RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 VPREB3Q9UKI3 123 aa19.42■□□□□ 0.7
COL13A1-213ENST00000520267 MRPS16Q9Y3D3 137 aaKnown RBP19.42■□□□□ 0.7
COL13A1-213ENST00000520267 IGHV4-4A0A075B6R2 117 aa19.42■□□□□ 0.7
COL13A1-213ENST00000520267 SPANXN1Q5VSR9 72 aa19.42■□□□□ 0.7
COL13A1-213ENST00000520267 TRAV21A0A0B4J279 112 aa19.41■□□□□ 0.7
COL13A1-213ENST00000520267 KIR3DS1Q14943 382 aa19.41■□□□□ 0.7
COL13A1-213ENST00000520267 Q6YL49 198 aa19.41■□□□□ 0.7
COL13A1-213ENST00000520267 HSBP1L1C9JCN9 74 aa19.41■□□□□ 0.7
COL13A1-213ENST00000520267 DEFB113Q30KQ7 82 aa19.41■□□□□ 0.7
COL13A1-213ENST00000520267 TMEM89A2RUT3 159 aa19.4■□□□□ 0.7
COL13A1-213ENST00000520267 CACNG7P62955 275 aa19.4■□□□□ 0.7
COL13A1-213ENST00000520267 UFC1Q9Y3C8 167 aa19.4■□□□□ 0.7
COL13A1-213ENST00000520267 CENPEQ02224 2701 aa19.39■□□□□ 0.7
COL13A1-213ENST00000520267 LINC01546A6NGU7 62 aa19.39■□□□□ 0.69
COL13A1-213ENST00000520267 RNASE4P34096 147 aaKnown RBP19.39■□□□□ 0.69
COL13A1-213ENST00000520267 Q5PR19 223 aa19.39■□□□□ 0.69
COL13A1-213ENST00000520267 SMIM15Q7Z3B0 74 aa19.39■□□□□ 0.69
COL13A1-213ENST00000520267 WFDC3Q8IUB2 231 aa19.39■□□□□ 0.69
COL13A1-213ENST00000520267 TFPI2P48307 235 aa19.39■□□□□ 0.69
COL13A1-213ENST00000520267 STPG4Q8N801 248 aa19.39■□□□□ 0.69
COL13A1-213ENST00000520267 DCANP1Q8TF63 244 aa19.39■□□□□ 0.69
COL13A1-213ENST00000520267 BEX4Q9NWD9 120 aaPredicted RBP19.39■□□□□ 0.69
COL13A1-213ENST00000520267 SPRY2O43597 315 aa19.38■□□□□ 0.69
COL13A1-213ENST00000520267 ANXA2RQ3ZCQ2 193 aa19.38■□□□□ 0.69
COL13A1-213ENST00000520267 TRAV26-2A0A0B4J265 109 aa19.37■□□□□ 0.69
COL13A1-213ENST00000520267 COL5A1-AS1Q5SY13 56 aa19.37■□□□□ 0.69
COL13A1-213ENST00000520267 APRG1Q8IVJ8 170 aa19.37■□□□□ 0.69
COL13A1-213ENST00000520267 OR2K2Q8NGT1 345 aa19.37■□□□□ 0.69
COL13A1-213ENST00000520267 ZNF702PQ9H963 129 aa19.37■□□□□ 0.69
COL13A1-213ENST00000520267 SCRT2Q9NQ03 307 aa19.37■□□□□ 0.69
COL13A1-213ENST00000520267 PTPN13Q12923 2485 aa19.37■□□□□ 0.69
COL13A1-213ENST00000520267 HINT1P49773 126 aaPredicted RBP19.37■□□□□ 0.69
COL13A1-213ENST00000520267 NXT2Q9NPJ8 142 aaKnown RBP19.37■□□□□ 0.69
COL13A1-213ENST00000520267 HOXA3O43365 443 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-213ENST00000520267 IFI27L1Q96BM0 104 aa19.36■□□□□ 0.69
COL13A1-213ENST00000520267 MS4A6AQ9H2W1 248 aa19.36■□□□□ 0.69
COL13A1-213ENST00000520267 NRACQ8N912 160 aa19.35■□□□□ 0.69
COL13A1-213ENST00000520267 EPG5Q9HCE0 2579 aa19.35■□□□□ 0.69
COL13A1-213ENST00000520267 G0S2P27469 103 aa19.35■□□□□ 0.69
COL13A1-213ENST00000520267 ID1P41134 155 aa19.35■□□□□ 0.69
COL13A1-213ENST00000520267 LEPP41159 167 aa19.35■□□□□ 0.69
COL13A1-213ENST00000520267 GOLT1BQ9Y3E0 138 aa19.35■□□□□ 0.69
COL13A1-213ENST00000520267 IGLV2-18A0A075B6J9 118 aa19.34■□□□□ 0.69
COL13A1-213ENST00000520267 TRBV7-9A0A0J9YWB2 115 aa19.34■□□□□ 0.69
COL13A1-213ENST00000520267 LGALS9BQ3B8N2 356 aa19.34■□□□□ 0.69
COL13A1-213ENST00000520267 LGALS9CQ6DKI2 356 aa19.34■□□□□ 0.69
COL13A1-213ENST00000520267 S100A4P26447 101 aaKnown RBP19.34■□□□□ 0.69
COL13A1-213ENST00000520267 ASIPP42127 132 aa19.34■□□□□ 0.69
COL13A1-213ENST00000520267 SLC25A34Q6PIV7 304 aa19.34■□□□□ 0.69
COL13A1-213ENST00000520267 LRRC75A-AS1Q8N1F1 130 aa19.34■□□□□ 0.69
COL13A1-213ENST00000520267 Q8N8P6 123 aa19.34■□□□□ 0.69
COL13A1-213ENST00000520267 DOPEY2Q9Y3R5 2298 aa19.33■□□□□ 0.69
COL13A1-213ENST00000520267 M0R381 172 aa19.33■□□□□ 0.68
COL13A1-213ENST00000520267 GNRH2O43555 120 aa19.33■□□□□ 0.68
COL13A1-213ENST00000520267 ZNF25P17030 456 aaPredicted RBP19.33■□□□□ 0.68
COL13A1-213ENST00000520267 FCER1GP30273 86 aa19.33■□□□□ 0.68
COL13A1-213ENST00000520267 Q96MF0 132 aa19.33■□□□□ 0.68
COL13A1-213ENST00000520267 PRRC2AP48634 2157 aaKnown RBP19.33■□□□□ 0.68
COL13A1-213ENST00000520267 LGALS1P09382 135 aaKnown RBP19.32■□□□□ 0.68
COL13A1-213ENST00000520267 MYOZ3Q8TDC0 251 aa19.32■□□□□ 0.68
COL13A1-213ENST00000520267 C18orf15Q96N68 181 aa19.32■□□□□ 0.68
COL13A1-213ENST00000520267 IGHV4OR15-8A0A075B7B6 117 aa19.31■□□□□ 0.68
COL13A1-213ENST00000520267 A0A087WW49 117 aa19.31■□□□□ 0.68
COL13A1-213ENST00000520267 ELANEP08246 267 aa19.31■□□□□ 0.68
COL13A1-213ENST00000520267 SYNJ2BPP57105 145 aa19.31■□□□□ 0.68
COL13A1-213ENST00000520267 WFDC12Q8WWY7 111 aa19.31■□□□□ 0.68
COL13A1-213ENST00000520267 PRSS47A8MTI9 375 aa19.3■□□□□ 0.68
COL13A1-213ENST00000520267 ABCA12Q86UK0 2595 aa19.3■□□□□ 0.68
COL13A1-213ENST00000520267 KLLNB2CW77 178 aa19.3■□□□□ 0.68
COL13A1-213ENST00000520267 SAMD13Q5VXD3 122 aa19.3■□□□□ 0.68
COL13A1-213ENST00000520267 PHLDA3Q9Y5J5 127 aa19.3■□□□□ 0.68
COL13A1-213ENST00000520267 ZNF688P0C7X2 276 aa19.29■□□□□ 0.68
COL13A1-213ENST00000520267 RNASE3P12724 160 aaKnown RBP19.29■□□□□ 0.68
COL13A1-213ENST00000520267 KRTAP1-3Q8IUG1 177 aa19.28■□□□□ 0.68
COL13A1-213ENST00000520267 TMEM158Q8WZ71 300 aa19.28■□□□□ 0.68
COL13A1-213ENST00000520267 DUX5Q96PT3 197 aa19.28■□□□□ 0.68
COL13A1-213ENST00000520267 MED14OSP0DP75 135 aa19.28■□□□□ 0.68
COL13A1-213ENST00000520267 MXRA5Q9NR99 2828 aa19.28■□□□□ 0.68
COL13A1-213ENST00000520267 ANKRD39Q53RE8 183 aa19.27■□□□□ 0.68
COL13A1-213ENST00000520267 PSMG4Q5JS54 123 aa19.27■□□□□ 0.68
COL13A1-213ENST00000520267 DEFB125Q8N687 156 aa19.27■□□□□ 0.68
COL13A1-213ENST00000520267 MRAP2Q96G30 205 aa19.27■□□□□ 0.68
COL13A1-213ENST00000520267 NAV2Q8IVL1 2488 aa19.27■□□□□ 0.68
COL13A1-213ENST00000520267 UBE2E2Q96LR5 201 aa19.27■□□□□ 0.68
COL13A1-213ENST00000520267 TMEM208Q9BTX3 173 aa19.27■□□□□ 0.68
COL13A1-213ENST00000520267 COX8AP10176 69 aa19.26■□□□□ 0.67
COL13A1-213ENST00000520267 DLEU1O43261 78 aa19.26■□□□□ 0.67
COL13A1-213ENST00000520267 HOXD3P31249 432 aaPredicted RBP19.26■□□□□ 0.67
COL13A1-213ENST00000520267 GAGE1Q13065 139 aa19.26■□□□□ 0.67
COL13A1-213ENST00000520267 C14orf178Q8N769 122 aaPredicted RBP19.26■□□□□ 0.67
COL13A1-213ENST00000520267 DKK2Q9UBU2 259 aa19.26■□□□□ 0.67
COL13A1-213ENST00000520267 LGALS9O00182 355 aa19.25■□□□□ 0.67
COL13A1-213ENST00000520267 CD5LO43866 347 aa19.25■□□□□ 0.67
COL13A1-213ENST00000520267 DPH3P1Q9H4G8 78 aa19.25■□□□□ 0.67
COL13A1-213ENST00000520267 K7EQG2 157 aa19.25■□□□□ 0.67
COL13A1-213ENST00000520267 MPV17L2Q567V2 206 aa19.25■□□□□ 0.67
COL13A1-213ENST00000520267 RNF152Q8N8N0 203 aa19.24■□□□□ 0.67
COL13A1-213ENST00000520267 TEX15Q9BXT5 2789 aa19.24■□□□□ 0.67
COL13A1-213ENST00000520267 MUC4Q99102 2169 aa19.24■□□□□ 0.67
COL13A1-213ENST00000520267 DPF1Q92782 380 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms