RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 APOC4P55056 127 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 DNLZQ5SXM8 178 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 COPS9Q8WXC6 57 aa11.65□□□□□ -0.54
USP47-207ENST00000527733 C14orf144Q96I85 54 aa11.65□□□□□ -0.54
USP47-207ENST00000527733 DPM2O94777 84 aa11.65□□□□□ -0.54
USP47-207ENST00000527733 LOC105371267A0A1B0GV96 52 aa11.65□□□□□ -0.54
USP47-207ENST00000527733 JOSD1Q15040 202 aaPredicted RBP11.65□□□□□ -0.54
USP47-207ENST00000527733 MRAP2Q96G30 205 aa11.65□□□□□ -0.54
USP47-207ENST00000527733 K7EN84 100 aa11.65□□□□□ -0.55
USP47-207ENST00000527733 RPL13AP40429 203 aaKnown RBP11.65□□□□□ -0.55
USP47-207ENST00000527733 A8MWV9 139 aa11.64□□□□□ -0.55
USP47-207ENST00000527733 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
USP47-207ENST00000527733 TNFRSF6BO95407 300 aa11.64□□□□□ -0.55
USP47-207ENST00000527733 LBHQ53QV2 105 aaPredicted RBP11.64□□□□□ -0.55
USP47-207ENST00000527733 A0A087WX48 190 aa11.64□□□□□ -0.55
USP47-207ENST00000527733 C9orf66Q5T8R8 295 aa11.64□□□□□ -0.55
USP47-207ENST00000527733 BBC3Q96PG8 261 aaPredicted RBP11.64□□□□□ -0.55
USP47-207ENST00000527733 TOMM7Q9P0U1 55 aa11.64□□□□□ -0.55
USP47-207ENST00000527733 XIRP2A4UGR9 3374 aa11.64□□□□□ -0.55
USP47-207ENST00000527733 DOPEY1Q5JWR5 2465 aa11.64□□□□□ -0.55
USP47-207ENST00000527733 MYCNOSP40205 109 aa11.63□□□□□ -0.55
USP47-207ENST00000527733 ADARB2-AS1A8MUL3 147 aa11.63□□□□□ -0.55
USP47-207ENST00000527733 TRBV12-3P01733 135 aa11.63□□□□□ -0.55
USP47-207ENST00000527733 C4orf3Q8WVX3 66 aa11.63□□□□□ -0.55
USP47-207ENST00000527733 CCDC140Q96MF4 163 aa11.63□□□□□ -0.55
USP47-207ENST00000527733 UNQ9165/PRO28630Q6UXU0 137 aa11.63□□□□□ -0.55
USP47-207ENST00000527733 GTF2H5Q6ZYL4 71 aa11.63□□□□□ -0.55
USP47-207ENST00000527733 TRPT1Q86TN4 253 aaKnown RBP11.63□□□□□ -0.55
USP47-207ENST00000527733 CITED2Q99967 270 aaPredicted RBP11.63□□□□□ -0.55
USP47-207ENST00000527733 SETD2Q9BYW2 2564 aaPredicted RBP11.62□□□□□ -0.55
USP47-207ENST00000527733 Q0VG73 95 aa11.62□□□□□ -0.55
USP47-207ENST00000527733 CHTOPQ9Y3Y2 248 aaKnown RBP11.62□□□□□ -0.55
USP47-207ENST00000527733 TRAV9-2A0A087WT02 112 aa11.62□□□□□ -0.55
USP47-207ENST00000527733 EGR2P11161 476 aaPredicted RBP11.62□□□□□ -0.55
USP47-207ENST00000527733 KRTAP10-9P60411 292 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 DEFB104AQ8WTQ1 72 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 PYGO2Q9BRQ0 406 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 SPXQ9BT56 116 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 ASPHD1Q5U4P2 390 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 TMEM158Q8WZ71 300 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 AZU1P20160 251 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 Q8N6K4 173 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 IGLC2P0DOY2 106 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 C18orf32Q8TCD1 76 aa11.61□□□□□ -0.55
USP47-207ENST00000527733 SNAI2O43623 268 aa11.6□□□□□ -0.55
USP47-207ENST00000527733 COX6CP09669 75 aa11.6□□□□□ -0.55
USP47-207ENST00000527733 APRG1Q8IVJ8 170 aa11.6□□□□□ -0.55
USP47-207ENST00000527733 SZT2Q5T011 3432 aa11.6□□□□□ -0.55
USP47-207ENST00000527733 IGKCP01834 107 aa11.6□□□□□ -0.55
USP47-207ENST00000527733 DAD1P61803 113 aa11.6□□□□□ -0.55
USP47-207ENST00000527733 TRAV25A0A0B4J276 109 aa11.59□□□□□ -0.55
USP47-207ENST00000527733 MRPL51Q4U2R6 128 aaKnown RBP11.59□□□□□ -0.55
USP47-207ENST00000527733 GAGE12BA1L429 117 aa11.59□□□□□ -0.55
USP47-207ENST00000527733 GAGE7O76087 117 aa11.59□□□□□ -0.55
USP47-207ENST00000527733 GAGE12FP0CL80 117 aa11.59□□□□□ -0.55
USP47-207ENST00000527733 GAGE12GP0CL81 117 aa11.59□□□□□ -0.55
USP47-207ENST00000527733 GAGE12IP0CL82 117 aa11.59□□□□□ -0.55
USP47-207ENST00000527733 SLAQ13239 276 aa11.59□□□□□ -0.55
USP47-207ENST00000527733 PHLDA1Q8WV24 401 aaPredicted RBP11.59□□□□□ -0.55
USP47-207ENST00000527733 POLR3KQ9Y2Y1 108 aaPredicted RBP11.59□□□□□ -0.55
USP47-207ENST00000527733 H7C2G1 150 aa11.59□□□□□ -0.55
USP47-207ENST00000527733 OR5A1Q8NGJ0 315 aa11.59□□□□□ -0.55
USP47-207ENST00000527733 INAFM1C9JVW0 142 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 CRPP02741 224 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 CTAG1AP78358 180 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 CFHR3Q02985 330 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 KLF12Q9Y4X4 402 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 HCFC1P51610 2035 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 IGKV3D-20A0A0C4DH25 116 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 PTPRBP23467 1997 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 PRAC2D3DTV9 90 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 CFAP161Q6P656 301 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 POLQO75417 2590 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 A0A087X0K7 114 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 IGHV3-16A0A0C4DH30 117 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 GNRH2O43555 120 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 CD300EQ496F6 205 aaPredicted RBP11.58□□□□□ -0.56
USP47-207ENST00000527733 C1orf159Q96HA4 380 aa11.58□□□□□ -0.56
USP47-207ENST00000527733 C3orf79P0CE67 100 aa11.57□□□□□ -0.56
USP47-207ENST00000527733 MALP21145 153 aa11.57□□□□□ -0.56
USP47-207ENST00000527733 WIPF2Q8TF74 440 aaPredicted RBP11.57□□□□□ -0.56
USP47-207ENST00000527733 TEX43Q6ZNM6 134 aa11.57□□□□□ -0.56
USP47-207ENST00000527733 LINC00469Q8N7U9 141 aa11.57□□□□□ -0.56
USP47-207ENST00000527733 LOC107984156A0A0G2JMH3 177 aa11.57□□□□□ -0.56
USP47-207ENST00000527733 PAX2Q02962 417 aa11.57□□□□□ -0.56
USP47-207ENST00000527733 ARL17AQ8IVW1 177 aa11.57□□□□□ -0.56
USP47-207ENST00000527733 TMEM61Q8N0U2 210 aa11.57□□□□□ -0.56
USP47-207ENST00000527733 MBD6Q96DN6 1003 aa11.57□□□□□ -0.56
USP47-207ENST00000527733 Q6ZSV7 163 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 ZNF503Q96F45 646 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 GSN-AS1Q9NRJ2 163 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 SDHAF1A6NFY7 115 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 F5H768 121 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 C9orf47Q6ZRZ4 202 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 DLX4Q92988 240 aaPredicted RBP11.56□□□□□ -0.56
USP47-207ENST00000527733 IGF2BP2-AS1Q96M15 143 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 M0R2P5 195 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 SEC11AP67812 179 aa11.56□□□□□ -0.56
USP47-207ENST00000527733 SRSF2Q01130 221 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms