RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 ABCA11PQ4W5N1 156 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CENPWQ5EE01 88 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 KLF17Q5JT82 389 aaPredicted RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF506Q5JVG8 444 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 C9orf153Q5TBE3 101 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF660Q6AZW8 331 aaPredicted RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 AMMECR1LQ6DCA0 310 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 LCN12Q6JVE5 192 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC25A34Q6PIV7 304 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 UNQ5815/PRO19632Q6UWF5 114 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 Q6ZS49 121 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF826PQ6ZT77 177 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 Q6ZVQ6 151 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 Q75L30 129 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 DAZ4Q86SG3 579 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 LINC00596Q86U02 117 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 C1orf158Q8N1D5 194 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 DEFB125Q8N687 156 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CD177Q8N6Q3 437 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 GVQW1Q8N7I0 195 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 OR4C16Q8NGL9 310 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 OR8S1Q8NH09 359 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 C15orf40Q8WUR7 153 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 RTN4IP1Q8WWV3 396 aaPredicted RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC25A46Q96AG3 418 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 FXYD5Q96DB9 178 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 LINC01587Q99440 93 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC25A21Q9BQT8 299 aaPredicted RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 OVOL2Q9BRP0 275 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PAXXQ9BUH6 204 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 BANF2Q9H503 90 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 Q9HAA7 133 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 DAZ1Q9NQZ3 744 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 DAZ3Q9NR90 486 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 TAS2R4Q9NYW5 299 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 STARD9Q9P2P6 4700 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 KLK11Q9UBX7 282 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 UQCR10Q9UDW1 63 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 OR5V1Q9UGF6 321 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 LAMTOR3Q9UHA4 124 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 AK3Q9UIJ7 227 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 SACSQ9NZJ4 4579 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 MEGF8Q7Z7M0 2845 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 NACAE9PAV3 2078 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 COL7A1Q02388 2944 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 TRAV8-6A0A0B4J262 113 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 IGKV1-6A0A0C4DH72 117 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 FAM236AA0A1B0GUQ0 79 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 FAM236BA0A1B0GV22 79 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 ODAMA1E959 279 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 MSGN1A6NI15 193 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 A6NIN4 97 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 C8orf87E5RJ46 101 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 E9PLD3 99 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 H0YJW9 148 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 LY6LH3BQJ8 138 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 M0R1W7 72 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 SNCGO76070 127 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 APOMO95445 188 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 HRASP01112 189 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 KRASP01116 189 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 IGLV1-47P01700 117 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 HLA-DQB1P01920 261 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 TFF1P04155 84 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 NMBP08949 121 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 IGLC1P0CG04 106 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 FABP2P12104 132 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 NFYBP25208 207 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 SDC2P34741 201 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 MYCNOSP40205 109 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 HINT1P49773 126 aaPredicted RBP1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 HERVK_113P63121 156 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 ADIRFQ15847 76 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF79Q15937 498 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 RTL8BQ17RB0 113 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 MPV17LQ2QL34 196 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 NSUN5P1Q3KNT7 163 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 FAM120AOSQ5T036 256 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 LYPD2Q6UXB3 125 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 CLEC19AQ6UXS0 136 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF493Q6ZR52 646 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC25A26Q70HW3 274 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 CEACAM19Q7Z692 300 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 TRAPPC6BQ86SZ2 158 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM183AQ8IXX5 376 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 Q8IYB0 196 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 KCNRGQ8N5I3 272 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 LINC00311Q8N616 119 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 FAM216BQ8N7L0 139 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNRF1Q8ND25 227 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 OR4B1Q8NGF8 309 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 OR2T10Q8NGZ9 312 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 SGMS2Q8NHU3 365 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 MRPL30Q8TCC3 161 aaKnown RBP1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 PIFOQ8TCI5 191 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 ZC2HC1AQ96GY0 325 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 KCNS1Q96KK3 526 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 CARD19Q96LW7 228 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 IGF2BP2-AS1Q96M15 143 aa1.35□□□□□ -2.19
CBX3P4-201ENST00000538909 HIST1H2BLQ99880 126 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms