RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 GNRH2O43555 120 aa14.79□□□□□ -0.04
SCARB1-211ENST00000546215 IFITM2Q01629 132 aa14.79□□□□□ -0.04
SCARB1-211ENST00000546215 ZNF674Q2M3X9 581 aa14.79□□□□□ -0.04
SCARB1-211ENST00000546215 PHLDA1Q8WV24 401 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-211ENST00000546215 EIF5A2Q9GZV4 153 aaKnown RBP14.79□□□□□ -0.04
SCARB1-211ENST00000546215 MDFICQ9P1T7 246 aa14.79□□□□□ -0.04
SCARB1-211ENST00000546215 RAB19A4D1S5 217 aa14.78□□□□□ -0.04
SCARB1-211ENST00000546215 TCL1AP56279 114 aa14.78□□□□□ -0.04
SCARB1-211ENST00000546215 KCNS1Q96KK3 526 aa14.78□□□□□ -0.04
SCARB1-211ENST00000546215 PLECQ15149 4684 aaKnown RBP14.78□□□□□ -0.04
SCARB1-211ENST00000546215 TRGV11A0A075B6L2 103 aa14.77□□□□□ -0.04
SCARB1-211ENST00000546215 TMEM250H0YL14 139 aa14.77□□□□□ -0.04
SCARB1-211ENST00000546215 TYMSP04818 313 aa14.77□□□□□ -0.04
SCARB1-211ENST00000546215 CENPWQ5EE01 88 aa14.77□□□□□ -0.04
SCARB1-211ENST00000546215 FAM162BQ5T6X4 162 aa14.77□□□□□ -0.04
SCARB1-211ENST00000546215 SDF2L1Q9HCN8 221 aa14.77□□□□□ -0.04
SCARB1-211ENST00000546215 TENM2Q9NT68 2774 aa14.77□□□□□ -0.05
SCARB1-211ENST00000546215 TRBV20OR9-2A0A075B6H5 130 aa14.77□□□□□ -0.05
SCARB1-211ENST00000546215 IGKV3D-20A0A0C4DH25 116 aa14.77□□□□□ -0.05
SCARB1-211ENST00000546215 SH2D1AO60880 128 aa14.77□□□□□ -0.05
SCARB1-211ENST00000546215 NDUFS6O75380 124 aaKnown RBP14.77□□□□□ -0.05
SCARB1-211ENST00000546215 IGLV2-8P01709 118 aa14.77□□□□□ -0.05
SCARB1-211ENST00000546215 DAD1P61803 113 aa14.77□□□□□ -0.05
SCARB1-211ENST00000546215 IGHV3-16A0A0C4DH30 117 aa14.76□□□□□ -0.05
SCARB1-211ENST00000546215 DEFB130BP0DP73 79 aa14.76□□□□□ -0.05
SCARB1-211ENST00000546215 DEFB130AP0DP74 79 aa14.76□□□□□ -0.05
SCARB1-211ENST00000546215 ZNF415Q09FC8 603 aa14.76□□□□□ -0.05
SCARB1-211ENST00000546215 LINC00612Q8N6U2 182 aa14.76□□□□□ -0.05
SCARB1-211ENST00000546215 GNG4P50150 75 aa14.75□□□□□ -0.05
SCARB1-211ENST00000546215 CEMP1Q6PRD7 247 aaPredicted RBP14.75□□□□□ -0.05
SCARB1-211ENST00000546215 SPINK4O60575 86 aa14.74□□□□□ -0.05
SCARB1-211ENST00000546215 PARLQ9H300 379 aa14.74□□□□□ -0.05
SCARB1-211ENST00000546215 TRAV10A0A0B4J240 114 aa14.73□□□□□ -0.05
SCARB1-211ENST00000546215 NUPR2A6NF83 97 aa14.73□□□□□ -0.05
SCARB1-211ENST00000546215 ORM1P02763 201 aa14.73□□□□□ -0.05
SCARB1-211ENST00000546215 RAB14P61106 215 aa14.73□□□□□ -0.05
SCARB1-211ENST00000546215 Q6ZTI0 123 aa14.73□□□□□ -0.05
SCARB1-211ENST00000546215 SMIM12Q96EX1 92 aa14.73□□□□□ -0.05
SCARB1-211ENST00000546215 SRP19P09132 144 aaKnown RBP14.73□□□□□ -0.05
SCARB1-211ENST00000546215 ZNF575Q86XF7 245 aa14.73□□□□□ -0.05
SCARB1-211ENST00000546215 DEFB131BA0A096LNP1 70 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 GAGE12BA1L429 117 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 PGPEP1LA6NFU8 196 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 B4DEV8 164 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 KRBOX1C9JBD0 128 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 GAGE7O76087 117 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 GAGE12FP0CL80 117 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 GAGE12GP0CL81 117 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 GAGE12IP0CL82 117 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 SRSF3P84103 164 aaKnown RBP14.72□□□□□ -0.05
SCARB1-211ENST00000546215 LGALS9BQ3B8N2 356 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 LINC01559Q495D7 138 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 PRR27Q6MZM9 219 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 SPXQ9BT56 116 aa14.72□□□□□ -0.05
SCARB1-211ENST00000546215 TRGV1A0A0A0MS02 117 aa14.71□□□□□ -0.05
SCARB1-211ENST00000546215 C9JCJ5 164 aa14.71□□□□□ -0.05
SCARB1-211ENST00000546215 M0R036 132 aa14.71□□□□□ -0.05
SCARB1-211ENST00000546215 CLLU1Q5K131 121 aa14.71□□□□□ -0.05
SCARB1-211ENST00000546215 C9JQL5 133 aa14.7□□□□□ -0.06
SCARB1-211ENST00000546215 MGST1P10620 155 aaKnown RBP14.7□□□□□ -0.06
SCARB1-211ENST00000546215 RNASE3P12724 160 aaKnown RBP14.7□□□□□ -0.06
SCARB1-211ENST00000546215 CEBPGP53567 150 aa14.7□□□□□ -0.06
SCARB1-211ENST00000546215 MRPL16Q9NX20 251 aaKnown RBP14.69□□□□□ -0.06
SCARB1-211ENST00000546215 PEA15Q15121 130 aa14.68□□□□□ -0.06
SCARB1-211ENST00000546215 DNLZQ5SXM8 178 aa14.68□□□□□ -0.06
SCARB1-211ENST00000546215 OCC1Q8TAD7 63 aa14.68□□□□□ -0.06
SCARB1-211ENST00000546215 RASL10AQ92737 203 aa14.68□□□□□ -0.06
SCARB1-211ENST00000546215 C9orf85Q96MD7 179 aa14.68□□□□□ -0.06
SCARB1-211ENST00000546215 C18orf15Q96N68 181 aa14.68□□□□□ -0.06
SCARB1-211ENST00000546215 SMDT1Q9H4I9 107 aa14.68□□□□□ -0.06
SCARB1-211ENST00000546215 KLK5Q9Y337 293 aaPredicted RBP14.68□□□□□ -0.06
SCARB1-211ENST00000546215 MUC4Q99102 2169 aa14.68□□□□□ -0.06
SCARB1-211ENST00000546215 HTN3P15516 51 aa14.68□□□□□ -0.06
SCARB1-211ENST00000546215 LYSTQ99698 3801 aa14.67□□□□□ -0.06
SCARB1-211ENST00000546215 TMSB15BA0A087X1C1 80 aa14.67□□□□□ -0.06
SCARB1-211ENST00000546215 C19orf71A6NCJ1 209 aa14.67□□□□□ -0.06
SCARB1-211ENST00000546215 M0R2P5 195 aa14.67□□□□□ -0.06
SCARB1-211ENST00000546215 ATP5G1P05496 136 aa14.67□□□□□ -0.06
SCARB1-211ENST00000546215 ASIPP42127 132 aa14.67□□□□□ -0.06
SCARB1-211ENST00000546215 SMIM7Q9BQ49 75 aa14.67□□□□□ -0.06
SCARB1-211ENST00000546215 TRGV2A0A075B6R0 118 aa14.66□□□□□ -0.06
SCARB1-211ENST00000546215 GRIFINA4D1Z8 144 aa14.66□□□□□ -0.06
SCARB1-211ENST00000546215 K7EN84 100 aa14.66□□□□□ -0.06
SCARB1-211ENST00000546215 S100A4P26447 101 aaKnown RBP14.66□□□□□ -0.06
SCARB1-211ENST00000546215 RPL19P84098 196 aaKnown RBP14.66□□□□□ -0.06
SCARB1-211ENST00000546215 OR5I1Q13606 314 aa14.66□□□□□ -0.06
SCARB1-211ENST00000546215 BIN3Q9NQY0 253 aa14.66□□□□□ -0.06
SCARB1-211ENST00000546215 IGLL5B9A064 214 aa14.65□□□□□ -0.06
SCARB1-211ENST00000546215 IL36BQ9NZH7 164 aa14.65□□□□□ -0.06
SCARB1-211ENST00000546215 ZNF727A8MUV8 499 aa14.64□□□□□ -0.07
SCARB1-211ENST00000546215 DAZAP1Q96EP5 407 aaKnown RBP14.64□□□□□ -0.07
SCARB1-211ENST00000546215 F5H768 121 aa14.64□□□□□ -0.07
SCARB1-211ENST00000546215 LY96Q9Y6Y9 160 aa14.64□□□□□ -0.07
SCARB1-211ENST00000546215 KMT2CQ8NEZ4 4911 aaKnown RBP14.63□□□□□ -0.07
SCARB1-211ENST00000546215 H3BVH4 76 aa14.63□□□□□ -0.07
SCARB1-211ENST00000546215 CXCL1P09341 107 aa14.63□□□□□ -0.07
SCARB1-211ENST00000546215 ARMS2P0C7Q2 107 aa14.63□□□□□ -0.07
SCARB1-211ENST00000546215 PTH2Q96A98 100 aa14.63□□□□□ -0.07
SCARB1-211ENST00000546215 IGHV4-4A0A075B6R2 117 aa14.62□□□□□ -0.07
SCARB1-211ENST00000546215 HOXA5P20719 270 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms