RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ZNF137PP52743 207 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 KLKP1Q107X0 134 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 PLGLAQ15195 96 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 RBMY1FQ15415 496 aaKnown RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 ORMDL2Q53FV1 153 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 C10orf128Q5T292 105 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 COX8CQ7Z4L0 72 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 LYPD1Q8N2G4 141 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 WFDC5Q8TCV5 224 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 DCANP1Q8TF63 244 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 TMEM263Q8WUH6 116 aaKnown RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 LYZL4Q96KX0 146 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 OVOL2Q9BRP0 275 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 KLK15Q9H2R5 256 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 MRPL35Q9NZE8 188 aaKnown RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 Q9UF83 564 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 LSM7Q9UK45 103 aaKnown RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 TIMM8BQ9Y5J9 83 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 PCDH15Q96QU1 1955 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 REV3LO60673 3130 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 ARID1BQ8NFD5 2236 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-219ENST00000542112 TNRC18O15417 2968 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-219ENST00000542112 NCOR1O75376 2440 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 SDHAF1A6NFY7 115 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 C4orf51C9J302 202 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 WNT9BO14905 357 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 PROP1O75360 226 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 IGF1P05019 195 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 ZNF883P0CG24 379 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 DAZ2Q13117 558 aaKnown RBP3.29□□□□□ -1.88
SNHG1-219ENST00000542112 LAGE3Q14657 143 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 PIGYQ3MUY2 71 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 IGFL2Q6UWQ7 119 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 C9orf139Q6ZV77 190 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 Q8IYB0 196 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 TMEM75Q8N9X5 138 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 NUP37Q8NFH4 326 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 ITLN1Q8WWA0 313 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 ZNF799Q96GE5 643 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 FAM167A-AS1Q96KT0 104 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 TIMM21Q9BVV7 248 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 CNFNQ9BYD5 112 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 HES7Q9BYE0 225 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 PRO3102Q9H379 93 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 PTPRBP23467 1997 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 KIAA1549Q9HCM3 1950 aa3.29□□□□□ -1.88
SNHG1-219ENST00000542112 CACNA1IQ9P0X4 2223 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 ABCA7Q8IZY2 2146 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 PHF3Q92576 2039 aaKnown RBP3.28□□□□□ -1.88
SNHG1-219ENST00000542112 PCNX3Q9H6A9 2034 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 TRAV41A0A0B4J266 112 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 IGHV1-69DA0A0B4J2H0 117 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 IGKV1-12A0A0C4DH73 117 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 TMEM223A0PJW6 202 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 LINC01548A6NM66 108 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 IBA57-AS1B1ANH7 110 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 OVOL3O00110 214 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 NXPH4O95158 308 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 PPP1R17O96001 155 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 IGKV1D-12P01611 117 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 Q1RN00 199 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 MRPL51Q4U2R6 128 aaKnown RBP3.28□□□□□ -1.88
SNHG1-219ENST00000542112 C2orf83Q53S99 150 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 GUSBP11Q6P575 273 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 ZNF826PQ6ZT77 177 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 FP248Q71RG6 208 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-219ENST00000542112 VN1R4Q7Z5H5 301 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 DAZ4Q86SG3 579 aaKnown RBP3.28□□□□□ -1.88
SNHG1-219ENST00000542112 Q86TA4 180 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 Q8N1X5 172 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 WFDC11Q8NEX6 87 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 COX14Q96I36 57 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 SLC50A1Q9BRV3 221 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 KRTAP9-2Q9BYQ4 174 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 DEFB127Q9H1M4 99 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 DAZ3Q9NR90 486 aaKnown RBP3.28□□□□□ -1.88
SNHG1-219ENST00000542112 TMEM14CQ9P0S9 112 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 CCL26Q9Y258 94 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 CABIN1Q9Y6J0 2220 aa3.28□□□□□ -1.88
SNHG1-219ENST00000542112 TNRC6BQ9UPQ9 1833 aaKnown RBP3.28□□□□□ -1.88
SNHG1-219ENST00000542112 LAMA2P24043 3122 aaKnown RBP3.28□□□□□ -1.88
SNHG1-219ENST00000542112 SPTBP11277 2137 aa3.28□□□□□ -1.89
SNHG1-219ENST00000542112 SEC16AO15027 2179 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 IGKV1-27A0A075B6S5 117 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 TRAV7A0A075B6U4 112 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 TRAV13-2A0A0B4J235 113 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 TRBV27A0A0K0K1C4 114 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 C11orf86A6NJI1 115 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 CCKP06307 115 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 ARMS2P0C7Q2 107 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 DEFA4P12838 97 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 ZNF22P17026 224 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-219ENST00000542112 CD70P32970 193 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 SAA4P35542 130 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 MAGEA5P43359 124 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 XCL1P47992 114 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 CRIP2P52943 208 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-219ENST00000542112 KRTAP10-2P60368 255 aa3.27□□□□□ -1.89
SNHG1-219ENST00000542112 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-219ENST00000542112 C10orf113Q5VZT2 155 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms