RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 FRMD6-AS1P0C7T7 363 aa10.16□□□□□ -0.78
ABCC3-216ENST00000515585 TDRG1Q3Y452 100 aa10.16□□□□□ -0.78
ABCC3-216ENST00000515585 GFI1BQ5VTD9 330 aa10.16□□□□□ -0.78
ABCC3-216ENST00000515585 TRPT1Q86TN4 253 aaKnown RBP10.16□□□□□ -0.78
ABCC3-216ENST00000515585 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
ABCC3-216ENST00000515585 MCRIP2Q9BUT9 160 aaKnown RBP10.16□□□□□ -0.78
ABCC3-216ENST00000515585 SSBP4Q9BWG4 385 aaPredicted RBP10.16□□□□□ -0.78
ABCC3-216ENST00000515585 CMYA5Q8N3K9 4069 aa10.16□□□□□ -0.78
ABCC3-216ENST00000515585 C7orf71A4D174 169 aa10.15□□□□□ -0.78
ABCC3-216ENST00000515585 OR11H12B2RN74 326 aa10.15□□□□□ -0.78
ABCC3-216ENST00000515585 TSPOP30536 169 aa10.15□□□□□ -0.78
ABCC3-216ENST00000515585 CDKN1BP46527 198 aa10.15□□□□□ -0.78
ABCC3-216ENST00000515585 COX19Q49B96 90 aa10.15□□□□□ -0.78
ABCC3-216ENST00000515585 ACTL10Q5JWF8 245 aa10.15□□□□□ -0.78
ABCC3-216ENST00000515585 XKRY2A2RUG3 117 aa10.14□□□□□ -0.79
ABCC3-216ENST00000515585 CD7P09564 240 aa10.14□□□□□ -0.79
ABCC3-216ENST00000515585 RPS10P46783 165 aaKnown RBP10.14□□□□□ -0.79
ABCC3-216ENST00000515585 TMEM136Q6ZRR5 245 aa10.14□□□□□ -0.79
ABCC3-216ENST00000515585 GNB1LQ9BYB4 327 aa10.14□□□□□ -0.79
ABCC3-216ENST00000515585 M0R2Z0 102 aa10.13□□□□□ -0.79
ABCC3-216ENST00000515585 SNAI2O43623 268 aa10.13□□□□□ -0.79
ABCC3-216ENST00000515585 ORM1P02763 201 aa10.13□□□□□ -0.79
ABCC3-216ENST00000515585 RBMY1A1P0DJD3 496 aaKnown RBP10.13□□□□□ -0.79
ABCC3-216ENST00000515585 RBMY1CP0DJD4 496 aa10.13□□□□□ -0.79
ABCC3-216ENST00000515585 MED14OSP0DP75 135 aa10.13□□□□□ -0.79
ABCC3-216ENST00000515585 RNASE4P34096 147 aaKnown RBP10.13□□□□□ -0.79
ABCC3-216ENST00000515585 RBMY1FQ15415 496 aaKnown RBP10.13□□□□□ -0.79
ABCC3-216ENST00000515585 SPINK13Q1W4C9 94 aa10.13□□□□□ -0.79
ABCC3-216ENST00000515585 NOTCH3Q9UM47 2321 aa10.13□□□□□ -0.79
ABCC3-216ENST00000515585 MUC4Q99102 2169 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 MT-ND6P03923 174 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 TRGC2P03986 189 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 OR5AL1P0C617 328 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 ANXA2RQ3ZCQ2 193 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 WDR73Q6P4I2 378 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 FER1L6-AS1Q8NA97 138 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 PGLYRP4Q96LB8 373 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 C20orf144Q9BQM9 153 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 LINC00467Q9BRT7 94 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 SCRT2Q9NQ03 307 aa10.12□□□□□ -0.79
ABCC3-216ENST00000515585 IGHV4-4A0A075B6R2 117 aa10.11□□□□□ -0.79
ABCC3-216ENST00000515585 TMSB15BA0A087X1C1 80 aa10.11□□□□□ -0.79
ABCC3-216ENST00000515585 A0A1B0GUT8 65 aa10.11□□□□□ -0.79
ABCC3-216ENST00000515585 IGKV3-20P01619 116 aa10.11□□□□□ -0.79
ABCC3-216ENST00000515585 AMBPP02760 352 aa10.11□□□□□ -0.79
ABCC3-216ENST00000515585 ARMS2P0C7Q2 107 aa10.11□□□□□ -0.79
ABCC3-216ENST00000515585 MRPL54Q6P161 138 aaKnown RBP10.11□□□□□ -0.79
ABCC3-216ENST00000515585 LYZL1Q6UWQ5 148 aa10.11□□□□□ -0.79
ABCC3-216ENST00000515585 TRAV12-2A0A075B6T6 113 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 A0A1B0GW15 77 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 GRIFINA4D1Z8 144 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 C1orf196B1AJZ1 125 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 F2Z2F3 143 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 J3KRW8 73 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 SPINK4O60575 86 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 GIG44P09565 113 aaPredicted RBP10.1□□□□□ -0.79
ABCC3-216ENST00000515585 HBBP68871 147 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 ZNF493Q6ZR52 646 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 FRZBQ92765 325 aa10.1□□□□□ -0.79
ABCC3-216ENST00000515585 NXPH4O95158 308 aa10.09□□□□□ -0.79
ABCC3-216ENST00000515585 HLA-DQA1P01909 254 aa10.09□□□□□ -0.79
ABCC3-216ENST00000515585 RNASE3P12724 160 aaKnown RBP10.09□□□□□ -0.79
ABCC3-216ENST00000515585 IGLL1P15814 213 aa10.09□□□□□ -0.79
ABCC3-216ENST00000515585 Q8N1Y9 231 aa10.09□□□□□ -0.79
ABCC3-216ENST00000515585 KCNS1Q96KK3 526 aa10.09□□□□□ -0.79
ABCC3-216ENST00000515585 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
ABCC3-216ENST00000515585 TMA7Q9Y2S6 64 aaKnown RBP10.09□□□□□ -0.79
ABCC3-216ENST00000515585 IGHV1OR15-1A0A075B7D0 117 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 SNURFLB1AK76 121 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST1H2BKO60814 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST1H2BJP06899 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST1H2BOP23527 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST1H2BBP33778 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST1H2BDP58876 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 RAB5BP61020 215 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST1H2BCP62807 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 RIGQ13278 110 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST2H2BEQ16778 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.08□□□□□ -0.8
ABCC3-216ENST00000515585 MUC21Q5SSG8 566 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 STHQ8IWL8 128 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST1H2BHQ93079 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST1H2BNQ99877 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 HIST1H2BMQ99879 126 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 TP53TG3Q9ULZ0 132 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 TRAPPC1Q9Y5R8 145 aa10.08□□□□□ -0.8
ABCC3-216ENST00000515585 GNRH2O43555 120 aa10.07□□□□□ -0.8
ABCC3-216ENST00000515585 TRGC1P0CF51 173 aa10.07□□□□□ -0.8
ABCC3-216ENST00000515585 EGFEM1PQ0D2K5 195 aa10.07□□□□□ -0.8
ABCC3-216ENST00000515585 FABP9Q0Z7S8 132 aa10.07□□□□□ -0.8
ABCC3-216ENST00000515585 C9orf85Q96MD7 179 aa10.07□□□□□ -0.8
ABCC3-216ENST00000515585 MRPL18Q9H0U6 180 aaKnown RBP10.07□□□□□ -0.8
ABCC3-216ENST00000515585 IGHV3-16A0A0C4DH30 117 aa10.06□□□□□ -0.8
ABCC3-216ENST00000515585 ASIPP42127 132 aa10.06□□□□□ -0.8
ABCC3-216ENST00000515585 FXYD7P58549 80 aa10.06□□□□□ -0.8
ABCC3-216ENST00000515585 SLAQ13239 276 aa10.06□□□□□ -0.8
ABCC3-216ENST00000515585 FAM159AQ6UWV7 190 aa10.06□□□□□ -0.8
ABCC3-216ENST00000515585 C1orf158Q8N1D5 194 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms