RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 OVOL1O14753 267 aa10.56□□□□□ -0.72
MSH2-206ENST00000543555 PRR9Q5T870 116 aa10.56□□□□□ -0.72
MSH2-206ENST00000543555 Q6ZQT7 251 aa10.56□□□□□ -0.72
MSH2-206ENST00000543555 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
MSH2-206ENST00000543555 ST20Q9HBF5 79 aa10.56□□□□□ -0.72
MSH2-206ENST00000543555 TCAPO15273 167 aa10.56□□□□□ -0.72
MSH2-206ENST00000543555 RHPN1-AS1Q9BWJ2 59 aa10.56□□□□□ -0.72
MSH2-206ENST00000543555 NF1P21359 2839 aa10.56□□□□□ -0.72
MSH2-206ENST00000543555 TCF21O43680 179 aa10.55□□□□□ -0.72
MSH2-206ENST00000543555 RPL11P62913 178 aaKnown RBP10.55□□□□□ -0.72
MSH2-206ENST00000543555 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
MSH2-206ENST00000543555 OR10J6PQ8NGY7 276 aa10.55□□□□□ -0.72
MSH2-206ENST00000543555 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
MSH2-206ENST00000543555 LAMTOR2Q9Y2Q5 125 aa10.55□□□□□ -0.72
MSH2-206ENST00000543555 MRPS16Q9Y3D3 137 aaKnown RBP10.55□□□□□ -0.72
MSH2-206ENST00000543555 TGFAP01135 160 aa10.55□□□□□ -0.72
MSH2-206ENST00000543555 PEF1Q9UBV8 284 aaKnown RBP10.55□□□□□ -0.72
MSH2-206ENST00000543555 PSMB8P28062 276 aa10.55□□□□□ -0.72
MSH2-206ENST00000543555 MAP1LC3AQ9H492 121 aa10.55□□□□□ -0.72
MSH2-206ENST00000543555 GAS8-AS1O95177 125 aa10.54□□□□□ -0.72
MSH2-206ENST00000543555 HBDP02042 147 aa10.54□□□□□ -0.72
MSH2-206ENST00000543555 ZFAND2AQ8N6M9 145 aa10.54□□□□□ -0.72
MSH2-206ENST00000543555 PMCHL2Q9BQD1 86 aa10.54□□□□□ -0.72
MSH2-206ENST00000543555 HSBP1L1C9JCN9 74 aa10.54□□□□□ -0.72
MSH2-206ENST00000543555 SMPXQ9UHP9 88 aa10.54□□□□□ -0.72
MSH2-206ENST00000543555 SETD2Q9BYW2 2564 aaPredicted RBP10.54□□□□□ -0.72
MSH2-206ENST00000543555 SNAI2O43623 268 aa10.53□□□□□ -0.72
MSH2-206ENST00000543555 DEFB1P60022 68 aa10.53□□□□□ -0.72
MSH2-206ENST00000543555 IGKV3-7A0A075B6H7 116 aa10.53□□□□□ -0.72
MSH2-206ENST00000543555 K7EMT4 169 aa10.53□□□□□ -0.72
MSH2-206ENST00000543555 COL5A1-AS1Q5SY13 56 aa10.53□□□□□ -0.72
MSH2-206ENST00000543555 KRTAP1-3Q8IUG1 177 aa10.53□□□□□ -0.72
MSH2-206ENST00000543555 OR8A1Q8NGG7 326 aa10.53□□□□□ -0.72
MSH2-206ENST00000543555 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.72
MSH2-206ENST00000543555 TNFRSF6BO95407 300 aa10.52□□□□□ -0.72
MSH2-206ENST00000543555 EVI2AP22794 236 aa10.52□□□□□ -0.72
MSH2-206ENST00000543555 FXYD7P58549 80 aa10.52□□□□□ -0.72
MSH2-206ENST00000543555 J3KRW8 73 aa10.52□□□□□ -0.73
MSH2-206ENST00000543555 TEP1Q99973 2627 aaKnown RBP10.52□□□□□ -0.73
MSH2-206ENST00000543555 TRAV21A0A0B4J279 112 aa10.52□□□□□ -0.73
MSH2-206ENST00000543555 LINC01546A6NGU7 62 aa10.52□□□□□ -0.73
MSH2-206ENST00000543555 EDN2P20800 178 aa10.52□□□□□ -0.73
MSH2-206ENST00000543555 CACNG7P62955 275 aa10.52□□□□□ -0.73
MSH2-206ENST00000543555 SMIM15Q7Z3B0 74 aa10.52□□□□□ -0.73
MSH2-206ENST00000543555 FAM19A4Q96LR4 140 aa10.52□□□□□ -0.73
MSH2-206ENST00000543555 H3BVH4 76 aa10.51□□□□□ -0.73
MSH2-206ENST00000543555 C10orf99Q6UWK7 81 aa10.51□□□□□ -0.73
MSH2-206ENST00000543555 MS4A6AQ9H2W1 248 aa10.51□□□□□ -0.73
MSH2-206ENST00000543555 TMEM89A2RUT3 159 aa10.51□□□□□ -0.73
MSH2-206ENST00000543555 F6UB75 175 aa10.51□□□□□ -0.73
MSH2-206ENST00000543555 GATA1P15976 413 aaPredicted RBP10.51□□□□□ -0.73
MSH2-206ENST00000543555 SPANXN1Q5VSR9 72 aa10.51□□□□□ -0.73
MSH2-206ENST00000543555 STPG4Q8N801 248 aa10.51□□□□□ -0.73
MSH2-206ENST00000543555 SELENOKQ9Y6D0 94 aa10.51□□□□□ -0.73
MSH2-206ENST00000543555 HIVEP1P15822 2718 aa10.51□□□□□ -0.73
MSH2-206ENST00000543555 NXT2Q9NPJ8 142 aaKnown RBP10.5□□□□□ -0.73
MSH2-206ENST00000543555 SCRT2Q9NQ03 307 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 TP73-AS1Q9UF72 201 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 FSHBP01225 129 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 TFPI2P48307 235 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 UFC1Q9Y3C8 167 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 CR1P17927 2039 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 IGHV4-31P0DP07 118 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 SRD5A1P18405 259 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 HINT1P49773 126 aaPredicted RBP10.5□□□□□ -0.73
MSH2-206ENST00000543555 LGALS9BQ3B8N2 356 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 LGALS9CQ6DKI2 356 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 APRG1Q8IVJ8 170 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 SMR3AQ99954 134 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 VPREB3Q9UKI3 123 aa10.5□□□□□ -0.73
MSH2-206ENST00000543555 TRBV7-9A0A0J9YWB2 115 aa10.49□□□□□ -0.73
MSH2-206ENST00000543555 ZNF25P17030 456 aaPredicted RBP10.49□□□□□ -0.73
MSH2-206ENST00000543555 G0S2P27469 103 aa10.49□□□□□ -0.73
MSH2-206ENST00000543555 SLC25A34Q6PIV7 304 aa10.49□□□□□ -0.73
MSH2-206ENST00000543555 IFI27L1Q96BM0 104 aa10.49□□□□□ -0.73
MSH2-206ENST00000543555 GOLT1BQ9Y3E0 138 aa10.49□□□□□ -0.73
MSH2-206ENST00000543555 OR2K2Q8NGT1 345 aa10.49□□□□□ -0.73
MSH2-206ENST00000543555 BEX4Q9NWD9 120 aaPredicted RBP10.49□□□□□ -0.73
MSH2-206ENST00000543555 NIPBLQ6KC79 2804 aaeCLIP10.48□□□□□ -0.73
MSH2-206ENST00000543555 ANXA2RQ3ZCQ2 193 aa10.48□□□□□ -0.73
MSH2-206ENST00000543555 Q6YL49 198 aa10.48□□□□□ -0.73
MSH2-206ENST00000543555 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
MSH2-206ENST00000543555 FCER1GP30273 86 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 RNASE4P34096 147 aaKnown RBP10.47□□□□□ -0.73
MSH2-206ENST00000543555 LEPP41159 167 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 SAMD13Q5VXD3 122 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 Q8N8P6 123 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 NRACQ8N912 160 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 IGLV2-18A0A075B6J9 118 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 ID1P41134 155 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 ASIPP42127 132 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 KIR3DS1Q14943 382 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 TRAV26-2A0A0B4J265 109 aa10.47□□□□□ -0.73
MSH2-206ENST00000543555 S100A4P26447 101 aaKnown RBP10.47□□□□□ -0.73
MSH2-206ENST00000543555 PRSS47A8MTI9 375 aa10.46□□□□□ -0.73
MSH2-206ENST00000543555 DEFB125Q8N687 156 aa10.46□□□□□ -0.73
MSH2-206ENST00000543555 TMEM208Q9BTX3 173 aa10.46□□□□□ -0.73
MSH2-206ENST00000543555 WFDC3Q8IUB2 231 aa10.46□□□□□ -0.74
MSH2-206ENST00000543555 DPF1Q92782 380 aa10.46□□□□□ -0.74
MSH2-206ENST00000543555 M0R381 172 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms