RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 HSPB11Q9Y547 144 aa2.36□□□□□ -2.03
SNHG1-203ENST00000537024 RFNGQ9Y644 331 aa2.36□□□□□ -2.03
SNHG1-203ENST00000537024 ENPP4Q9Y6X5 453 aa2.36□□□□□ -2.03
SNHG1-203ENST00000537024 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
SNHG1-203ENST00000537024 USH2AO75445 5202 aa2.36□□□□□ -2.03
SNHG1-203ENST00000537024 IGLV4-60A0A075B6I1 120 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 IGHV3-43A0A0B4J1X8 118 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 TRAV3A0A0B4J244 114 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 LRCOL1A6NCL2 159 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 SCO1O75880 301 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 PRH1P02810 166 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 ATP5G1P05496 136 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 ATF1P18846 271 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 PSMB9P28065 219 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 DAD1P61803 113 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 RHOBP62745 196 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 CAV1Q03135 178 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 TMEM128Q5BJH2 165 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 ZNF773Q6PK81 442 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 IDO2Q6ZQW0 420 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 Q8N814 137 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 ERMAPQ96PL5 475 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-203ENST00000537024 C12orf57Q99622 126 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 C2orf88Q9BSF0 95 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 CHCHD7Q9BUK0 85 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 GNB1LQ9BYB4 327 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 C21orf62Q9NYP8 219 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 RBM12B-AS1Q9P1G2 102 aa2.35□□□□□ -2.03
SNHG1-203ENST00000537024 IGHV6-1A0A0B4J1U7 121 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 TRAV8-2A0A0B4J237 113 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 A0A1W2PRE2 83 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 MAP1LC3B2A6NCE7 125 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 ZNF705FA8MVS1 300 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-203ENST00000537024 HMGB3O15347 200 aaKnown RBP2.34□□□□□ -2.03
SNHG1-203ENST00000537024 PDCD6O75340 191 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 ZNF324O75467 553 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-203ENST00000537024 HTR1AP08908 422 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 ZNF705DP0CH99 300 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-203ENST00000537024 ZNF705BP0CI00 300 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-203ENST00000537024 APELAP0DMC3 54 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 GPX2P18283 190 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 DEFA3P59666 94 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 DEFB131AP59861 70 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 KRTAP10-8P60410 259 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 CKS1BP61024 79 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 GNG5P63218 68 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 PMAIP1Q13794 54 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 JOSD1Q15040 202 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-203ENST00000537024 PMVKQ15126 192 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 TMEM78Q5T7P6 136 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 SAMD13Q5VXD3 122 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 ZNF705AQ6ZN79 300 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-203ENST00000537024 ZNF833PQ6ZTB9 187 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 C1orf158Q8N1D5 194 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 OR51A2Q8NGJ7 313 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 MCFD2Q8NI22 146 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 LINC01587Q99440 93 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 RNF5Q99942 180 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 VPS25Q9BRG1 176 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 CCDC32Q9BV29 185 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 MAP1LC3BQ9GZQ8 125 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 SLC25A31Q9H0C2 315 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 GPR84Q9NQS5 396 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 UQCC1Q9NVA1 299 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 TAS2R1Q9NYW7 299 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 SNX12Q9UMY4 172 aa2.34□□□□□ -2.03
SNHG1-203ENST00000537024 NEBP20929 6669 aa2.34□□□□□ -2.04
SNHG1-203ENST00000537024 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.04
SNHG1-203ENST00000537024 IGKV2-28A0A075B6P5 120 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 C7orf66A4D0T2 115 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 CCDC160A6NGH7 325 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 OR5H14A6NHG9 310 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 INMT-MINDY4F8WBC2 141 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 K7EP13 123 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 ORC5O43913 435 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 ZNF682O95780 498 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 CYB5AP00167 134 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 IGKV2D-28P01615 120 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 TTRP02766 147 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 SULT1A3P0DMM9 295 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 SULT1A4P0DMN0 295 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 ESRGQ1W209 222 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 LPCAT3Q6P1A2 487 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 TBPL2Q6SJ96 375 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 LINC00337Q8N6G1 96 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 LHFPL5Q8TAF8 219 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 ARL11Q969Q4 196 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 ZNF436Q9C0F3 470 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-203ENST00000537024 DAZ1Q9NQZ3 744 aaKnown RBP2.33□□□□□ -2.04
SNHG1-203ENST00000537024 JPT1Q9UK76 154 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 V9GYS6 101 aa2.33□□□□□ -2.04
SNHG1-203ENST00000537024 IGKV3-7A0A075B6H7 116 aa2.32□□□□□ -2.04
SNHG1-203ENST00000537024 IGHV3OR16-8A0A075B7F1 116 aa2.32□□□□□ -2.04
SNHG1-203ENST00000537024 IGKV1-12A0A0C4DH73 117 aa2.32□□□□□ -2.04
SNHG1-203ENST00000537024 A6NIN4 97 aa2.32□□□□□ -2.04
SNHG1-203ENST00000537024 FFAR1O14842 300 aa2.32□□□□□ -2.04
SNHG1-203ENST00000537024 DLEU1O43261 78 aa2.32□□□□□ -2.04
SNHG1-203ENST00000537024 IGKV1D-12P01611 117 aa2.32□□□□□ -2.04
SNHG1-203ENST00000537024 MAS1P04201 325 aa2.32□□□□□ -2.04
SNHG1-203ENST00000537024 IL4P05112 153 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms