000553998 IGHV1OR15-1A0A075B7D0 117 aa5.45□□□□□ -1.54
ABCD4-220ENST00000553998 ZNF705GA8MUZ8 300 aaPredicted RBP5.45□□□□□ -1.54
ABCD4-220ENST00000553998 RGS13O14921 159 aa5.45□□□□□ -1.54
ABCD4-220ENST00000553998 GCGP01275 180 aa5.45□□□□□ -1.54
ABCD4-220ENST00000553998 RPL35P42766 123 aaKnown RBP5.45□□□□□ -1.54
ABCD4-220ENST00000553998 IFITM2Q01629 132 aa5.45□□□□□ -1.54
ABCD4-220ENST00000553998 PEA15Q15121 130 aa5.45□□□□□ -1.54
ABCD4-220ENST00000553998 TDRG1Q3Y452 100 aa5.45□□□□□ -1.54
ABCD4-220ENST00000553998 EIF4E3Q8N5X7 224 aaKnown RBP5.45□□□□□ -1.54
ABCD4-220ENST00000553998 TMEM263Q8WUH6 116 aaKnown RBP5.45□□□□□ -1.54
ABCD4-220ENST00000553998 C16orf74Q96GX8 76 aa5.45□□□□□ -1.54
ABCD4-220ENST00000553998 MLST8Q9BVC4 326 aa5.45□□□□□ -1.54
ABCD4-220ENST00000553998 NACAE9PAV3 2078 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 TRGV11A0A075B6L2 103 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 FABP5P3A8MUU1 101 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 IBA57Q5T440 356 aaKnown RBP5.44□□□□□ -1.54
ABCD4-220ENST00000553998 FAM162BQ5T6X4 162 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 FAM159AQ6UWV7 190 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 UBE2DNLQ8IWF7 75 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 RNASE8Q8TDE3 154 aaKnown RBP5.44□□□□□ -1.54
ABCD4-220ENST00000553998 PCNPQ8WW12 178 aaKnown RBP5.44□□□□□ -1.54
ABCD4-220ENST00000553998 KCNS1Q96KK3 526 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 C8orf49Q96NF6 230 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 DERL1Q9BUN8 251 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 BIN3Q9NQY0 253 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 TP53TG3Q9ULZ0 132 aa5.44□□□□□ -1.54
ABCD4-220ENST00000553998 RAB19A4D1S5 217 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 CBY3A6NI87 242 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 LYRM9A8MSI8 78 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 C9JCJ5 164 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 SRP19P09132 144 aaKnown RBP5.43□□□□□ -1.54
ABCD4-220ENST00000553998 SPART-AS1P0CW21 52 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 HTN1P15515 57 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 AZU1P20160 251 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 GNG4P50150 75 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 ZNF80P51504 273 aaPredicted RBP5.43□□□□□ -1.54
ABCD4-220ENST00000553998 DAZ2Q13117 558 aaKnown RBP5.43□□□□□ -1.54
ABCD4-220ENST00000553998 ZNF674Q2M3X9 581 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 CENPWQ5EE01 88 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 ZC2HC1AQ96GY0 325 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 PARLQ9H300 379 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 SDF2L1Q9HCN8 221 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 TIMM8BQ9Y5J9 83 aaPredicted RBP5.43□□□□□ -1.54
ABCD4-220ENST00000553998 LY96Q9Y6Y9 160 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
ABCD4-220ENST00000553998 TRBV20OR9-2A0A075B6H5 130 aa5.42□□□□□ -1.54
ABCD4-220ENST00000553998 PLAC8L1A1L4L8 177 aa5.42□□□□□ -1.54
ABCD4-220ENST00000553998 SNURFLB1AK76 121 aa5.42□□□□□ -1.54
ABCD4-220ENST00000553998 SH2D1AO60880 128 aa5.42□□□□□ -1.54
ABCD4-220ENST00000553998 CRIP1P50238 77 aa5.42□□□□□ -1.54
ABCD4-220ENST00000553998 EMP1P54849 157 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms