RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 A8MWL6 223 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 CSTL1Q9H114 145 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 IGKV3D-20A0A0C4DH25 116 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 TRBV6-1A0A0K0K1D8 114 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 XKRY2A2RUG3 117 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 KLLNB2CW77 178 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 RBMY1A1P0DJD3 496 aaKnown RBP6.85□□□□□ -1.31
SDCBP-212ENST00000523483 RBMY1CP0DJD4 496 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 CRISP2P16562 243 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 RBMY1FQ15415 496 aaKnown RBP6.85□□□□□ -1.31
SDCBP-212ENST00000523483 KCNIP4Q6PIL6 250 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 TGIF2-C20orf24A0A0A6YYL0 155 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 C19orf71A6NCJ1 209 aa6.85□□□□□ -1.31
SDCBP-212ENST00000523483 CRXO43186 299 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-212ENST00000523483 M0R381 172 aa6.84□□□□□ -1.31
SDCBP-212ENST00000523483 CTDSP1Q9GZU7 261 aa6.84□□□□□ -1.31
SDCBP-212ENST00000523483 SAMD5Q5TGI4 173 aa6.84□□□□□ -1.31
SDCBP-212ENST00000523483 IL36BQ9NZH7 164 aa6.84□□□□□ -1.31
SDCBP-212ENST00000523483 IGHV1OR15-1A0A075B7D0 117 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 FAM231DQ6ZW35 169 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 TSKUQ8WUA8 353 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 GTSF1Q8WW33 167 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 FAM19A4Q96LR4 140 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 ZMAT5Q9UDW3 170 aaKnown RBP6.83□□□□□ -1.32
SDCBP-212ENST00000523483 NACAE9PAV3 2078 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 DEFB4AO15263 64 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 ASIPP42127 132 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 FER1L6-AS1Q8NA97 138 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 FRZBQ92765 325 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 BORCS7Q96B45 105 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 FAM110AQ9BQ89 295 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 C1QTNF4Q9BXJ3 329 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 MDFICQ9P1T7 246 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 GOLT1BQ9Y3E0 138 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 PHLDA3Q9Y5J5 127 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 A0A087WWC5 75 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 SPANXN1Q5VSR9 72 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 NUP35Q8NFH5 326 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 ODF3Q96PU9 254 aa6.83□□□□□ -1.32
SDCBP-212ENST00000523483 WIPF1O43516 503 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 ZNF324O75467 553 aaPredicted RBP6.82□□□□□ -1.32
SDCBP-212ENST00000523483 TYMSP04818 313 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 FRMD6-AS1P0C7T7 363 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 APOC4P55056 127 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 NAT8BQ9UHF3 227 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 CXCL1P09341 107 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 RPS10P46783 165 aaKnown RBP6.82□□□□□ -1.32
SDCBP-212ENST00000523483 EGFEM1PQ0D2K5 195 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 ELOBQ15370 118 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 TWIST1Q15672 202 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 Q6AWC8 147 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 GSN-AS1Q9NRJ2 163 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 TRBV7-9A0A0J9YWB2 115 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 OR10AG1Q8NH19 301 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 KCNS1Q96KK3 526 aa6.82□□□□□ -1.32
SDCBP-212ENST00000523483 GIG44P09565 113 aaPredicted RBP6.81□□□□□ -1.32
SDCBP-212ENST00000523483 AZU1P20160 251 aa6.81□□□□□ -1.32
SDCBP-212ENST00000523483 LINC01559Q495D7 138 aa6.81□□□□□ -1.32
SDCBP-212ENST00000523483 C1orf158Q8N1D5 194 aa6.81□□□□□ -1.32
SDCBP-212ENST00000523483 RETNQ9HD89 108 aa6.81□□□□□ -1.32
SDCBP-212ENST00000523483 TMA7Q9Y2S6 64 aaKnown RBP6.81□□□□□ -1.32
SDCBP-212ENST00000523483 RRN3P1Q2M238 152 aa6.81□□□□□ -1.32
SDCBP-212ENST00000523483 FAM210BQ96KR6 192 aa6.81□□□□□ -1.32
SDCBP-212ENST00000523483 MORN3Q6PF18 240 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-212ENST00000523483 BTF3L4Q96K17 158 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 SSBP4Q9BWG4 385 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-212ENST00000523483 MSRB1Q9NZV6 116 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 AMBPP02760 352 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 RPS20P60866 119 aaKnown RBP6.8□□□□□ -1.32
SDCBP-212ENST00000523483 FAM74A4Q5TZK3 123 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 PYGO2Q9BRQ0 406 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 TMEM242Q9NWH2 141 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 NTF3P20783 257 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 COX8CQ7Z4L0 72 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 OR11H2Q8NH07 326 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 RCHY1Q96PM5 261 aa6.8□□□□□ -1.32
SDCBP-212ENST00000523483 A0A1B0GUT8 65 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 TENM3Q9P273 2699 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 CMYA5Q8N3K9 4069 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 CXorf65A6NEN9 183 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 SNURFLB1AK76 121 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 CT83Q5H943 113 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 IMMP2LQ96T52 175 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 TRGV11A0A075B6L2 103 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 K7EIL1 84 aa6.79□□□□□ -1.32
SDCBP-212ENST00000523483 FOXA3P55318 350 aaPredicted RBP6.79□□□□□ -1.32
SDCBP-212ENST00000523483 TRGV1A0A0A0MS02 117 aa6.78□□□□□ -1.32
SDCBP-212ENST00000523483 ZNF876PQ49A33 203 aa6.78□□□□□ -1.32
SDCBP-212ENST00000523483 DMRTA1Q5VZB9 504 aa6.78□□□□□ -1.32
SDCBP-212ENST00000523483 NOP10Q9NPE3 64 aaKnown RBP6.78□□□□□ -1.32
SDCBP-212ENST00000523483 MRPL16Q9NX20 251 aaKnown RBP6.78□□□□□ -1.32
SDCBP-212ENST00000523483 IGHV3-73A0A0B4J1V6 119 aa6.78□□□□□ -1.32
SDCBP-212ENST00000523483 A8MTW9 85 aa6.78□□□□□ -1.32
SDCBP-212ENST00000523483 RNASE3P12724 160 aaKnown RBP6.78□□□□□ -1.32
SDCBP-212ENST00000523483 KIAA1644Q3SXP7 199 aa6.78□□□□□ -1.32
SDCBP-212ENST00000523483 A0A087WWL8 130 aa6.78□□□□□ -1.32
SDCBP-212ENST00000523483 JPT2Q9H910 190 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms