RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	LELP1	Q5T871	98 aa		10.44	□□□□□ -0.74
LMNA-223	ENST00000515459	SLC25A29	Q8N8R3	303 aa		10.44	□□□□□ -0.74
LMNA-223	ENST00000515459	SEC22C	Q9BRL7	303 aa		10.44	□□□□□ -0.74
LMNA-223	ENST00000515459	PRADC1	Q9BSG0	188 aa		10.44	□□□□□ -0.74
LMNA-223	ENST00000515459	KCNIP2	Q9NS61	270 aa		10.44	□□□□□ -0.74
LMNA-223	ENST00000515459	TRAV6	A0A075B6T7	132 aa		10.43	□□□□□ -0.74
LMNA-223	ENST00000515459	TCRB	P04435	133 aa		10.43	□□□□□ -0.74
LMNA-223	ENST00000515459	NHLH2	Q02577	135 aa		10.43	□□□□□ -0.74
LMNA-223	ENST00000515459	WFDC2	Q14508	124 aa		10.43	□□□□□ -0.74
LMNA-223	ENST00000515459	OR5C1	Q8NGR4	320 aa		10.43	□□□□□ -0.74
LMNA-223	ENST00000515459	TMED6	Q8WW62	240 aa		10.43	□□□□□ -0.74
LMNA-223	ENST00000515459	DNAH8	Q96JB1	4490 aa		10.43	□□□□□ -0.74
LMNA-223	ENST00000515459	TRAV21	A0A0B4J279	112 aa		10.42	□□□□□ -0.74
LMNA-223	ENST00000515459	TRBV6-4	A0A1B0GX49	114 aa		10.42	□□□□□ -0.74
LMNA-223	ENST00000515459	TYMS	P04818	313 aa		10.42	□□□□□ -0.74
LMNA-223	ENST00000515459	UBE2L3	P68036	154 aa	Known RBP	10.42	□□□□□ -0.74
LMNA-223	ENST00000515459	RHOH	Q15669	191 aa		10.42	□□□□□ -0.74
LMNA-223	ENST00000515459	ATP5S	Q99766	215 aa		10.42	□□□□□ -0.74
LMNA-223	ENST00000515459	SDF2L1	Q9HCN8	221 aa		10.42	□□□□□ -0.74
LMNA-223	ENST00000515459	PLA2G10	O15496	165 aa		10.41	□□□□□ -0.74
LMNA-223	ENST00000515459	LYRM1	O43325	122 aa		10.41	□□□□□ -0.74
LMNA-223	ENST00000515459	CIDEA	O60543	219 aa		10.41	□□□□□ -0.74
LMNA-223	ENST00000515459	KCNS1	Q96KK3	526 aa		10.41	□□□□□ -0.74
LMNA-223	ENST00000515459	HYLS1	Q96M11	299 aa		10.41	□□□□□ -0.74
LMNA-223	ENST00000515459	GTSF1L	Q9H1H1	148 aa		10.41	□□□□□ -0.74
LMNA-223	ENST00000515459	NUDT15	Q9NV35	164 aa		10.41	□□□□□ -0.74
LMNA-223	ENST00000515459	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.4	□□□□□ -0.74
LMNA-223	ENST00000515459	TRAV8-3	A0A0A6YYJ7	113 aa		10.4	□□□□□ -0.74
LMNA-223	ENST00000515459	LECT2	O14960	151 aa		10.4	□□□□□ -0.74
LMNA-223	ENST00000515459	ZNF876P	Q49A33	203 aa		10.4	□□□□□ -0.74
LMNA-223	ENST00000515459	CFAP126	Q5VTH2	177 aa		10.4	□□□□□ -0.74
LMNA-223	ENST00000515459	SCX	Q7RTU7	201 aa		10.4	□□□□□ -0.74
LMNA-223	ENST00000515459	ATP6V0E2	Q8NHE4	81 aa		10.4	□□□□□ -0.74
LMNA-223	ENST00000515459	WDR61	Q9GZS3	305 aa	Known RBP	10.4	□□□□□ -0.74
LMNA-223	ENST00000515459	C17orf112	F2Z3M2	114 aa		10.39	□□□□□ -0.75
LMNA-223	ENST00000515459	OXT	P01178	125 aa		10.39	□□□□□ -0.75
LMNA-223	ENST00000515459	KHDC3L	Q587J8	217 aa		10.39	□□□□□ -0.75
LMNA-223	ENST00000515459	CMTM2	Q8TAZ6	248 aa		10.39	□□□□□ -0.75
LMNA-223	ENST00000515459	ASB13	Q8WXK3	278 aa		10.39	□□□□□ -0.75
LMNA-223	ENST00000515459	RBM38	Q9H0Z9	239 aa	Known RBP	10.39	□□□□□ -0.75
LMNA-223	ENST00000515459	RPH3AL	Q9UNE2	315 aa		10.39	□□□□□ -0.75
LMNA-223	ENST00000515459		F6UZH7	168 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459	RS1	O15537	224 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459	LINC01620	Q4KN68	170 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459	FAM74A1	Q5RGS3	127 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459		Q8N3U1	123 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459	NMES1	Q9C002	83 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459	SH3BGRL3	Q9H299	93 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459	TREM1	Q9NP99	234 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459	OTOR	Q9NRC9	128 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459	PLA2G2D	Q9UNK4	145 aa		10.38	□□□□□ -0.75
LMNA-223	ENST00000515459	IGHV3-73	A0A0B4J1V6	119 aa		10.37	□□□□□ -0.75
LMNA-223	ENST00000515459	PGP	A6NDG6	321 aa		10.37	□□□□□ -0.75
LMNA-223	ENST00000515459	H2AFB2	P0C5Z0	115 aa		10.37	□□□□□ -0.75
LMNA-223	ENST00000515459	MGST1	P10620	155 aa	Known RBP	10.37	□□□□□ -0.75
LMNA-223	ENST00000515459	TAS2R45	P59539	299 aa		10.37	□□□□□ -0.75
LMNA-223	ENST00000515459	KRTAP10-4	P60372	401 aa	Predicted RBP	10.37	□□□□□ -0.75
LMNA-223	ENST00000515459	ASAH1	Q13510	395 aa		10.37	□□□□□ -0.75
LMNA-223	ENST00000515459	TOR2A	Q5JU69	321 aa		10.37	□□□□□ -0.75
LMNA-223	ENST00000515459	TVP23C	Q96ET8	276 aa		10.37	□□□□□ -0.75
LMNA-223	ENST00000515459	DPPA3	Q6W0C5	159 aa		10.36	□□□□□ -0.75
LMNA-223	ENST00000515459	GOLT1A	Q6ZVE7	132 aa		10.36	□□□□□ -0.75
LMNA-223	ENST00000515459	BAALC	Q8WXS3	180 aa		10.36	□□□□□ -0.75
LMNA-223	ENST00000515459	CHAC1	Q9BUX1	264 aa		10.36	□□□□□ -0.75
LMNA-223	ENST00000515459	COX11	Q9Y6N1	276 aa		10.36	□□□□□ -0.75
LMNA-223	ENST00000515459	TRAV8-1	A0A0A6YYK1	113 aa		10.35	□□□□□ -0.75
LMNA-223	ENST00000515459	RBFOX3	A6NFN3	312 aa		10.35	□□□□□ -0.75
LMNA-223	ENST00000515459	GGTLC3	B5MD39	225 aa		10.35	□□□□□ -0.75
LMNA-223	ENST00000515459	FFAR4	Q5NUL3	377 aa		10.35	□□□□□ -0.75
LMNA-223	ENST00000515459	DAZ4	Q86SG3	579 aa	Known RBP	10.35	□□□□□ -0.75
LMNA-223	ENST00000515459	ARL6IP6	Q8N6S5	226 aa		10.35	□□□□□ -0.75
LMNA-223	ENST00000515459	DAZ3	Q9NR90	486 aa	Known RBP	10.35	□□□□□ -0.75
LMNA-223	ENST00000515459	MBD2	Q9UBB5	411 aa		10.35	□□□□□ -0.75
LMNA-223	ENST00000515459		Q8N976	141 aa		10.34	□□□□□ -0.75
LMNA-223	ENST00000515459	OR5AC2	Q9NZP5	309 aa		10.34	□□□□□ -0.75
LMNA-223	ENST00000515459	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.33	□□□□□ -0.76
LMNA-223	ENST00000515459	LRRC37A5P	Q49AS3	106 aa		10.33	□□□□□ -0.76
LMNA-223	ENST00000515459	ZNF506	Q5JVG8	444 aa		10.33	□□□□□ -0.76
LMNA-223	ENST00000515459	CIRBP-AS1	Q8TBR5	109 aa		10.33	□□□□□ -0.76
LMNA-223	ENST00000515459	RMI2	Q96E14	147 aa		10.33	□□□□□ -0.76
LMNA-223	ENST00000515459	C9orf85	Q96MD7	179 aa		10.33	□□□□□ -0.76
LMNA-223	ENST00000515459	NDFIP1	Q9BT67	221 aa		10.33	□□□□□ -0.76
LMNA-223	ENST00000515459	LRP1	Q07954	4544 aa	Known RBP	10.33	□□□□□ -0.76
LMNA-223	ENST00000515459	PGPEP1L	A6NFU8	196 aa		10.32	□□□□□ -0.76
LMNA-223	ENST00000515459	EIF3G	O75821	320 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
LMNA-223	ENST00000515459	PTH2	Q96A98	100 aa		10.32	□□□□□ -0.76
LMNA-223	ENST00000515459		A0A087WWC5	75 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	RNF222	A6NCQ9	220 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	GAGE12J	A6NER3	117 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459		H0YIZ8	118 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	TAAR5	O14804	337 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	SIX6	O95475	246 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	LINC00694	P0DN24	101 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	GNG5	P63218	68 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	GAGE1	Q13065	139 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	GAGE4	Q13068	117 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	GAGE5	Q13069	117 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	GAGE13	Q4V321	117 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	PQLC2	Q6ZP29	291 aa		10.31	□□□□□ -0.76
LMNA-223	ENST00000515459	SGK494	Q96LW2	274 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms