RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 SIGLEC8Q9NYZ4 499 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 TINCRA0A1B0GVN0 87 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 A0A1W2PPM0 123 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 H3BRN7 92 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 CRYGCP07315 174 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 UBE2BP63146 152 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 BVES-AS1Q5T3Y7 98 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 ZNF833PQ6ZTB9 187 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 BOD1L2Q8IYS8 172 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 LINC00311Q8N616 119 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 CYYR1Q96J86 154 aa8.48□□□□□ -1.05
CLIP1-209ENST00000537178 CRYBA4P53673 196 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 V9GYV3 84 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 CEND1Q8N111 149 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 DOCK11Q5JSL3 2073 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 IGHV2-70DA0A0C4DH43 119 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 GAGE12HA6NDE8 117 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 SIVA1O15304 175 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 NDUFS5O43920 106 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 SP5Q6BEB4 398 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-209ENST00000537178 TRAV12-2A0A075B6T6 113 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 WIPF3A6NGB9 483 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 J3QLI3 93 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 K7EM74 188 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 NPYP01303 97 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 RHOHQ15669 191 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 CFHR4Q92496 578 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 ATP6V0BQ99437 205 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 PKIGQ9Y2B9 76 aa8.47□□□□□ -1.05
CLIP1-209ENST00000537178 SMIM27A0A1W2PRY6 76 aa8.46□□□□□ -1.05
CLIP1-209ENST00000537178 ELANEP08246 267 aa8.46□□□□□ -1.05
CLIP1-209ENST00000537178 ZNRD1Q9P1U0 126 aa8.46□□□□□ -1.05
CLIP1-209ENST00000537178 CR1LQ2VPA4 569 aa8.46□□□□□ -1.06
CLIP1-209ENST00000537178 Q6ZWC4 215 aa8.46□□□□□ -1.06
CLIP1-209ENST00000537178 ZNF524Q96C55 264 aa8.46□□□□□ -1.06
CLIP1-209ENST00000537178 PCNX2A6NKB5 2137 aa8.46□□□□□ -1.06
CLIP1-209ENST00000537178 C22orf46C9J442 243 aa8.46□□□□□ -1.06
CLIP1-209ENST00000537178 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-209ENST00000537178 IGF2BP2-AS1Q96M15 143 aa8.46□□□□□ -1.06
CLIP1-209ENST00000537178 PCNX3Q9H6A9 2034 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 H3BMG7 143 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 K7EMI3 77 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 ZNF134P52741 427 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 ZNF493Q6ZR52 646 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 C11orf52Q96A22 123 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 PTPRQQ9UMZ3 2332 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 FUSP35637 526 aaKnown RBP eCLIP8.45□□□□□ -1.06
CLIP1-209ENST00000537178 C15orf53Q8NAA6 179 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 CFC1BP0CG36 223 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 CFC1P0CG37 223 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 LOXP28300 417 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-209ENST00000537178 TEX36Q5VZQ5 186 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 MRPL53Q96EL3 112 aaKnown RBP8.45□□□□□ -1.06
CLIP1-209ENST00000537178 ORMDL1Q9P0S3 153 aa8.45□□□□□ -1.06
CLIP1-209ENST00000537178 PHF3Q92576 2039 aaKnown RBP8.44□□□□□ -1.06
CLIP1-209ENST00000537178 IGHV7-4-1A0A0J9YVY3 117 aa8.44□□□□□ -1.06
CLIP1-209ENST00000537178 IGKV1-39P01597 117 aa8.44□□□□□ -1.06
CLIP1-209ENST00000537178 IGKV1D-39P04432 117 aa8.44□□□□□ -1.06
CLIP1-209ENST00000537178 WT1-ASQ06250 92 aa8.44□□□□□ -1.06
CLIP1-209ENST00000537178 SHISA9B4DS77 424 aa8.44□□□□□ -1.06
CLIP1-209ENST00000537178 C10orf142B7Z368 130 aa8.44□□□□□ -1.06
CLIP1-209ENST00000537178 TEX48A0A1B0GUV7 120 aa8.44□□□□□ -1.06
CLIP1-209ENST00000537178 IGLC1P0CG04 106 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 ZC2HC1AQ96GY0 325 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-209ENST00000537178 NDUFS7O75251 213 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 ACYP1P07311 99 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 HERV-K104P63124 156 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 C12orf74Q32Q52 190 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 TNCP24821 2201 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 IGKV2D-24A0A075B6R9 120 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 BAALC-AS2P0C853 105 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 EXPH5Q8NEV8 1989 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 LENEPQ9Y5L5 61 aa8.43□□□□□ -1.06
CLIP1-209ENST00000537178 MALRD1Q5VYJ5 2156 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 H3BUA1 57 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 C17orf58Q2M2W7 97 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 C5orf47Q569G3 176 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 FOXI2Q6ZQN5 318 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 Q96MF0 132 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 ZMAT4Q9H898 229 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 GTF3C1Q12789 2109 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 FAM208BQ5VWN6 2430 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 ETDCA0A1B0GVM5 59 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 AMTNQ6UX39 209 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 DOCK8Q8NF50 2099 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 IGKV1OR2-108A0A075B7D4 117 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 NOTCH2Q04721 2471 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 YLPM1P49750 1951 aaKnown RBP8.42□□□□□ -1.06
CLIP1-209ENST00000537178 A0A096LPF7 62 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 XCL1P47992 114 aa8.42□□□□□ -1.06
CLIP1-209ENST00000537178 IGLV3-9A0A075B6K5 115 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 C1orf43Q9BWL3 253 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 Q9H8V8 135 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 NACAE9PAV3 2078 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 Q6ZR03 302 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 MAPK1IP1LQ8NDC0 245 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms