RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 ZNF138P52744 262 aa13.01□□□□□ -0.33
RBFOX1-207ENST00000547338 PMCHL1Q16048 86 aa13.01□□□□□ -0.33
RBFOX1-207ENST00000547338 TMEM78Q5T7P6 136 aa13.01□□□□□ -0.33
RBFOX1-207ENST00000547338 KIR2DL5AQ8N109 375 aa13.01□□□□□ -0.33
RBFOX1-207ENST00000547338 OR11H1Q8NG94 326 aa13.01□□□□□ -0.33
RBFOX1-207ENST00000547338 C20orf144Q9BQM9 153 aa13.01□□□□□ -0.33
RBFOX1-207ENST00000547338 OVOL1O14753 267 aa13□□□□□ -0.33
RBFOX1-207ENST00000547338 ARMS2P0C7Q2 107 aa13□□□□□ -0.33
RBFOX1-207ENST00000547338 LINC00614P0C842 121 aa13□□□□□ -0.33
RBFOX1-207ENST00000547338 LINC01559Q495D7 138 aa13□□□□□ -0.33
RBFOX1-207ENST00000547338 MRPL52Q86TS9 123 aaKnown RBP13□□□□□ -0.33
RBFOX1-207ENST00000547338 LINC00477Q96M19 166 aa13□□□□□ -0.33
RBFOX1-207ENST00000547338 NDUFAF3Q9BU61 184 aa13□□□□□ -0.33
RBFOX1-207ENST00000547338 CNFNQ9BYD5 112 aa13□□□□□ -0.33
RBFOX1-207ENST00000547338 COL7A1Q02388 2944 aa13□□□□□ -0.33
RBFOX1-207ENST00000547338 TRAV8-2A0A0B4J237 113 aa12.99□□□□□ -0.33
RBFOX1-207ENST00000547338 TRBV7-9A0A0J9YWB2 115 aa12.99□□□□□ -0.33
RBFOX1-207ENST00000547338 K7EIL1 84 aa12.99□□□□□ -0.33
RBFOX1-207ENST00000547338 IGLC6P0CF74 106 aa12.99□□□□□ -0.33
RBFOX1-207ENST00000547338 LYZL1Q6UWQ5 148 aa12.99□□□□□ -0.33
RBFOX1-207ENST00000547338 OR1N2Q8NGR9 330 aa12.99□□□□□ -0.33
RBFOX1-207ENST00000547338 PRO1933Q9H354 126 aa12.99□□□□□ -0.33
RBFOX1-207ENST00000547338 M0R2Z0 102 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 FAM106AQ4KMX7 169 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 C16orf92Q96LL3 132 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 U3KQK5 164 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 IGHV3-11P01762 117 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 LGALS1P09382 135 aaKnown RBP12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 KRTDAPP60985 99 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 RNASEKQ6P5S7 137 aaKnown RBP12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 GPHB5Q86YW7 130 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 MCRIP2Q9BUT9 160 aaKnown RBP12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 VAMP8Q9BV40 100 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 AGPAT4-IT1Q9H0P7 198 aa12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 PEF1Q9UBV8 284 aaKnown RBP12.98□□□□□ -0.33
RBFOX1-207ENST00000547338 IGHV4OR15-8A0A075B7B6 117 aa12.97□□□□□ -0.33
RBFOX1-207ENST00000547338 IGHV3OR16-8A0A075B7F1 116 aa12.97□□□□□ -0.33
RBFOX1-207ENST00000547338 A0A087WW49 117 aa12.97□□□□□ -0.33
RBFOX1-207ENST00000547338 C20orf202A1L168 122 aa12.97□□□□□ -0.33
RBFOX1-207ENST00000547338 FAM104BQ5XKR9 115 aa12.97□□□□□ -0.33
RBFOX1-207ENST00000547338 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
RBFOX1-207ENST00000547338 PPBPP02775 128 aa12.96□□□□□ -0.33
RBFOX1-207ENST00000547338 C3orf79P0CE67 100 aa12.96□□□□□ -0.33
RBFOX1-207ENST00000547338 BTF3P20290 206 aaKnown RBP12.96□□□□□ -0.33
RBFOX1-207ENST00000547338 NTF3P20783 257 aa12.96□□□□□ -0.33
RBFOX1-207ENST00000547338 HLA-DMBP28068 263 aa12.96□□□□□ -0.33
RBFOX1-207ENST00000547338 SLURP1P55000 103 aa12.96□□□□□ -0.33
RBFOX1-207ENST00000547338 C14orf144Q96I85 54 aa12.96□□□□□ -0.33
RBFOX1-207ENST00000547338 TMEM191AQ9H0A3 160 aa12.96□□□□□ -0.33
RBFOX1-207ENST00000547338 IGHV7-4-1A0A0J9YVY3 117 aa12.95□□□□□ -0.34
RBFOX1-207ENST00000547338 ORM1P02763 201 aa12.95□□□□□ -0.34
RBFOX1-207ENST00000547338 ZNF80P51504 273 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-207ENST00000547338 DLX4Q92988 240 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-207ENST00000547338 DAZ1Q9NQZ3 744 aaKnown RBP12.95□□□□□ -0.34
RBFOX1-207ENST00000547338 LAMTOR2Q9Y2Q5 125 aa12.95□□□□□ -0.34
RBFOX1-207ENST00000547338 UFC1Q9Y3C8 167 aa12.95□□□□□ -0.34
RBFOX1-207ENST00000547338 DNAH9Q9NYC9 4486 aa12.94□□□□□ -0.34
RBFOX1-207ENST00000547338 PRAC2D3DTV9 90 aa12.94□□□□□ -0.34
RBFOX1-207ENST00000547338 CRXO43186 299 aaPredicted RBP12.94□□□□□ -0.34
RBFOX1-207ENST00000547338 IGFL4Q6B9Z1 124 aa12.94□□□□□ -0.34
RBFOX1-207ENST00000547338 FAM19A2Q8N3H0 131 aa12.94□□□□□ -0.34
RBFOX1-207ENST00000547338 Q8N976 141 aa12.94□□□□□ -0.34
RBFOX1-207ENST00000547338 Q8TAT8 98 aa12.94□□□□□ -0.34
RBFOX1-207ENST00000547338 IGHV3-66A0A0C4DH42 116 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 ERCC8Q13216 396 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 ORMDL3Q8N138 153 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 OR10J6PQ8NGY7 276 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 URB1-AS1Q96HZ7 61 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 SMPXQ9UHP9 88 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 HSPB8Q9UJY1 196 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 LINC01619G3V211 115 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 SOCS3O14543 225 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 ZNF207O43670 478 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 UNQ9165/PRO28630Q6UXU0 137 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 RNF182Q8N6D2 247 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 MIEN1Q9BRT3 115 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 TMEM70Q9BUB7 260 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 TPPP3Q9BW30 176 aa12.93□□□□□ -0.34
RBFOX1-207ENST00000547338 C2orf70A6NJV1 201 aa12.92□□□□□ -0.34
RBFOX1-207ENST00000547338 LEPROTL1O95214 131 aa12.92□□□□□ -0.34
RBFOX1-207ENST00000547338 TRBV12-3P01733 135 aa12.92□□□□□ -0.34
RBFOX1-207ENST00000547338 ID1P41134 155 aa12.92□□□□□ -0.34
RBFOX1-207ENST00000547338 CACNG7P62955 275 aa12.92□□□□□ -0.34
RBFOX1-207ENST00000547338 C9orf66Q5T8R8 295 aa12.92□□□□□ -0.34
RBFOX1-207ENST00000547338 IGHV4-4A0A075B6R2 117 aa12.91□□□□□ -0.34
RBFOX1-207ENST00000547338 IGHV3OR16-13A0A075B7E8 117 aa12.91□□□□□ -0.34
RBFOX1-207ENST00000547338 IGHV3-74A0A0B4J1X5 117 aa12.91□□□□□ -0.34
RBFOX1-207ENST00000547338 TWIST1Q15672 202 aa12.91□□□□□ -0.34
RBFOX1-207ENST00000547338 ZNF738Q8NE65 137 aa12.91□□□□□ -0.34
RBFOX1-207ENST00000547338 PRSS3P2Q8NHM4 247 aa12.91□□□□□ -0.34
RBFOX1-207ENST00000547338 DPF1Q92782 380 aa12.91□□□□□ -0.34
RBFOX1-207ENST00000547338 RHPN1-AS1Q9BWJ2 59 aa12.91□□□□□ -0.34
RBFOX1-207ENST00000547338 AP5S1Q9NUS5 200 aa12.91□□□□□ -0.34
RBFOX1-207ENST00000547338 TMSB15BA0A087X1C1 80 aa12.9□□□□□ -0.34
RBFOX1-207ENST00000547338 FA2HQ7L5A8 372 aa12.9□□□□□ -0.34
RBFOX1-207ENST00000547338 SMIM15Q7Z3B0 74 aa12.9□□□□□ -0.34
RBFOX1-207ENST00000547338 ZNF575Q86XF7 245 aa12.9□□□□□ -0.34
RBFOX1-207ENST00000547338 PRELID3AQ96N28 172 aa12.9□□□□□ -0.34
RBFOX1-207ENST00000547338 IGHV3-49A0A0A0MS15 119 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms