RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 U3KQK5 164 aa9.88□□□□□ -0.83
CD44-224ENST00000526669 GNRH2O43555 120 aa9.87□□□□□ -0.83
CD44-224ENST00000526669 TYMSP04818 313 aa9.87□□□□□ -0.83
CD44-224ENST00000526669 RPL19P84098 196 aaKnown RBP9.87□□□□□ -0.83
CD44-224ENST00000526669 UQCC3Q6UW78 93 aa9.87□□□□□ -0.83
CD44-224ENST00000526669 IGKV3D-20A0A0C4DH25 116 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 SMIM9A6NGZ8 99 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 B4DEV8 164 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 ADIRFQ15847 76 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 TMEM241Q24JQ0 296 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 FAM74A3Q4VXF1 159 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 SMIM12Q96EX1 92 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 C16orf74Q96GX8 76 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 RNASE7Q9H1E1 156 aaKnown RBP9.86□□□□□ -0.83
CD44-224ENST00000526669 SDF2L1Q9HCN8 221 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 NAT8Q9UHE5 227 aa9.86□□□□□ -0.83
CD44-224ENST00000526669 GRIFINA4D1Z8 144 aa9.85□□□□□ -0.83
CD44-224ENST00000526669 ADCYAP1P18509 176 aa9.85□□□□□ -0.83
CD44-224ENST00000526669 RPL23P62829 140 aaKnown RBP9.85□□□□□ -0.83
CD44-224ENST00000526669 LINC01551Q86U37 167 aa9.85□□□□□ -0.83
CD44-224ENST00000526669 RNASE8Q8TDE3 154 aaKnown RBP9.85□□□□□ -0.83
CD44-224ENST00000526669 TMEM263Q8WUH6 116 aaKnown RBP9.85□□□□□ -0.83
CD44-224ENST00000526669 DAZAP1Q96EP5 407 aaKnown RBP9.85□□□□□ -0.83
CD44-224ENST00000526669 LINC00467Q9BRT7 94 aa9.85□□□□□ -0.83
CD44-224ENST00000526669 GSN-AS1Q9NRJ2 163 aa9.85□□□□□ -0.83
CD44-224ENST00000526669 CELA1Q9UNI1 258 aa9.85□□□□□ -0.83
CD44-224ENST00000526669 TIMM8BQ9Y5J9 83 aaPredicted RBP9.85□□□□□ -0.83
CD44-224ENST00000526669 LY96Q9Y6Y9 160 aa9.85□□□□□ -0.83
CD44-224ENST00000526669 TRGV11A0A075B6L2 103 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 PLAC8L1A1L4L8 177 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 TMEM218A2RU14 115 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 C19orf71A6NCJ1 209 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 KRBOX1C9JBD0 128 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 F8W036 122 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 LINC01559Q495D7 138 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 SLC7A5P1Q8MH63 180 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 C11orf72Q8NBR9 251 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 NUDT10Q8NFP7 164 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 NUDT11Q96G61 164 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 KCNS1Q96KK3 526 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 BIN3Q9NQY0 253 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 MDFICQ9P1T7 246 aa9.84□□□□□ -0.83
CD44-224ENST00000526669 IGHV3-16A0A0C4DH30 117 aa9.83□□□□□ -0.84
CD44-224ENST00000526669 SNURFLB1AK76 121 aa9.83□□□□□ -0.84
CD44-224ENST00000526669 P01737 135 aa9.83□□□□□ -0.84
CD44-224ENST00000526669 GZMBP10144 247 aa9.83□□□□□ -0.84
CD44-224ENST00000526669 TDRG1Q3Y452 100 aa9.83□□□□□ -0.84
CD44-224ENST00000526669 OR2D3Q8NGH3 330 aa9.83□□□□□ -0.84
CD44-224ENST00000526669 C11orf68Q9H3H3 251 aaKnown RBP9.83□□□□□ -0.84
CD44-224ENST00000526669 NOP10Q9NPE3 64 aaKnown RBP9.83□□□□□ -0.84
CD44-224ENST00000526669 H3BVH4 76 aa9.82□□□□□ -0.84
CD44-224ENST00000526669 GATCO43716 136 aaKnown RBP9.82□□□□□ -0.84
CD44-224ENST00000526669 IBA57Q5T440 356 aaKnown RBP9.82□□□□□ -0.84
CD44-224ENST00000526669 FAM222AQ5U5X8 452 aa9.82□□□□□ -0.84
CD44-224ENST00000526669 ZNF493Q6ZR52 646 aa9.82□□□□□ -0.84
CD44-224ENST00000526669 ISOC2Q96AB3 205 aa9.82□□□□□ -0.84
CD44-224ENST00000526669 S100A4P26447 101 aaKnown RBP9.81□□□□□ -0.84
CD44-224ENST00000526669 ASIPP42127 132 aa9.81□□□□□ -0.84
CD44-224ENST00000526669 TCL1AP56279 114 aa9.81□□□□□ -0.84
CD44-224ENST00000526669 ERVFC1-1P60608 527 aa9.81□□□□□ -0.84
CD44-224ENST00000526669 RNASE3P12724 160 aaKnown RBP9.8□□□□□ -0.84
CD44-224ENST00000526669 ZNF575Q86XF7 245 aa9.8□□□□□ -0.84
CD44-224ENST00000526669 IL17DQ8TAD2 202 aa9.8□□□□□ -0.84
CD44-224ENST00000526669 RPP21Q9H633 154 aaKnown RBP9.8□□□□□ -0.84
CD44-224ENST00000526669 EDA2RQ9HAV5 297 aa9.8□□□□□ -0.84
CD44-224ENST00000526669 MRPL16Q9NX20 251 aaKnown RBP9.8□□□□□ -0.84
CD44-224ENST00000526669 DKK2Q9UBU2 259 aa9.8□□□□□ -0.84
CD44-224ENST00000526669 TRGV1A0A0A0MS02 117 aa9.79□□□□□ -0.84
CD44-224ENST00000526669 CXorf65A6NEN9 183 aa9.79□□□□□ -0.84
CD44-224ENST00000526669 NANOS2P60321 138 aaKnown RBP9.79□□□□□ -0.84
CD44-224ENST00000526669 Q6ZTI0 123 aa9.79□□□□□ -0.84
CD44-224ENST00000526669 FAM231DQ6ZW35 169 aa9.79□□□□□ -0.84
CD44-224ENST00000526669 SFRP2Q96HF1 295 aa9.79□□□□□ -0.84
CD44-224ENST00000526669 C9orf85Q96MD7 179 aa9.79□□□□□ -0.84
CD44-224ENST00000526669 SEC11CQ9BY50 192 aa9.79□□□□□ -0.84
CD44-224ENST00000526669 DYNC2H1Q8NCM8 4307 aaKnown RBP9.79□□□□□ -0.84
CD44-224ENST00000526669 MUC21A0A0G2JKD1 596 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 MUC21A0A140T8X8 626 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 GAGE12BA1L429 117 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 GAGE7O76087 117 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 ARMS2P0C7Q2 107 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 GAGE12FP0CL80 117 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 GAGE12GP0CL81 117 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 GAGE12IP0CL82 117 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 SPART-AS1P0CW21 52 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 DEFB130BP0DP73 79 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 DEFB130AP0DP74 79 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 OR10G8Q8NGN5 311 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 TPPP3Q9BW30 176 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
CD44-224ENST00000526669 LYRM9A8MSI8 78 aa9.77□□□□□ -0.85
CD44-224ENST00000526669 SPINK4O60575 86 aa9.77□□□□□ -0.85
CD44-224ENST00000526669 RPS20P60866 119 aaKnown RBP9.77□□□□□ -0.85
CD44-224ENST00000526669 SSTP61278 116 aa9.77□□□□□ -0.85
CD44-224ENST00000526669 DAD1P61803 113 aa9.77□□□□□ -0.85
CD44-224ENST00000526669 DAZ2Q13117 558 aaKnown RBP9.77□□□□□ -0.85
CD44-224ENST00000526669 C15orf54Q8N8G6 183 aa9.77□□□□□ -0.85
CD44-224ENST00000526669 C11orf45Q8TAV5 145 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms