RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 LINC01545Q5VT33 79 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 SMAD5-AS1Q9Y6J3 95 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 TRAV12-3A0A0B4J271 114 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 GAS8-AS1O95177 125 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 C1orf122Q6ZSJ8 110 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 TMEM8BA6NDV4 472 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 IGHV4-39P01824 125 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 SMIM13P0DJ93 91 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 SRSF1Q07955 248 aaKnown RBP eCLIP9.95□□□□□ -0.821e-7■□□□□ 8.1
SMG7-214ENST00000508461 PSMG4Q5JS54 123 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 C9orf139Q6ZV77 190 aa9.95□□□□□ -0.82
SMG7-214ENST00000508461 A0A087WWL8 130 aa9.94□□□□□ -0.82
SMG7-214ENST00000508461 CCDC140Q96MF4 163 aa9.94□□□□□ -0.82
SMG7-214ENST00000508461 SCRT2Q9NQ03 307 aa9.94□□□□□ -0.82
SMG7-214ENST00000508461 UNQ9165/PRO28630Q6UXU0 137 aa9.94□□□□□ -0.82
SMG7-214ENST00000508461 A0A0G2JLM5 398 aa9.94□□□□□ -0.82
SMG7-214ENST00000508461 Q6ZQT7 251 aa9.94□□□□□ -0.82
SMG7-214ENST00000508461 HSD52Q0P140 79 aa9.93□□□□□ -0.82
SMG7-214ENST00000508461 DPF1Q92782 380 aa9.93□□□□□ -0.82
SMG7-214ENST00000508461 CD5LO43866 347 aa9.93□□□□□ -0.82
SMG7-214ENST00000508461 IGF1P05019 195 aa9.93□□□□□ -0.82
SMG7-214ENST00000508461 TMEM170BQ5T4T1 132 aa9.93□□□□□ -0.82
SMG7-214ENST00000508461 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
SMG7-214ENST00000508461 SEC11AP67812 179 aa9.93□□□□□ -0.82
SMG7-214ENST00000508461 LGALS9BQ3B8N2 356 aa9.93□□□□□ -0.82
SMG7-214ENST00000508461 ANXA2RQ3ZCQ2 193 aa9.93□□□□□ -0.82
SMG7-214ENST00000508461 LGALS9CQ6DKI2 356 aa9.93□□□□□ -0.82
SMG7-214ENST00000508461 LOC107984156A0A0G2JMH3 177 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 GAGE12BA1L429 117 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 C11orf71Q6IPW1 123 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 ARL17AQ8IVW1 177 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 ARL6IP6Q8N6S5 226 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 COL12A1Q99715 3063 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 GNRH2O43555 120 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 LMO4P61968 165 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 CD300EQ496F6 205 aaPredicted RBP9.92□□□□□ -0.82
SMG7-214ENST00000508461 RNASE8Q8TDE3 154 aaKnown RBP9.92□□□□□ -0.82
SMG7-214ENST00000508461 IGHV3OR16-12A0A075B7B8 117 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 C5orf56Q8N8D9 126 aa9.92□□□□□ -0.82
SMG7-214ENST00000508461 F8W735 103 aaPredicted RBP9.91□□□□□ -0.82
SMG7-214ENST00000508461 TRAV12-2A0A075B6T6 113 aa9.91□□□□□ -0.82
SMG7-214ENST00000508461 H7C2G1 150 aa9.91□□□□□ -0.82
SMG7-214ENST00000508461 C11orf44Q8N8P7 122 aa9.91□□□□□ -0.82
SMG7-214ENST00000508461 ITLN2Q8WWU7 325 aaPredicted RBP9.91□□□□□ -0.82
SMG7-214ENST00000508461 KIR2DL4Q99706 377 aa9.91□□□□□ -0.82
SMG7-214ENST00000508461 IGKV3D-20A0A0C4DH25 116 aa9.91□□□□□ -0.82
SMG7-214ENST00000508461 SCGB1C2P0DMR2 95 aa9.91□□□□□ -0.82
SMG7-214ENST00000508461 OR9G4Q8NGQ1 327 aa9.91□□□□□ -0.82
SMG7-214ENST00000508461 IGHV4-30-2A0A087WSY4 118 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 K7ERJ3 54 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 OVOL1O14753 267 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 TAX1BP3O14907 124 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 SNRPD3P62318 126 aaKnown RBP9.9□□□□□ -0.82
SMG7-214ENST00000508461 OR1N2Q8NGR9 330 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 FAM223BA6NKX1 122 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 MRPS12O15235 138 aaKnown RBP9.9□□□□□ -0.82
SMG7-214ENST00000508461 FAM223AQ8IWN6 122 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 CHTOPQ9Y3Y2 248 aaKnown RBP9.9□□□□□ -0.82
SMG7-214ENST00000508461 IGHV3-73A0A0B4J1V6 119 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 APOMO95445 188 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 RIPPLY3P57055 190 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 MTURNQ8N3F0 131 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 DEFB125Q8N687 156 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 CHAC1Q9BUX1 264 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 CSTL1Q9H114 145 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 CYSLTR1Q9Y271 337 aa9.9□□□□□ -0.82
SMG7-214ENST00000508461 Q1RN00 199 aa9.9□□□□□ -0.83
SMG7-214ENST00000508461 RPL39LQ96EH5 51 aaKnown RBP9.9□□□□□ -0.83
SMG7-214ENST00000508461 LINC00477Q96M19 166 aa9.9□□□□□ -0.83
SMG7-214ENST00000508461 IGHV3-64A0A075B6Q5 118 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 MSMBP08118 114 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 Q8N8P6 123 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 DPH3P1Q9H4G8 78 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 K7EP13 123 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 PAX2Q02962 417 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 DAZ1Q9NQZ3 744 aaKnown RBP9.89□□□□□ -0.83
SMG7-214ENST00000508461 TRBV6-1A0A0K0K1D8 114 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 SYNJ2BPP57105 145 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 HERVK_113P61574 105 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 SAMD5Q5TGI4 173 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 MEGF9Q9H1U4 602 aa9.89□□□□□ -0.83
SMG7-214ENST00000508461 CST9LQ9H4G1 147 aa9.88□□□□□ -0.83
SMG7-214ENST00000508461 ZFAND3Q9H8U3 227 aa9.88□□□□□ -0.83
SMG7-214ENST00000508461 SUMO2P61956 95 aaKnown RBP9.88□□□□□ -0.83
SMG7-214ENST00000508461 COTL1Q14019 142 aa9.88□□□□□ -0.83
SMG7-214ENST00000508461 ZNF462Q96JM2 2506 aa9.88□□□□□ -0.83
SMG7-214ENST00000508461 ORMDL2Q53FV1 153 aa9.88□□□□□ -0.83
SMG7-214ENST00000508461 TMEM190Q8WZ59 177 aa9.88□□□□□ -0.83
SMG7-214ENST00000508461 KLK9Q9UKQ9 250 aa9.88□□□□□ -0.83
SMG7-214ENST00000508461 MTORP42345 2549 aa9.88□□□□□ -0.83
SMG7-214ENST00000508461 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
SMG7-214ENST00000508461 DYNLRB2Q8TF09 96 aa9.87□□□□□ -0.83
SMG7-214ENST00000508461 ZNF48Q96MX3 618 aaPredicted RBP9.87□□□□□ -0.83
SMG7-214ENST00000508461 C11orf21Q9P2W6 132 aa9.87□□□□□ -0.83
SMG7-214ENST00000508461 CRXO43186 299 aaPredicted RBP9.87□□□□□ -0.83
SMG7-214ENST00000508461 IGLC6P0CF74 106 aa9.87□□□□□ -0.83
SMG7-214ENST00000508461 SPINK13Q1W4C9 94 aa9.87□□□□□ -0.83
SMG7-214ENST00000508461 Q8N6K4 173 aa9.87□□□□□ -0.83
SMG7-214ENST00000508461 B4DSR2 109 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms