RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SEC11CQ9BY50 192 aa17.51■□□□□ 0.39
HMGA2-208ENST00000537429 IGKV3D-20A0A0C4DH25 116 aa17.5■□□□□ 0.39
HMGA2-208ENST00000537429 AZU1P20160 251 aa17.49■□□□□ 0.39
HMGA2-208ENST00000537429 RRN3P1Q2M238 152 aa17.49■□□□□ 0.39
HMGA2-208ENST00000537429 DAZAP1Q96EP5 407 aaKnown RBP17.49■□□□□ 0.39
HMGA2-208ENST00000537429 KCNS1Q96KK3 526 aa17.49■□□□□ 0.39
HMGA2-208ENST00000537429 TP53TG3Q9ULZ0 132 aa17.49■□□□□ 0.39
HMGA2-208ENST00000537429 ORM1P02763 201 aa17.48■□□□□ 0.39
HMGA2-208ENST00000537429 MIFP14174 115 aa17.48■□□□□ 0.39
HMGA2-208ENST00000537429 ADIRFQ15847 76 aa17.48■□□□□ 0.39
HMGA2-208ENST00000537429 LINC01559Q495D7 138 aa17.48■□□□□ 0.39
HMGA2-208ENST00000537429 CBY3A6NI87 242 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 C10orf91Q5T1B1 145 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 NUDT10Q8NFP7 164 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 ISOC2Q96AB3 205 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 NUDT11Q96G61 164 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 RNASE7Q9H1E1 156 aaKnown RBP17.47■□□□□ 0.39
HMGA2-208ENST00000537429 COL7A1Q02388 2944 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 KRBOX1C9JBD0 128 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 M0R036 132 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 FAM231DQ6ZW35 169 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 ZNF575Q86XF7 245 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 Q8NAQ8 132 aa17.47■□□□□ 0.39
HMGA2-208ENST00000537429 RNASE8Q8TDE3 154 aaKnown RBP17.47■□□□□ 0.39
HMGA2-208ENST00000537429 B4DEV8 164 aa17.46■□□□□ 0.39
HMGA2-208ENST00000537429 GNRH2O43555 120 aa17.46■□□□□ 0.39
HMGA2-208ENST00000537429 P01737 135 aa17.46■□□□□ 0.39
HMGA2-208ENST00000537429 TYMSP04818 313 aa17.46■□□□□ 0.39
HMGA2-208ENST00000537429 PNRC1Q12796 327 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-208ENST00000537429 IBA57Q5T440 356 aaKnown RBP17.46■□□□□ 0.39
HMGA2-208ENST00000537429 TMEM263Q8WUH6 116 aaKnown RBP17.46■□□□□ 0.39
HMGA2-208ENST00000537429 RPL19P84098 196 aaKnown RBP17.45■□□□□ 0.38
HMGA2-208ENST00000537429 ZNF493Q6ZR52 646 aa17.45■□□□□ 0.38
HMGA2-208ENST00000537429 IGHV4-28A0A0C4DH34 117 aa17.44■□□□□ 0.38
HMGA2-208ENST00000537429 ERVFC1-1P60608 527 aa17.44■□□□□ 0.38
HMGA2-208ENST00000537429 C16orf74Q96GX8 76 aa17.44■□□□□ 0.38
HMGA2-208ENST00000537429 CARHSP1Q9Y2V2 147 aaKnown RBP17.44■□□□□ 0.38
HMGA2-208ENST00000537429 TRGV11A0A075B6L2 103 aa17.43■□□□□ 0.38
HMGA2-208ENST00000537429 TMEM189A5PLL7 270 aa17.43■□□□□ 0.38
HMGA2-208ENST00000537429 DEFB4AO15263 64 aa17.43■□□□□ 0.38
HMGA2-208ENST00000537429 OSTCQ9NRP0 149 aa17.43■□□□□ 0.38
HMGA2-208ENST00000537429 TENM3Q9P273 2699 aa17.43■□□□□ 0.38
HMGA2-208ENST00000537429 TMSB15BA0A087X1C1 80 aa17.42■□□□□ 0.38
HMGA2-208ENST00000537429 PLAC8L1A1L4L8 177 aa17.42■□□□□ 0.38
HMGA2-208ENST00000537429 EMP1P54849 157 aa17.42■□□□□ 0.38
HMGA2-208ENST00000537429 C11orf72Q8NBR9 251 aa17.42■□□□□ 0.38
HMGA2-208ENST00000537429 OR2D3Q8NGH3 330 aa17.42■□□□□ 0.38
HMGA2-208ENST00000537429 SFRP2Q96HF1 295 aa17.42■□□□□ 0.38
HMGA2-208ENST00000537429 MDFICQ9P1T7 246 aa17.42■□□□□ 0.38
HMGA2-208ENST00000537429 IGHV3-16A0A0C4DH30 117 aa17.42■□□□□ 0.38
HMGA2-208ENST00000537429 DNLZQ5SXM8 178 aa17.41■□□□□ 0.38
HMGA2-208ENST00000537429 RPP21Q9H633 154 aaKnown RBP17.41■□□□□ 0.38
HMGA2-208ENST00000537429 U3KQK5 164 aa17.41■□□□□ 0.38
HMGA2-208ENST00000537429 GRIFINA4D1Z8 144 aa17.4■□□□□ 0.38
HMGA2-208ENST00000537429 GATCO43716 136 aaKnown RBP17.4■□□□□ 0.38
HMGA2-208ENST00000537429 CXCL1P09341 107 aa17.4■□□□□ 0.38
HMGA2-208ENST00000537429 GSN-AS1Q9NRJ2 163 aa17.4■□□□□ 0.38
HMGA2-208ENST00000537429 ZNF415Q09FC8 603 aa17.39■□□□□ 0.37
HMGA2-208ENST00000537429 C15orf54Q8N8G6 183 aa17.39■□□□□ 0.37
HMGA2-208ENST00000537429 C11orf68Q9H3H3 251 aaKnown RBP17.39■□□□□ 0.37
HMGA2-208ENST00000537429 RNASE3P12724 160 aaKnown RBP17.38■□□□□ 0.37
HMGA2-208ENST00000537429 ASIPP42127 132 aa17.38■□□□□ 0.37
HMGA2-208ENST00000537429 TCL1AP56279 114 aa17.38■□□□□ 0.37
HMGA2-208ENST00000537429 RPS20P60866 119 aaKnown RBP17.38■□□□□ 0.37
HMGA2-208ENST00000537429 OR10G8Q8NGN5 311 aa17.38■□□□□ 0.37
HMGA2-208ENST00000537429 IL17DQ8TAD2 202 aa17.38■□□□□ 0.37
HMGA2-208ENST00000537429 A0A0J9YWU9 116 aa17.37■□□□□ 0.37
HMGA2-208ENST00000537429 V9GYV3 84 aa17.37■□□□□ 0.37
HMGA2-208ENST00000537429 XKRY2A2RUG3 117 aa17.37■□□□□ 0.37
HMGA2-208ENST00000537429 SNURFLB1AK76 121 aa17.37■□□□□ 0.37
HMGA2-208ENST00000537429 S100A4P26447 101 aaKnown RBP17.37■□□□□ 0.37
HMGA2-208ENST00000537429 CT83Q5H943 113 aa17.37■□□□□ 0.37
HMGA2-208ENST00000537429 IL36BQ9NZH7 164 aa17.37■□□□□ 0.37
HMGA2-208ENST00000537429 TIMM8BQ9Y5J9 83 aaPredicted RBP17.37■□□□□ 0.37
HMGA2-208ENST00000537429 GZMBP10144 247 aa17.36■□□□□ 0.37
HMGA2-208ENST00000537429 DAZ2Q13117 558 aaKnown RBP17.36■□□□□ 0.37
HMGA2-208ENST00000537429 C9orf85Q96MD7 179 aa17.36■□□□□ 0.37
HMGA2-208ENST00000537429 ARMS2P0C7Q2 107 aa17.35■□□□□ 0.37
HMGA2-208ENST00000537429 NOP10Q9NPE3 64 aaKnown RBP17.35■□□□□ 0.37
HMGA2-208ENST00000537429 A8MWL6 223 aa17.34■□□□□ 0.37
HMGA2-208ENST00000537429 APOC3P02656 99 aa17.34■□□□□ 0.37
HMGA2-208ENST00000537429 RNF212Q495C1 297 aa17.34■□□□□ 0.37
HMGA2-208ENST00000537429 SPXQ9BT56 116 aa17.34■□□□□ 0.37
HMGA2-208ENST00000537429 H3BVH4 76 aa17.33■□□□□ 0.37
HMGA2-208ENST00000537429 IGLC6P0CF74 106 aa17.33■□□□□ 0.37
HMGA2-208ENST00000537429 MED14OSP0DP75 135 aa17.33■□□□□ 0.37
HMGA2-208ENST00000537429 SSBP4Q9BWG4 385 aaPredicted RBP17.33■□□□□ 0.37
HMGA2-208ENST00000537429 SCRT2Q9NQ03 307 aa17.33■□□□□ 0.37
HMGA2-208ENST00000537429 DKK2Q9UBU2 259 aa17.33■□□□□ 0.37
HMGA2-208ENST00000537429 PPP1R2P9O14990 202 aa17.32■□□□□ 0.36
HMGA2-208ENST00000537429 MT-ND4LP03901 98 aa17.32■□□□□ 0.36
HMGA2-208ENST00000537429 FAM222AQ5U5X8 452 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 CLRN3Q8NCR9 226 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 TSKUQ8WUA8 353 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 GTSF1Q8WW33 167 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 ANAPC16Q96DE5 110 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 LYRM9A8MSI8 78 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 SNAI2O43623 268 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 SPINK4O60575 86 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 OR5AL1P0C617 328 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms