RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 C10orf105Q8TEF2 133 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 TMEM263Q8WUH6 116 aaKnown RBP3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 FSCN3Q9NQT6 498 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 RPUSD1Q9UJJ7 312 aaKnown RBP3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 MYO7BQ6PIF6 2116 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGHV1-69DA0A0B4J2H0 117 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 A0A0J9YX75 114 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 TRBV10-3A0A0K0K1G6 114 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 PLAC8L1A1L4L8 177 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 SDHAF1A6NFY7 115 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 C17orf98A8MV24 154 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 TEX22C9J3V5 150 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 WNT9BO14905 357 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 GP9P14770 177 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 GATA1P15976 413 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 LGALS3P17931 250 aaKnown RBP3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 CD24P25063 80 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 GFERP55789 205 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 KRTAP10-9P60411 292 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 CFHR3Q02985 330 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 GUSBP11Q6P575 273 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 CEMP1Q6PRD7 247 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 Q86TA4 180 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 VKORC1L1Q8N0U8 176 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 FXYD5Q96DB9 178 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 SCGB3A1Q96QR1 104 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 EMC6Q9BV81 110 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 TTTY13Q9BZ97 58 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 DAZ1Q9NQZ3 744 aaKnown RBP3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 TMEM14BQ9NUH8 114 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 TMEM14CQ9P0S9 112 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 SLC25A15Q9Y619 301 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 MYO7AQ13402 2215 aa3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 TCF20Q9UGU0 1960 aaKnown RBP3.67□□□□□ -1.82
HMGB1P19-201ENST00000517578 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGHV1-58A0A0C4DH39 117 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 J3QT63 122 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 M0R3E3 92 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 LST1O00453 97 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 SCRG1O75711 98 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGHV4-39P01824 125 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 COX6B1P14854 86 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 PRCDQ00LT1 54 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 NNATQ16517 81 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 TMEM30BQ3MIR4 351 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 SFTA2Q6UW10 78 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 LYZL1Q6UWQ5 148 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 COX8CQ7Z4L0 72 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 TOMM6Q96B49 74 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 SLC50A1Q9BRV3 221 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 TIMM21Q9BVV7 248 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 Q9H3A6 140 aa3.66□□□□□ -1.82
HMGB1P19-201ENST00000517578 LRRK1Q38SD2 2015 aa3.65□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGLV3-32A0A0A0MS00 114 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 TMEM223A0PJW6 202 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 LILRA5A6NI73 299 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 C11orf86A6NJI1 115 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 LINC01548A6NM66 108 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 USP17L23D6RBM5 183 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 M0R1B8 84 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 NXPH4O95158 308 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 RNASE2P10153 161 aaKnown RBP3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 ZNF22P17026 224 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 CRIP2P52943 208 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 HILS1P60008 231 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 CFHR1Q03591 330 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 DAZ2Q13117 558 aaKnown RBP3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 ZNF826PQ6ZT77 177 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 PRNTQ86SH4 94 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 ZCCHC24Q8N2G6 241 aaKnown RBP3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 THAP8Q8NA92 274 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 DYNLRB2Q8TF09 96 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 DCANP1Q8TF63 244 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 TMEM141Q96I45 108 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 PRR25Q96S07 402 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 CNFNQ9BYD5 112 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 ICOSQ9Y6W8 199 aa3.65□□□□□ -1.83
HMGB1P19-201ENST00000517578 TRAV7A0A075B6U4 112 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 A0A087WWL8 130 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 IQCF6A8MYZ5 107 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 LMO7DNF2Z398 122 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 LEPROTO15243 131 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 NDUFS5O43920 106 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 PROP1O75360 226 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 DNAL4O96015 105 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 OXTP01178 125 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 IGKV3-11P04433 115 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 ZNF883P0CG24 379 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 HOXA4Q00056 320 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 FAM27E3Q08E93 113 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 PDE6HQ13956 83 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 RHOHQ15669 191 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 SPINK9Q5DT21 86 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 LINC00322Q6ZN03 302 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 LINC01561Q8N1V8 128 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 FAM216BQ8N7L0 139 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 WFDC11Q8NEX6 87 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 HES7Q9BYE0 225 aa3.64□□□□□ -1.83
HMGB1P19-201ENST00000517578 C16orf95Q9H693 158 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms