RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 NEGR1Q7Z3B1 354 aa10.44□□□□□ -0.74
BNIP3-202ENST00000540159 C2CD3Q4AC94 2353 aa10.43□□□□□ -0.74
BNIP3-202ENST00000540159 S100A4P26447 101 aaKnown RBP10.43□□□□□ -0.74
BNIP3-202ENST00000540159 MGPP08493 103 aa10.43□□□□□ -0.74
BNIP3-202ENST00000540159 GCSHP23434 173 aa10.43□□□□□ -0.74
BNIP3-202ENST00000540159 RPS20P60866 119 aaKnown RBP10.43□□□□□ -0.74
BNIP3-202ENST00000540159 GATD1Q8NB37 220 aa10.43□□□□□ -0.74
BNIP3-202ENST00000540159 K7ERJ3 54 aa10.42□□□□□ -0.74
BNIP3-202ENST00000540159 C14orf178Q8N769 122 aaPredicted RBP10.42□□□□□ -0.74
BNIP3-202ENST00000540159 A1L4Q6 167 aa10.42□□□□□ -0.74
BNIP3-202ENST00000540159 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
BNIP3-202ENST00000540159 C10orf99Q6UWK7 81 aa10.42□□□□□ -0.74
BNIP3-202ENST00000540159 LGALS9BQ3B8N2 356 aa10.42□□□□□ -0.74
BNIP3-202ENST00000540159 LGALS9CQ6DKI2 356 aa10.42□□□□□ -0.74
BNIP3-202ENST00000540159 OR2K2Q8NGT1 345 aa10.42□□□□□ -0.74
BNIP3-202ENST00000540159 NACAE9PAV3 2078 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 IGHV7-4-1A0A0J9YVY3 117 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 GNRH2O43555 120 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 LINC01559Q495D7 138 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 ZC2HC1BQ5TFG8 222 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 PIFOQ8TCI5 191 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 RPL39LQ96EH5 51 aaKnown RBP10.41□□□□□ -0.74
BNIP3-202ENST00000540159 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 JMJD8Q96S16 334 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 SLC50A1Q9BRV3 221 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 TMEM8BA6NDV4 472 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 HIST2H2BDQ6DRA6 164 aa10.41□□□□□ -0.74
BNIP3-202ENST00000540159 S100A7P31151 101 aa10.4□□□□□ -0.74
BNIP3-202ENST00000540159 MRPL35Q9NZE8 188 aaKnown RBP10.4□□□□□ -0.74
BNIP3-202ENST00000540159 MOB4Q9Y3A3 225 aa10.4□□□□□ -0.74
BNIP3-202ENST00000540159 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.74
BNIP3-202ENST00000540159 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
BNIP3-202ENST00000540159 FCER1GP30273 86 aa10.4□□□□□ -0.74
BNIP3-202ENST00000540159 SMIM15Q7Z3B0 74 aa10.4□□□□□ -0.74
BNIP3-202ENST00000540159 ATP5J2P56134 94 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 ODF1Q14990 250 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 TRBV7-1A0A0A6YYK4 115 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 CD5LO43866 347 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 EMP1P54849 157 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 RBX1P62877 108 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 IGHV1-69DA0A0B4J2H0 117 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 IGHV1-69P01742 117 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 GPHB5Q86YW7 130 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 BOD1L2Q8IYS8 172 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 JPT2Q9H910 190 aa10.39□□□□□ -0.75
BNIP3-202ENST00000540159 JMJD1CQ15652 2540 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 GAGE10A6NGK3 116 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 SAP30O75446 220 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 CBY1Q9Y3M2 126 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 MUC4Q99102 2169 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 AVPP01185 164 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 ANXA2RQ3ZCQ2 193 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 DUX5Q96PT3 197 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 CCL19Q99731 98 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 VPS25Q9BRG1 176 aa10.38□□□□□ -0.75
BNIP3-202ENST00000540159 FXYD2P54710 66 aa10.37□□□□□ -0.75
BNIP3-202ENST00000540159 OR4X2Q8NGF9 303 aa10.37□□□□□ -0.75
BNIP3-202ENST00000540159 PSMG3-AS1Q96PY0 264 aa10.37□□□□□ -0.75
BNIP3-202ENST00000540159 CST9LQ9H4G1 147 aa10.37□□□□□ -0.75
BNIP3-202ENST00000540159 CHD6Q8TD26 2715 aa10.37□□□□□ -0.75
BNIP3-202ENST00000540159 IGKCP01834 107 aa10.37□□□□□ -0.75
BNIP3-202ENST00000540159 SFTPCP11686 197 aa10.37□□□□□ -0.75
BNIP3-202ENST00000540159 COX8CQ7Z4L0 72 aa10.37□□□□□ -0.75
BNIP3-202ENST00000540159 PEF1Q9UBV8 284 aaKnown RBP10.37□□□□□ -0.75
BNIP3-202ENST00000540159 PHLDA3Q9Y5J5 127 aa10.37□□□□□ -0.75
BNIP3-202ENST00000540159 NXT2Q9NPJ8 142 aaKnown RBP10.37□□□□□ -0.75
BNIP3-202ENST00000540159 RAB9AP51151 201 aa10.36□□□□□ -0.75
BNIP3-202ENST00000540159 NRACQ8N912 160 aa10.36□□□□□ -0.75
BNIP3-202ENST00000540159 OR10J6PQ8NGY7 276 aa10.36□□□□□ -0.75
BNIP3-202ENST00000540159 HHLA3Q9XRX5 114 aa10.36□□□□□ -0.75
BNIP3-202ENST00000540159 ZNF469Q96JG9 3925 aaPredicted RBP10.36□□□□□ -0.75
BNIP3-202ENST00000540159 PPBPP02775 128 aa10.36□□□□□ -0.75
BNIP3-202ENST00000540159 RHPN1-AS1Q9BWJ2 59 aa10.36□□□□□ -0.75
BNIP3-202ENST00000540159 ADAMTSL5Q6ZMM2 481 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 MTURNQ8N3F0 131 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 MYOZ3Q8TDC0 251 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 MTORP42345 2549 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 TRAV12-2A0A075B6T6 113 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 A0A087WWL8 130 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 LAGE3Q14657 143 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 MAPKAPK5-AS1Q8N8E1 139 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 NHP2Q9NX24 153 aaKnown RBP10.35□□□□□ -0.75
BNIP3-202ENST00000540159 HTN1P15515 57 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 FAM74A4Q5TZK3 123 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 ZFAND2AQ8N6M9 145 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 Q8N8P6 123 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 NPFFR1Q9GZQ6 430 aa10.35□□□□□ -0.75
BNIP3-202ENST00000540159 C9orf47Q6ZRZ4 202 aa10.34□□□□□ -0.75
BNIP3-202ENST00000540159 PIMREGQ9BSJ6 248 aa10.34□□□□□ -0.75
BNIP3-202ENST00000540159 ACANP16112 2415 aa10.34□□□□□ -0.75
BNIP3-202ENST00000540159 IGLV2-18A0A075B6J9 118 aa10.34□□□□□ -0.75
BNIP3-202ENST00000540159 SFTA2Q6UW10 78 aa10.34□□□□□ -0.75
BNIP3-202ENST00000540159 PRRC2AP48634 2157 aaKnown RBP10.34□□□□□ -0.75
BNIP3-202ENST00000540159 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
BNIP3-202ENST00000540159 DPM2O94777 84 aa10.33□□□□□ -0.76
BNIP3-202ENST00000540159 ZNF688P0C7X2 276 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms