RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 NPYP01303 97 aa13.25□□□□□ -0.29
SFXN1-208ENST00000507823 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
SFXN1-208ENST00000507823 SSTP61278 116 aa13.25□□□□□ -0.29
SFXN1-208ENST00000507823 KRTAP1-1Q07627 177 aa13.25□□□□□ -0.29
SFXN1-208ENST00000507823 HIST2H2BCQ6DN03 193 aa13.25□□□□□ -0.29
SFXN1-208ENST00000507823 IGKV3-7A0A075B6H7 116 aa13.25□□□□□ -0.29
SFXN1-208ENST00000507823 A0A096LNJ9 63 aa13.25□□□□□ -0.29
SFXN1-208ENST00000507823 DEFB125Q8N687 156 aa13.25□□□□□ -0.29
SFXN1-208ENST00000507823 SCRT2Q9NQ03 307 aa13.25□□□□□ -0.29
SFXN1-208ENST00000507823 TCF21O43680 179 aa13.24□□□□□ -0.29
SFXN1-208ENST00000507823 SRD5A1P18405 259 aa13.24□□□□□ -0.29
SFXN1-208ENST00000507823 KLHDC1Q8N7A1 406 aa13.24□□□□□ -0.29
SFXN1-208ENST00000507823 FOXC2Q99958 501 aa13.24□□□□□ -0.29
SFXN1-208ENST00000507823 LBHQ53QV2 105 aaPredicted RBP13.24□□□□□ -0.29
SFXN1-208ENST00000507823 PET117Q6UWS5 81 aa13.24□□□□□ -0.29
SFXN1-208ENST00000507823 C20orf202A1L168 122 aa13.23□□□□□ -0.29
SFXN1-208ENST00000507823 MRPL52Q86TS9 123 aaKnown RBP13.23□□□□□ -0.29
SFXN1-208ENST00000507823 PRSS47A8MTI9 375 aa13.23□□□□□ -0.29
SFXN1-208ENST00000507823 SPATA45Q537H7 98 aa13.23□□□□□ -0.29
SFXN1-208ENST00000507823 ZNF747Q9BV97 191 aa13.23□□□□□ -0.29
SFXN1-208ENST00000507823 SMKR1H3BMG3 65 aa13.22□□□□□ -0.29
SFXN1-208ENST00000507823 ADAMTSL5Q6ZMM2 481 aa13.22□□□□□ -0.29
SFXN1-208ENST00000507823 C4orf3Q8WVX3 66 aa13.22□□□□□ -0.29
SFXN1-208ENST00000507823 PDZD2O15018 2839 aa13.22□□□□□ -0.29
SFXN1-208ENST00000507823 TRAV9-2A0A087WT02 112 aa13.22□□□□□ -0.29
SFXN1-208ENST00000507823 ANXA2RQ3ZCQ2 193 aa13.22□□□□□ -0.29
SFXN1-208ENST00000507823 TCTEX1D4Q5JR98 221 aa13.22□□□□□ -0.29
SFXN1-208ENST00000507823 WFDC12Q8WWY7 111 aa13.22□□□□□ -0.29
SFXN1-208ENST00000507823 MAP1LC3CQ9BXW4 147 aa13.22□□□□□ -0.29
SFXN1-208ENST00000507823 H3BVH4 76 aa13.21□□□□□ -0.29
SFXN1-208ENST00000507823 RNASE4P34096 147 aaKnown RBP13.21□□□□□ -0.29
SFXN1-208ENST00000507823 DUX5Q96PT3 197 aa13.21□□□□□ -0.29
SFXN1-208ENST00000507823 A0A0J9YX75 114 aa13.21□□□□□ -0.3
SFXN1-208ENST00000507823 CD5LO43866 347 aa13.21□□□□□ -0.3
SFXN1-208ENST00000507823 NCR2O95944 276 aa13.21□□□□□ -0.3
SFXN1-208ENST00000507823 EVI2AP22794 236 aa13.21□□□□□ -0.3
SFXN1-208ENST00000507823 SNRPD3P62318 126 aaKnown RBP13.21□□□□□ -0.3
SFXN1-208ENST00000507823 SMIM15Q7Z3B0 74 aa13.21□□□□□ -0.3
SFXN1-208ENST00000507823 ASIPP42127 132 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 KIR3DS1Q14943 382 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 Q6ZSV7 163 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 MAP1LC3AQ9H492 121 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 SELENOKQ9Y6D0 94 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 LOC389332A0A1B0GUA5 103 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 DNAJC9-AS1A6NH13 148 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 NXPH4O95158 308 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 TNFRSF6BO95407 300 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 IGLC3P0DOY3 106 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 SPANXN1Q5VSR9 72 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 WFDC3Q8IUB2 231 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 C2orf88Q9BSF0 95 aa13.2□□□□□ -0.3
SFXN1-208ENST00000507823 LINC01619G3V211 115 aa13.19□□□□□ -0.3
SFXN1-208ENST00000507823 GAS8-AS1O95177 125 aa13.19□□□□□ -0.3
SFXN1-208ENST00000507823 LINC01545Q5VT33 79 aa13.19□□□□□ -0.3
SFXN1-208ENST00000507823 C18orf65Q6ZTR6 163 aa13.19□□□□□ -0.3
SFXN1-208ENST00000507823 TRAV2A0A0B4J234 112 aa13.19□□□□□ -0.3
SFXN1-208ENST00000507823 LEPP41159 167 aa13.19□□□□□ -0.3
SFXN1-208ENST00000507823 NXT2Q9NPJ8 142 aaKnown RBP13.19□□□□□ -0.3
SFXN1-208ENST00000507823 J3KRW8 73 aa13.18□□□□□ -0.3
SFXN1-208ENST00000507823 ZNF688P0C7X2 276 aa13.18□□□□□ -0.3
SFXN1-208ENST00000507823 RNASE3P12724 160 aaKnown RBP13.18□□□□□ -0.3
SFXN1-208ENST00000507823 PSMG4Q5JS54 123 aa13.18□□□□□ -0.3
SFXN1-208ENST00000507823 NRACQ8N912 160 aa13.18□□□□□ -0.3
SFXN1-208ENST00000507823 IGLV2-18A0A075B6J9 118 aa13.18□□□□□ -0.3
SFXN1-208ENST00000507823 HBDP02042 147 aa13.18□□□□□ -0.3
SFXN1-208ENST00000507823 ANK3Q12955 4377 aaKnown RBP13.18□□□□□ -0.3
SFXN1-208ENST00000507823 OR4C46A6NHA9 309 aa13.17□□□□□ -0.3
SFXN1-208ENST00000507823 MRAP2Q96G30 205 aa13.17□□□□□ -0.3
SFXN1-208ENST00000507823 SLURP1P55000 103 aa13.17□□□□□ -0.3
SFXN1-208ENST00000507823 ATOH7Q8N100 152 aa13.17□□□□□ -0.3
SFXN1-208ENST00000507823 OR2K2Q8NGT1 345 aa13.17□□□□□ -0.3
SFXN1-208ENST00000507823 UQCR10Q9UDW1 63 aa13.17□□□□□ -0.3
SFXN1-208ENST00000507823 ZNF705AQ6ZN79 300 aaPredicted RBP13.16□□□□□ -0.3
SFXN1-208ENST00000507823 AKAP9Q99996 3911 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 C7orf71A4D174 169 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 A8MTW9 85 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 MAJINQ3KP22 176 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 FOXI2Q6ZQN5 318 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 LURAP1LQ8IV03 231 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 POM121L12Q8N7R1 296 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 Q8N8P6 123 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 SNHG12Q9BXW3 62 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 ESM1Q9NQ30 184 aa13.16□□□□□ -0.3
SFXN1-208ENST00000507823 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
SFXN1-208ENST00000507823 IGLL1P15814 213 aa13.15□□□□□ -0.3
SFXN1-208ENST00000507823 TFPI2P48307 235 aa13.15□□□□□ -0.3
SFXN1-208ENST00000507823 PEMTQ9UBM1 199 aa13.15□□□□□ -0.3
SFXN1-208ENST00000507823 GNRH2O43555 120 aa13.15□□□□□ -0.3
SFXN1-208ENST00000507823 GATA1P15976 413 aaPredicted RBP13.15□□□□□ -0.3
SFXN1-208ENST00000507823 S100A4P26447 101 aaKnown RBP13.15□□□□□ -0.3
SFXN1-208ENST00000507823 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
SFXN1-208ENST00000507823 OR11H1Q8NG94 326 aa13.15□□□□□ -0.3
SFXN1-208ENST00000507823 OR1N2Q8NGR9 330 aa13.15□□□□□ -0.3
SFXN1-208ENST00000507823 FLNAP21333 2647 aaKnown RBP13.15□□□□□ -0.3
SFXN1-208ENST00000507823 TLN2Q9Y4G6 2542 aa13.15□□□□□ -0.3
SFXN1-208ENST00000507823 EREGO14944 169 aa13.14□□□□□ -0.31
SFXN1-208ENST00000507823 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
SFXN1-208ENST00000507823 M0R143 59 aa13.14□□□□□ -0.31
SFXN1-208ENST00000507823 ST20Q9HBF5 79 aa13.14□□□□□ -0.31
SFXN1-208ENST00000507823 PHLDA3Q9Y5J5 127 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms