RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 TRAV6A0A075B6T7 132 aa13.23□□□□□ -0.29
LPCAT3-210ENST00000540090 IGHV3-30P01768 117 aa13.23□□□□□ -0.29
LPCAT3-210ENST00000540090 IGHV3-33P01772 117 aa13.23□□□□□ -0.29
LPCAT3-210ENST00000540090 IGHV3-30-3P0DP02 117 aa13.23□□□□□ -0.29
LPCAT3-210ENST00000540090 IGHV3-30-5P0DP03 117 aa13.23□□□□□ -0.29
LPCAT3-210ENST00000540090 NHLH2Q02577 135 aa13.23□□□□□ -0.29
LPCAT3-210ENST00000540090 TM2D2Q9BX73 214 aa13.23□□□□□ -0.29
LPCAT3-210ENST00000540090 RBM38Q9H0Z9 239 aaKnown RBP13.23□□□□□ -0.29
LPCAT3-210ENST00000540090 WFDC2Q14508 124 aa13.22□□□□□ -0.29
LPCAT3-210ENST00000540090 LAGE3Q14657 143 aa13.22□□□□□ -0.29
LPCAT3-210ENST00000540090 LELP1Q5T871 98 aa13.22□□□□□ -0.29
LPCAT3-210ENST00000540090 SLC25A29Q8N8R3 303 aa13.22□□□□□ -0.29
LPCAT3-210ENST00000540090 OR5C1Q8NGR4 320 aa13.22□□□□□ -0.29
LPCAT3-210ENST00000540090 LYRM1O43325 122 aa13.21□□□□□ -0.29
LPCAT3-210ENST00000540090 OR7C2O60412 319 aa13.21□□□□□ -0.29
LPCAT3-210ENST00000540090 FBLL1A6NHQ2 334 aaKnown RBP13.2□□□□□ -0.3
LPCAT3-210ENST00000540090 TYMSP04818 313 aa13.2□□□□□ -0.3
LPCAT3-210ENST00000540090 PRADC1Q9BSG0 188 aa13.2□□□□□ -0.3
LPCAT3-210ENST00000540090 WDR61Q9GZS3 305 aaKnown RBP13.2□□□□□ -0.3
LPCAT3-210ENST00000540090 KCNIP2Q9NS61 270 aa13.2□□□□□ -0.3
LPCAT3-210ENST00000540090 NUDT15Q9NV35 164 aa13.2□□□□□ -0.3
LPCAT3-210ENST00000540090 TRAV21A0A0B4J279 112 aa13.19□□□□□ -0.3
LPCAT3-210ENST00000540090 TRBV6-4A0A1B0GX49 114 aa13.19□□□□□ -0.3
LPCAT3-210ENST00000540090 CIDEAO60543 219 aa13.19□□□□□ -0.3
LPCAT3-210ENST00000540090 RHOHQ15669 191 aa13.19□□□□□ -0.3
LPCAT3-210ENST00000540090 SYT8Q8NBV8 401 aa13.19□□□□□ -0.3
LPCAT3-210ENST00000540090 UBE2L3P68036 154 aaKnown RBP13.18□□□□□ -0.3
LPCAT3-210ENST00000540090 HYLS1Q96M11 299 aa13.18□□□□□ -0.3
LPCAT3-210ENST00000540090 GTSF1LQ9H1H1 148 aa13.18□□□□□ -0.3
LPCAT3-210ENST00000540090 SDF2L1Q9HCN8 221 aa13.18□□□□□ -0.3
LPCAT3-210ENST00000540090 RS1O15537 224 aa13.17□□□□□ -0.3
LPCAT3-210ENST00000540090 ZNF876PQ49A33 203 aa13.17□□□□□ -0.3
LPCAT3-210ENST00000540090 CFAP126Q5VTH2 177 aa13.17□□□□□ -0.3
LPCAT3-210ENST00000540090 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
LPCAT3-210ENST00000540090 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
LPCAT3-210ENST00000540090 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
LPCAT3-210ENST00000540090 DPPA3Q6W0C5 159 aa13.16□□□□□ -0.3
LPCAT3-210ENST00000540090 ATP6V0E2Q8NHE4 81 aa13.16□□□□□ -0.3
LPCAT3-210ENST00000540090 ATP5SQ99766 215 aa13.16□□□□□ -0.3
LPCAT3-210ENST00000540090 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
LPCAT3-210ENST00000540090 TRAV8-3A0A0A6YYJ7 113 aa13.15□□□□□ -0.3
LPCAT3-210ENST00000540090 PGPA6NDG6 321 aa13.15□□□□□ -0.3
LPCAT3-210ENST00000540090 C17orf112F2Z3M2 114 aa13.15□□□□□ -0.3
LPCAT3-210ENST00000540090 KRTAP10-4P60372 401 aaPredicted RBP13.15□□□□□ -0.3
LPCAT3-210ENST00000540090 SCXQ7RTU7 201 aa13.15□□□□□ -0.3
LPCAT3-210ENST00000540090 ASB13Q8WXK3 278 aa13.15□□□□□ -0.3
LPCAT3-210ENST00000540090 TREM1Q9NP99 234 aa13.15□□□□□ -0.3
LPCAT3-210ENST00000540090 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.14□□□□□ -0.31
LPCAT3-210ENST00000540090 LECT2O14960 151 aa13.14□□□□□ -0.31
LPCAT3-210ENST00000540090 OXTP01178 125 aa13.14□□□□□ -0.31
LPCAT3-210ENST00000540090 KHDC3LQ587J8 217 aa13.14□□□□□ -0.31
LPCAT3-210ENST00000540090 Q8N3U1 123 aa13.14□□□□□ -0.31
LPCAT3-210ENST00000540090 ARL6IP6Q8N6S5 226 aa13.14□□□□□ -0.31
LPCAT3-210ENST00000540090 CMTM2Q8TAZ6 248 aa13.14□□□□□ -0.31
LPCAT3-210ENST00000540090 IGHV3-73A0A0B4J1V6 119 aa13.13□□□□□ -0.31
LPCAT3-210ENST00000540090 F6UZH7 168 aa13.13□□□□□ -0.31
LPCAT3-210ENST00000540090 TAS2R45P59539 299 aa13.13□□□□□ -0.31
LPCAT3-210ENST00000540090 GOLT1AQ6ZVE7 132 aa13.13□□□□□ -0.31
LPCAT3-210ENST00000540090 NMES1Q9C002 83 aa13.13□□□□□ -0.31
LPCAT3-210ENST00000540090 OR5AC2Q9NZP5 309 aa13.13□□□□□ -0.31
LPCAT3-210ENST00000540090 MBD2Q9UBB5 411 aa13.13□□□□□ -0.31
LPCAT3-210ENST00000540090 TRAV8-1A0A0A6YYK1 113 aa13.12□□□□□ -0.31
LPCAT3-210ENST00000540090 LINC01620Q4KN68 170 aa13.12□□□□□ -0.31
LPCAT3-210ENST00000540090 FFAR4Q5NUL3 377 aa13.12□□□□□ -0.31
LPCAT3-210ENST00000540090 FAM74A1Q5RGS3 127 aa13.12□□□□□ -0.31
LPCAT3-210ENST00000540090 RPH3ALQ9UNE2 315 aa13.12□□□□□ -0.31
LPCAT3-210ENST00000540090 H0YIZ8 118 aa13.11□□□□□ -0.31
LPCAT3-210ENST00000540090 MGST1P10620 155 aaKnown RBP13.11□□□□□ -0.31
LPCAT3-210ENST00000540090 ASAH1Q13510 395 aa13.11□□□□□ -0.31
LPCAT3-210ENST00000540090 DAZ4Q86SG3 579 aaKnown RBP13.11□□□□□ -0.31
LPCAT3-210ENST00000540090 BAALCQ8WXS3 180 aa13.11□□□□□ -0.31
LPCAT3-210ENST00000540090 PTH2Q96A98 100 aa13.11□□□□□ -0.31
LPCAT3-210ENST00000540090 CHAC1Q9BUX1 264 aa13.11□□□□□ -0.31
LPCAT3-210ENST00000540090 SH3BGRL3Q9H299 93 aa13.11□□□□□ -0.31
LPCAT3-210ENST00000540090 DAZ3Q9NR90 486 aaKnown RBP13.11□□□□□ -0.31
LPCAT3-210ENST00000540090 EIF3GO75821 320 aaKnown RBP eCLIP13.1□□□□□ -0.31
LPCAT3-210ENST00000540090 TOR2AQ5JU69 321 aa13.1□□□□□ -0.31
LPCAT3-210ENST00000540090 C9orf85Q96MD7 179 aa13.1□□□□□ -0.31
LPCAT3-210ENST00000540090 C11orf21Q9P2W6 132 aa13.1□□□□□ -0.31
LPCAT3-210ENST00000540090 COX11Q9Y6N1 276 aa13.1□□□□□ -0.31
LPCAT3-210ENST00000540090 SIX6O95475 246 aa13.09□□□□□ -0.31
LPCAT3-210ENST00000540090 FAM240BA0A1B0GVZ2 78 aa13.08□□□□□ -0.32
LPCAT3-210ENST00000540090 RNF222A6NCQ9 220 aa13.08□□□□□ -0.32
LPCAT3-210ENST00000540090 RBFOX3A6NFN3 312 aa13.08□□□□□ -0.32
LPCAT3-210ENST00000540090 PGPEP1LA6NFU8 196 aa13.08□□□□□ -0.32
LPCAT3-210ENST00000540090 LRRC37A5PQ49AS3 106 aa13.08□□□□□ -0.32
LPCAT3-210ENST00000540090 ZNF506Q5JVG8 444 aa13.08□□□□□ -0.32
LPCAT3-210ENST00000540090 Q8N976 141 aa13.08□□□□□ -0.32
LPCAT3-210ENST00000540090 PLA2G2DQ9UNK4 145 aa13.08□□□□□ -0.32
LPCAT3-210ENST00000540090 GGTLC3B5MD39 225 aa13.07□□□□□ -0.32
LPCAT3-210ENST00000540090 TAAR5O14804 337 aa13.07□□□□□ -0.32
LPCAT3-210ENST00000540090 LINC00694P0DN24 101 aa13.07□□□□□ -0.32
LPCAT3-210ENST00000540090 ZNF80P51504 273 aaPredicted RBP13.07□□□□□ -0.32
LPCAT3-210ENST00000540090 PQLC2Q6ZP29 291 aa13.07□□□□□ -0.32
LPCAT3-210ENST00000540090 CIRBP-AS1Q8TBR5 109 aa13.07□□□□□ -0.32
LPCAT3-210ENST00000540090 PKHD1L1Q86WI1 4243 aa13.07□□□□□ -0.32
LPCAT3-210ENST00000540090 GNG5P63218 68 aa13.06□□□□□ -0.32
LPCAT3-210ENST00000540090 SGK494Q96LW2 274 aa13.06□□□□□ -0.32
LPCAT3-210ENST00000540090 GAGE12JA6NER3 117 aa13.05□□□□□ -0.32
LPCAT3-210ENST00000540090 RNASE3P12724 160 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms