RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 KCNIP2Q9NS61 270 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 TVP23BQ9NYZ1 205 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 HIGD1AQ9Y241 93 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 MED31Q9Y3C7 131 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 S4R3C0 116 aa3.14□□□□□ -1.91
CPSF6-206ENST00000550987 ARHGAP32A7KAX9 2087 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 TMED7-TICAM2A0A0A6YYA0 188 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 TRAV4A0A0B4J268 109 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 A0A0J9YW62 118 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 TMEM218A2RU14 115 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 CLPSL1A2RUU4 121 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 B4DSR2 109 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 TMEM250H0YL14 139 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 RPL36A-HNRNPH2H7BZ11 118 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 K7ERS5 55 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 GSTZ1O43708 216 aaPredicted RBP3.13□□□□□ -1.91
CPSF6-206ENST00000550987 DPM2O94777 84 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 IGHV1-46P01743 117 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 OR5AC1P0C628 307 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 CCL1P22362 96 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 MESTQ5EB52 335 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 MARCH3Q86UD3 253 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 C12orf45Q8N5I9 185 aaPredicted RBP3.13□□□□□ -1.91
CPSF6-206ENST00000550987 ZIC4Q8N9L1 334 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 OR2T4Q8NH00 348 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 SLAMF6Q96DU3 332 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 GNPNAT1Q96EK6 184 aaPredicted RBP3.13□□□□□ -1.91
CPSF6-206ENST00000550987 SPANXDQ9BXN6 97 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 CST9LQ9H4G1 147 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 LINC00574Q9H8X3 128 aa3.13□□□□□ -1.91
CPSF6-206ENST00000550987 NUP214P35658 2090 aaPredicted RBP3.13□□□□□ -1.91
CPSF6-206ENST00000550987 IZUMO1RA6ND01 250 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 IFITM5A6NNB3 132 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 LYNX1G3V0Z9 82 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 APOMO95445 188 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 NCR2O95944 276 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 IGLV7-43P04211 117 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 LYNX1P0DP58 116 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 GABRA3P34903 492 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 LPAR6P43657 344 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 GABRA2P47869 451 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 ATP5G3P48201 142 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 PSMB3P49720 205 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 GNG4P50150 75 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 LYRM7Q5U5X0 104 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 FAM104BQ5XKR9 115 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 SIGLECL1Q8N7X8 197 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 OR2T27Q8NH04 317 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 PRADC1Q9BSG0 188 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 OR2J1Q9GZK6 312 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 RERGLQ9H628 205 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 PRO0461Q9UI25 63 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 AK3Q9UIJ7 227 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 ANAPC10Q9UM13 185 aa3.12□□□□□ -1.91
CPSF6-206ENST00000550987 TRAV30A0A087WSZ9 112 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 OVOL1O14753 267 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 MSMBP08118 114 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 HIST1H1BP16401 226 aaKnown RBP3.11□□□□□ -1.91
CPSF6-206ENST00000550987 AZU1P20160 251 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 GUCA1AP43080 201 aaPredicted RBP3.11□□□□□ -1.91
CPSF6-206ENST00000550987 COPZ1P61923 177 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 CDK6Q00534 326 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 ENDOGQ14249 297 aaKnown RBP3.11□□□□□ -1.91
CPSF6-206ENST00000550987 Q5VSD8 79 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 GLT8D1Q68CQ7 371 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 Q6Q795 121 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 RASL11AQ6T310 242 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 Q6ZS49 121 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 SSX8Q7RTT4 187 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 HMGN2P46Q86SG4 172 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 MMGT1Q8N4V1 131 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 C2orf50Q96LR7 162 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 TAAR3PQ9P1P4 343 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 SCP2D1Q9UJQ7 156 aa3.11□□□□□ -1.91
CPSF6-206ENST00000550987 TNXBP22105 4242 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 IGLV3-32A0A0A0MS00 114 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 IGHV3-15A0A0B4J1V0 119 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 LOC102725191A0A1B0GVB3 256 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 TRDV1A0A1B0GX56 115 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 GPX1P07203 203 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 P0DMU3 169 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 FAM231AP0DMU4 169 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 FAM231CP0DMU5 169 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 COL8A2P25067 703 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 HERVK_113P63121 156 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 HOXC5Q00444 222 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 GLYATL3Q5SZD4 288 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 MRPL2Q5T653 305 aaKnown RBP3.1□□□□□ -1.91
CPSF6-206ENST00000550987 SLC48A1Q6P1K1 146 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 ZNF767PQ75MW2 155 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 TEX29Q8N6K0 151 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 OR5H6Q8NGV6 325 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 CLDND2Q8NHS1 167 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 RMI2Q96E14 147 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 AP1S3Q96PC3 154 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 MGLLQ99685 303 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 GTSF1LQ9H1H1 148 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 MED28Q9H204 178 aa3.1□□□□□ -1.91
CPSF6-206ENST00000550987 OR5AC2Q9NZP5 309 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms