RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SVBPQ8N300 66 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 OR1S2Q8NGQ3 325 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 LYPD6BQ8NI32 183 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 PCNPQ8WW12 178 aaKnown RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 CIB3Q96Q77 187 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 NKX6-2Q9C056 277 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 ACTR3CQ9C0K3 210 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 Q9H3A6 140 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 SMDT1Q9H4I9 107 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 ENY2Q9NPA8 101 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 DOK5Q9P104 306 aa3.43□□□□□ -1.86
SDCBP-207ENST00000520168 F11RQ9Y624 299 aaKnown RBP3.43□□□□□ -1.86
SDCBP-207ENST00000520168 TRAV30A0A087WSZ9 112 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 MAP1LC3B2A6NCE7 125 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 FAM24AA6NFZ4 105 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 J3QR89 54 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 K7EQG2 157 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 PHOX2AO14813 284 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 SSSCA1O60232 199 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 OR7C2O60412 319 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 HPRT1P00492 218 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 IGKV1-39P01597 117 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 IGKV1-5P01602 117 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 IGKV1D-39P04432 117 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 P0C879 139 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 SMIM17P0DL12 118 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 HTN3P15516 51 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 AKR1C2P52895 323 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 EMP1P54849 157 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 PAX9P55771 341 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 ERVFC1-1P60608 527 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 DAD1P61803 113 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 SNRPD3P62318 126 aaKnown RBP3.42□□□□□ -1.86
SDCBP-207ENST00000520168 RHOBP62745 196 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 TAL2Q16559 108 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 TMEM241Q24JQ0 296 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 ACTL10Q5JWF8 245 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 C10orf91Q5T1B1 145 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 FAM222AQ5U5X8 452 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 IGFL4Q6B9Z1 124 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 SCGB1C1Q8TD33 95 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 DEFB104AQ8WTQ1 72 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 BAALCQ8WXS3 180 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 TMEM37Q8WXS4 190 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 LINC00052Q96N35 136 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 ATP5SQ99766 215 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 C20orf144Q9BQM9 153 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 PBDC1Q9BVG4 233 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 SMIM3Q9BZL3 60 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 MAP1LC3BQ9GZQ8 125 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 MAP1LC3AQ9H492 121 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 Q9H8V8 135 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 PSENENQ9NZ42 101 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 CACNG5Q9UF02 275 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 HSPB8Q9UJY1 196 aa3.42□□□□□ -1.86
SDCBP-207ENST00000520168 IGHV3-49A0A0A0MS15 119 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 K7EIM0 57 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 MPDU1O75352 247 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 CST7O76096 145 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 KRASP01116 189 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 HBE1P02100 147 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 ZNF688P0C7X2 276 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 PSG1P11464 419 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 NPPCP23582 126 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 ATP6V0CP27449 155 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 ERVK-16P61578 105 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 SNRPEP62304 92 aaKnown RBP3.41□□□□□ -1.86
SDCBP-207ENST00000520168 RPL30P62888 115 aaKnown RBP3.41□□□□□ -1.86
SDCBP-207ENST00000520168 SERF2P84101 59 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 CLINT1Q14677 625 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 FAM24BQ8N5W8 94 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 OR10G4Q8NGN3 311 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 OR5C1Q8NGR4 320 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 OR1L8Q8NGR8 309 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 OR2G3Q8NGZ4 309 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 DCANP1Q8TF63 244 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 UHRF2Q96PU4 802 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 PSMG3Q9BT73 122 aaPredicted RBP3.41□□□□□ -1.86
SDCBP-207ENST00000520168 UPK3BQ9BT76 320 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 SEC11CQ9BY50 192 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 CST9LQ9H4G1 147 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 UQCC1Q9NVA1 299 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 XCL2Q9UBD3 114 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 SS18L2Q9UHA2 77 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 CARHSP1Q9Y2V2 147 aaKnown RBP3.41□□□□□ -1.86
SDCBP-207ENST00000520168 LINC00588Q9Y4M8 146 aa3.41□□□□□ -1.86
SDCBP-207ENST00000520168 IGHV3OR16-13A0A075B7E8 117 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 IGHV3-74A0A0B4J1X5 117 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 TRAV1-1A0A0B4J248 108 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 A0A0G2JRQ6 117 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 KNCNA6PVL3 124 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 LYRM9A8MSI8 78 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 PRSS46E5RG02 174 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 UPK2O00526 184 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 HMGB3O15347 200 aaKnown RBP3.4□□□□□ -1.87
SDCBP-207ENST00000520168 GNG7O60262 68 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 TOMM40O96008 361 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 OXTP01178 125 aa3.4□□□□□ -1.87
SDCBP-207ENST00000520168 APOC3P02656 99 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms