RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 NPC2P61916 151 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 NDUFA11Q86Y39 141 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 LINC00479Q96M42 142 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 OVOL2Q9BRP0 275 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 COL5A1P20908 1838 aaPredicted RBP8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 ERCC8Q13216 396 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 GAGE2AQ6NT46 116 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 Q8N7P7 452 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 CEP192Q8TEP8 1941 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 ZNF493Q6ZR52 646 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 WFDC11Q8NEX6 87 aa8.85□□□□□ -0.99
AMBRA1-211ENST00000533727 SMKR1H3BMG3 65 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 WISP2O76076 250 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 LINC00158P58513 81 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 BLCAPP62952 87 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 CT83Q5H943 113 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 IGHV1-24A0A0C4DH33 117 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 ARMS2P0C7Q2 107 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 COA6Q5JTJ3 125 aaKnown RBP8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 NCOR2Q9Y618 2525 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 CCL25O15444 150 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 LY6G5BQ8NDX9 201 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 PHLDA1Q8WV24 401 aaPredicted RBP8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 PYGO2Q9BRQ0 406 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 NOTCH3Q9UM47 2321 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 GAGE5Q13069 117 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 GAGE6Q13070 117 aa8.84□□□□□ -0.99
AMBRA1-211ENST00000533727 INAFM2P0DMQ5 153 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 RASL10AQ92737 203 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 IGLV11-55A0A075B6I3 123 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 LGALS9BQ3B8N2 356 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 LGALS9CQ6DKI2 356 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 SH2D6Q7Z4S9 175 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 ZNF491Q8N8L2 437 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 AJUBAQ96IF1 538 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 DNAJC30Q96LL9 226 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 MED13Q9UHV7 2174 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 PRB4P10163 310 aaPredicted RBP8.83□□□□□ -1
AMBRA1-211ENST00000533727 IGFL4Q6B9Z1 124 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 C11orf71Q6IPW1 123 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 NEGR1Q7Z3B1 354 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 GPHB5Q86YW7 130 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 MBD6Q96DN6 1003 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 CSTL1Q9H114 145 aa8.83□□□□□ -1
AMBRA1-211ENST00000533727 KNCNA6PVL3 124 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 H3BMG7 143 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 ZNF726P1Q15940 193 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 Q6YL49 198 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 WIPF2Q8TF74 440 aaPredicted RBP8.82□□□□□ -1
AMBRA1-211ENST00000533727 V9GYV3 84 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 TRBV25-1A0A075B6N4 114 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 B5MCH6 92 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 PAX4O43316 350 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 CYYR1Q96J86 154 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 SMAD5-AS1Q9Y6J3 95 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 RBAKDNA6NC62 111 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 PAX9P55771 341 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 MYMXA0A1B0GTQ4 84 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 DEFB125Q8N687 156 aa8.82□□□□□ -1
AMBRA1-211ENST00000533727 IGHV3-73A0A0B4J1V6 119 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 INS-IGF2F8WCM5 200 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 SLURP1P55000 103 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 MSMPQ1L6U9 139 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 FAM231DQ6ZW35 169 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 C14orf178Q8N769 122 aaPredicted RBP8.81□□□□□ -1
AMBRA1-211ENST00000533727 CRYGCP07315 174 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 RNASE8Q8TDE3 154 aaKnown RBP8.81□□□□□ -1
AMBRA1-211ENST00000533727 TIMM21Q9BVV7 248 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 TAL2Q16559 108 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 Q6ZVH6 145 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 CITED2Q99967 270 aaPredicted RBP8.81□□□□□ -1
AMBRA1-211ENST00000533727 LAMTOR3Q9UHA4 124 aa8.81□□□□□ -1
AMBRA1-211ENST00000533727 SIVA1O15304 175 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 SPART-AS1P0CW21 52 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 JPT2Q9H910 190 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 ODF3BA8MYP8 253 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 PMVKQ15126 192 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 LINC00574Q9H8X3 128 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 KLK5Q9Y337 293 aaPredicted RBP8.8□□□□□ -1
AMBRA1-211ENST00000533727 VWC2LB2RUY7 222 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 LYPD6BQ8NI32 183 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 ZNF625Q96I27 306 aaPredicted RBP8.8□□□□□ -1
AMBRA1-211ENST00000533727 PRR25Q96S07 402 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 SPANXCQ9NY87 97 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 INAFM1C9JVW0 142 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 RHOHQ15669 191 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 DEFB136Q30KP8 78 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 PIFOQ8TCI5 191 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 MRAPQ8TCY5 172 aa8.8□□□□□ -1
AMBRA1-211ENST00000533727 LEPROTO15243 131 aa8.79□□□□□ -1
AMBRA1-211ENST00000533727 VWC2Q2TAL6 325 aa8.79□□□□□ -1
AMBRA1-211ENST00000533727 AMTNQ6UX39 209 aa8.79□□□□□ -1
AMBRA1-211ENST00000533727 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
AMBRA1-211ENST00000533727 SMIM27A0A1W2PRY6 76 aa8.79□□□□□ -1
AMBRA1-211ENST00000533727 TRACP01848 142 aa8.79□□□□□ -1
AMBRA1-211ENST00000533727 CEND1Q8N111 149 aa8.79□□□□□ -1
AMBRA1-211ENST00000533727 C16orf74Q96GX8 76 aa8.79□□□□□ -1
AMBRA1-211ENST00000533727 TMEM213A2RRL7 107 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 PRSS46E5RG02 174 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms