RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 F2Z2F3 143 aa6.32□□□□□ -1.4
VAPB-206ENST00000520497 CA1P00915 261 aaPredicted RBP6.32□□□□□ -1.4
VAPB-206ENST00000520497 CRISP2P16562 243 aa6.32□□□□□ -1.4
VAPB-206ENST00000520497 DEFB131AP59861 70 aa6.32□□□□□ -1.4
VAPB-206ENST00000520497 FABP9Q0Z7S8 132 aa6.32□□□□□ -1.4
VAPB-206ENST00000520497 FER1L6-AS1Q8NA97 138 aa6.32□□□□□ -1.4
VAPB-206ENST00000520497 PGLYRP4Q96LB8 373 aa6.32□□□□□ -1.4
VAPB-206ENST00000520497 MRPL18Q9H0U6 180 aaKnown RBP6.32□□□□□ -1.4
VAPB-206ENST00000520497 C19orf73Q9NVV2 129 aa6.32□□□□□ -1.4
VAPB-206ENST00000520497 MGAM2Q2M2H8 2515 aa6.32□□□□□ -1.4
VAPB-206ENST00000520497 SPINK4O60575 86 aa6.31□□□□□ -1.4
VAPB-206ENST00000520497 HLA-DRB4P13762 266 aa6.31□□□□□ -1.4
VAPB-206ENST00000520497 IGLL1P15814 213 aa6.31□□□□□ -1.4
VAPB-206ENST00000520497 FOXA3P55318 350 aaPredicted RBP6.31□□□□□ -1.4
VAPB-206ENST00000520497 LINC00322Q6ZN03 302 aaPredicted RBP6.31□□□□□ -1.4
VAPB-206ENST00000520497 SMIM15Q7Z3B0 74 aa6.31□□□□□ -1.4
VAPB-206ENST00000520497 APRG1Q8IVJ8 170 aa6.31□□□□□ -1.4
VAPB-206ENST00000520497 KCNS1Q96KK3 526 aa6.31□□□□□ -1.4
VAPB-206ENST00000520497 TPPP3Q9BW30 176 aa6.31□□□□□ -1.4
VAPB-206ENST00000520497 HLA-DRB4X5D2U9 266 aa6.31□□□□□ -1.4
VAPB-206ENST00000520497 MUC4Q99102 2169 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 TMSB15BA0A087X1C1 80 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 OR11H12B2RN74 326 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 H3BMM0 161 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST1H2BKO60814 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 APCSP02743 223 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 AMBPP02760 352 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST1H2BJP06899 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 CD7P09564 240 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 TRGC1P0CF51 173 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST1H2BOP23527 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST1H2BBP33778 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 CAMPP49913 170 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 CRIP1P50238 77 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 NDUFA6P56556 154 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST1H2BDP58876 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST1H2BCP62807 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 ZNF124Q15973 351 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST2H2BEQ16778 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.3□□□□□ -1.4
VAPB-206ENST00000520497 PRR31Q5SQ13 230 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 AMTNQ6UX39 209 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 ZFAND2AQ8N6M9 145 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST1H2BHQ93079 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 CLUHP3Q96NS8 147 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST1H2BNQ99877 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 HIST1H2BMQ99879 126 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 DNAH3Q8TD57 4116 aa6.3□□□□□ -1.4
VAPB-206ENST00000520497 C7orf71A4D174 169 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 KNCNA6PVL3 124 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 KLLNB2CW77 178 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 MED14OSP0DP75 135 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 S100A4P26447 101 aaKnown RBP6.29□□□□□ -1.4
VAPB-206ENST00000520497 S100A2P29034 98 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
VAPB-206ENST00000520497 CTRLP40313 264 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 ASIPP42127 132 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 CDKN1BP46527 198 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 ZNF80P51504 273 aaPredicted RBP6.29□□□□□ -1.4
VAPB-206ENST00000520497 CACNG7P62955 275 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 PRR9Q5T870 116 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 FAM159AQ6UWV7 190 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 TMEM136Q6ZRR5 245 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 GTSF1Q8WW33 167 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 NAGKQ9UJ70 344 aa6.29□□□□□ -1.4
VAPB-206ENST00000520497 A0A1B0GXF2 115 aa6.28□□□□□ -1.4
VAPB-206ENST00000520497 RBMY1BA6NDE4 496 aaKnown RBP6.28□□□□□ -1.4
VAPB-206ENST00000520497 RBMY1EA6NEQ0 496 aaKnown RBP6.28□□□□□ -1.4
VAPB-206ENST00000520497 J3KRW8 73 aa6.28□□□□□ -1.4
VAPB-206ENST00000520497 RBMY1DP0C7P1 496 aaKnown RBP6.28□□□□□ -1.4
VAPB-206ENST00000520497 GZMBP10144 247 aa6.28□□□□□ -1.4
VAPB-206ENST00000520497 DEFA6Q01524 100 aa6.28□□□□□ -1.4
VAPB-206ENST00000520497 TWIST1Q15672 202 aa6.28□□□□□ -1.4
VAPB-206ENST00000520497 LYZL1Q6UWQ5 148 aa6.28□□□□□ -1.4
VAPB-206ENST00000520497 TRPT1Q86TN4 253 aaKnown RBP6.28□□□□□ -1.4
VAPB-206ENST00000520497 WFDC10AQ9H1F0 79 aa6.28□□□□□ -1.4
VAPB-206ENST00000520497 NACAE9PAV3 2078 aa6.28□□□□□ -1.4
VAPB-206ENST00000520497 LOC105371267A0A1B0GV96 52 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 C5orf52A6NGY3 159 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 UBE2CO00762 179 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 ARMS2P0C7Q2 107 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 IGLC6P0CF74 106 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 NUTF2P61970 127 aaKnown RBP6.27□□□□□ -1.41
VAPB-206ENST00000520497 SNRPEP62304 92 aaKnown RBP6.27□□□□□ -1.41
VAPB-206ENST00000520497 EGFEM1PQ0D2K5 195 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 KIR3DS1Q14943 382 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 OR10J3Q5JRS4 329 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 GTSCR1Q86UQ5 136 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 BAGE3Q86Y29 109 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 STHQ8IWL8 128 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 C20orf144Q9BQM9 153 aa6.27□□□□□ -1.41
VAPB-206ENST00000520497 TRGV11A0A075B6L2 103 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 GRIFINA4D1Z8 144 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 M0R2Z0 102 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 CRXO43186 299 aaPredicted RBP6.26□□□□□ -1.41
VAPB-206ENST00000520497 INSP01308 110 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 IGKV3-20P01619 116 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 OR5AL1P0C617 328 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 AKR1D1P51857 326 aa6.26□□□□□ -1.41
VAPB-206ENST00000520497 SPINK13Q1W4C9 94 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms