RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 SLC25A48Q6ZT89 311 aaKnown RBP8.85□□□□□ -0.99
CDH4-201ENST00000543233 C1orf43Q9BWL3 253 aa8.85□□□□□ -0.99
CDH4-201ENST00000543233 PRSS22Q9GZN4 317 aa8.85□□□□□ -0.99
CDH4-201ENST00000543233 IGHV3-21A0A0B4J1V1 117 aa8.84□□□□□ -0.99
CDH4-201ENST00000543233 SAA1P0DJI8 122 aaPredicted RBP8.84□□□□□ -0.99
CDH4-201ENST00000543233 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
CDH4-201ENST00000543233 IGFBPL1Q8WX77 278 aa8.84□□□□□ -0.99
CDH4-201ENST00000543233 FAM167A-AS1Q96KT0 104 aa8.84□□□□□ -0.99
CDH4-201ENST00000543233 RPUSD1Q9UJJ7 312 aaKnown RBP8.84□□□□□ -0.99
CDH4-201ENST00000543233 GATA4P43694 442 aa8.84□□□□□ -0.99
CDH4-201ENST00000543233 Q8N1Y9 231 aa8.84□□□□□ -0.99
CDH4-201ENST00000543233 TRGV9Q99603 122 aa8.84□□□□□ -0.99
CDH4-201ENST00000543233 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
CDH4-201ENST00000543233 PKD1L2Q7Z442 2459 aa8.83□□□□□ -1
CDH4-201ENST00000543233 HIVEP3Q5T1R4 2406 aa8.83□□□□□ -1
CDH4-201ENST00000543233 RBAKDNA6NC62 111 aa8.83□□□□□ -1
CDH4-201ENST00000543233 C19orf71A6NCJ1 209 aa8.83□□□□□ -1
CDH4-201ENST00000543233 TMEM200BQ69YZ2 307 aa8.83□□□□□ -1
CDH4-201ENST00000543233 ZNF493Q6ZR52 646 aa8.83□□□□□ -1
CDH4-201ENST00000543233 Q71RC1 249 aaPredicted RBP8.83□□□□□ -1
CDH4-201ENST00000543233 TRPT1Q86TN4 253 aaKnown RBP8.83□□□□□ -1
CDH4-201ENST00000543233 ZNF714Q96N38 554 aa8.83□□□□□ -1
CDH4-201ENST00000543233 ODF3Q96PU9 254 aa8.83□□□□□ -1
CDH4-201ENST00000543233 TEX49A0A1B0GTD5 131 aa8.83□□□□□ -1
CDH4-201ENST00000543233 E7EUB6 86 aa8.83□□□□□ -1
CDH4-201ENST00000543233 ORM2P19652 201 aa8.83□□□□□ -1
CDH4-201ENST00000543233 C4orf26Q17RF5 130 aa8.83□□□□□ -1
CDH4-201ENST00000543233 PSMG4Q5JS54 123 aa8.83□□□□□ -1
CDH4-201ENST00000543233 TRGV11A0A075B6L2 103 aa8.82□□□□□ -1
CDH4-201ENST00000543233 NDUFB3O43676 98 aa8.82□□□□□ -1
CDH4-201ENST00000543233 CRIP2P52943 208 aaPredicted RBP8.82□□□□□ -1
CDH4-201ENST00000543233 GAGE2AQ6NT46 116 aa8.82□□□□□ -1
CDH4-201ENST00000543233 E7EQL1 145 aa8.82□□□□□ -1
CDH4-201ENST00000543233 CTSZQ9UBR2 303 aa8.82□□□□□ -1
CDH4-201ENST00000543233 ZNF256Q9Y2P7 627 aaPredicted RBP8.82□□□□□ -1
CDH4-201ENST00000543233 GOLT1AQ6ZVE7 132 aa8.81□□□□□ -1
CDH4-201ENST00000543233 KIR2DL5BQ8NHK3 375 aa8.81□□□□□ -1
CDH4-201ENST00000543233 RNASE6Q93091 150 aaKnown RBP8.81□□□□□ -1
CDH4-201ENST00000543233 FMC1Q96HJ9 113 aa8.81□□□□□ -1
CDH4-201ENST00000543233 TMEM178BH3BS89 294 aa8.81□□□□□ -1
CDH4-201ENST00000543233 IGHV4-39P01824 125 aa8.81□□□□□ -1
CDH4-201ENST00000543233 COX7A1P24310 79 aa8.81□□□□□ -1
CDH4-201ENST00000543233 Q1RN00 199 aa8.81□□□□□ -1
CDH4-201ENST00000543233 MRPL51Q4U2R6 128 aaKnown RBP8.81□□□□□ -1
CDH4-201ENST00000543233 C3orf22Q8N5N4 141 aa8.81□□□□□ -1
CDH4-201ENST00000543233 RITA1Q96K30 269 aa8.81□□□□□ -1
CDH4-201ENST00000543233 MLST8Q9BVC4 326 aa8.81□□□□□ -1
CDH4-201ENST00000543233 TPSG1Q9NRR2 321 aa8.81□□□□□ -1
CDH4-201ENST00000543233 TMEM14BQ9NUH8 114 aa8.81□□□□□ -1
CDH4-201ENST00000543233 BEX4Q9NWD9 120 aaPredicted RBP8.81□□□□□ -1
CDH4-201ENST00000543233 PKIGQ9Y2B9 76 aa8.81□□□□□ -1
CDH4-201ENST00000543233 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.8□□□□□ -1
CDH4-201ENST00000543233 ATP5LO75964 103 aa8.8□□□□□ -1
CDH4-201ENST00000543233 HCP5Q6MZN7 132 aa8.8□□□□□ -1
CDH4-201ENST00000543233 LINC00305Q7Z4B0 112 aa8.8□□□□□ -1
CDH4-201ENST00000543233 PRNDQ9UKY0 176 aa8.8□□□□□ -1
CDH4-201ENST00000543233 MSRB2Q9Y3D2 182 aa8.8□□□□□ -1
CDH4-201ENST00000543233 UPK2O00526 184 aa8.8□□□□□ -1
CDH4-201ENST00000543233 UBE2D3P61077 147 aa8.8□□□□□ -1
CDH4-201ENST00000543233 UBE2D2P62837 147 aa8.8□□□□□ -1
CDH4-201ENST00000543233 PIFOQ8TCI5 191 aa8.8□□□□□ -1
CDH4-201ENST00000543233 FXYD5Q96DB9 178 aa8.8□□□□□ -1
CDH4-201ENST00000543233 VKORC1Q9BQB6 163 aa8.8□□□□□ -1
CDH4-201ENST00000543233 ZNF815PA8K554 130 aa8.8□□□□□ -1
CDH4-201ENST00000543233 NUP37Q8NFH4 326 aa8.8□□□□□ -1
CDH4-201ENST00000543233 LINC00477Q96M19 166 aa8.8□□□□□ -1
CDH4-201ENST00000543233 FOXA2Q9Y261 457 aaPredicted RBP8.8□□□□□ -1
CDH4-201ENST00000543233 CD3EP07766 207 aa8.79□□□□□ -1
CDH4-201ENST00000543233 SHISA9B4DS77 424 aa8.79□□□□□ -1
CDH4-201ENST00000543233 TCRAP04437 139 aa8.79□□□□□ -1
CDH4-201ENST00000543233 FAM104BQ5XKR9 115 aa8.79□□□□□ -1
CDH4-201ENST00000543233 CEMP1Q6PRD7 247 aaPredicted RBP8.79□□□□□ -1
CDH4-201ENST00000543233 TMEM219Q86XT9 240 aa8.79□□□□□ -1
CDH4-201ENST00000543233 HERVK_113P61574 105 aa8.78□□□□□ -1
CDH4-201ENST00000543233 TEX36Q5VZQ5 186 aa8.78□□□□□ -1
CDH4-201ENST00000543233 LYZL1Q6UWQ5 148 aa8.78□□□□□ -1
CDH4-201ENST00000543233 Q86TA4 180 aa8.78□□□□□ -1
CDH4-201ENST00000543233 BAALCQ8WXS3 180 aa8.78□□□□□ -1
CDH4-201ENST00000543233 Q9H3A6 140 aa8.78□□□□□ -1
CDH4-201ENST00000543233 LINC00527Q9UJ94 153 aa8.78□□□□□ -1
CDH4-201ENST00000543233 H3BMM0 161 aa8.78□□□□□ -1
CDH4-201ENST00000543233 J3QLI3 93 aa8.78□□□□□ -1
CDH4-201ENST00000543233 TIMM23O14925 209 aa8.78□□□□□ -1
CDH4-201ENST00000543233 CNTFRP26992 372 aa8.78□□□□□ -1
CDH4-201ENST00000543233 PRCDQ00LT1 54 aa8.78□□□□□ -1
CDH4-201ENST00000543233 MYOZ3Q8TDC0 251 aa8.78□□□□□ -1
CDH4-201ENST00000543233 UBE2WQ96B02 151 aa8.78□□□□□ -1
CDH4-201ENST00000543233 UCNP55089 124 aa8.78□□□□□ -1
CDH4-201ENST00000543233 MRPS12O15235 138 aaKnown RBP8.77□□□□□ -1.01
CDH4-201ENST00000543233 LGALS1P09382 135 aaKnown RBP8.77□□□□□ -1.01
CDH4-201ENST00000543233 EDN2P20800 178 aa8.77□□□□□ -1.01
CDH4-201ENST00000543233 LOXP28300 417 aaPredicted RBP8.77□□□□□ -1.01
CDH4-201ENST00000543233 CDSNQ15517 529 aa8.77□□□□□ -1.01
CDH4-201ENST00000543233 MRAPQ8TCY5 172 aa8.77□□□□□ -1.01
CDH4-201ENST00000543233 ZMAT4Q9H898 229 aa8.77□□□□□ -1.01
CDH4-201ENST00000543233 ITPR1Q14643 2758 aa8.77□□□□□ -1.01
CDH4-201ENST00000543233 HRNRQ86YZ3 2850 aaPredicted RBP8.77□□□□□ -1.01
CDH4-201ENST00000543233 CCL21O00585 134 aa8.77□□□□□ -1.01
CDH4-201ENST00000543233 UQCRQO14949 82 aa8.77□□□□□ -1.01
CDH4-201ENST00000543233 DUX3Q96PT4 197 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms