RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 HTR1DP28221 377 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 HRH1P35367 487 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 PPP1CCP36873 323 aaKnown RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 UBE2MP61081 183 aaKnown RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 KIAA0087Q14695 138 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 CAMK2N1Q7Z7J9 78 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 TOMM5Q8N4H5 51 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF645Q8N7E2 425 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 OR5A1Q8NGJ0 315 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 OR2G3Q8NGZ4 309 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 PIFOQ8TCI5 191 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 BLNKQ8WV28 456 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 RTN4IP1Q8WWV3 396 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 FRZBQ92765 325 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 FAM104AQ969W3 186 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 SMR3AQ99954 134 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 SLC25A21Q9BQT8 299 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 ANAPC13Q9BS18 74 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 NDFIP1Q9BT67 221 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 NAT8BQ9UHF3 227 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 FUT9Q9Y231 359 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 AMMECR1Q9Y4X0 333 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 MAP1LC3B2A6NCE7 125 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 RBMY1BA6NDE4 496 aaKnown RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 RBMY1EA6NEQ0 496 aaKnown RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 B4DEV8 164 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 NDUFB6O95139 128 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 NDUFA3O95167 84 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 PRB2P02812 416 aaPredicted RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 TRGC2P03986 189 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 GAPDHP04406 335 aaKnown RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 RBMY1DP0C7P1 496 aaKnown RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 RBMY1A1P0DJD3 496 aaKnown RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 NPY1RP25929 384 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 FAUP35544 74 aaKnown RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 SUB1P53999 127 aaKnown RBP eCLIP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 MEF2BQ02080 365 aaPredicted RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 KLRD1Q13241 179 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 ELOBQ15370 118 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 MMDQ15546 238 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 ACOT6Q3I5F7 207 aaPredicted RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 TMEM97Q5BJF2 176 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 FAM162BQ5T6X4 162 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 ZFAND6Q6FIF0 208 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 FOXI2Q6ZQN5 318 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 C19orf35Q6ZS72 473 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 DYNAPQ8N1N2 210 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 DRAM1Q8N682 238 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 ZDHHC22Q8N966 263 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 INO80EQ8NBZ0 244 aaPredicted RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 OR5H2Q8NGV7 314 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 LYPD6BQ8NI32 183 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 Q8WTZ3 238 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 FLYWCH2Q96CP2 140 aaKnown RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 ADTRPQ96IZ2 230 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 HSD17B10Q99714 261 aaKnown RBP3.59□□□□□ -1.83
NIPBL-205ENST00000505998 RNF5Q99942 180 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 NABP2Q9BQ15 211 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 SMIM3Q9BZL3 60 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 MAP1LC3BQ9GZQ8 125 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 PARP11Q9NR21 331 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 CCL28Q9NRJ3 127 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 WSB1Q9Y6I7 421 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 V9GYY9 64 aa3.59□□□□□ -1.83
NIPBL-205ENST00000505998 TRBV24-1A0A075B6N3 115 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 IGHV3-43A0A0B4J1X8 118 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 IGHV1-3A0A0C4DH29 117 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 A0A1B0GW64 132 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 A0A1W2PRE2 83 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 IGLC7A0M8Q6 106 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 MEIS3P1A6NDR6 274 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 A6NDX4 124 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 UMAD1C9J7I0 102 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 H0YJW9 148 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 H3BQ15 152 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 PEX7O00628 323 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 CT45A6P0DMU7 189 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 CT45A5P0DMU8 189 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 CT45A7P0DMV0 189 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 IGHV3-43DP0DP04 118 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 IL3RAP26951 378 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 SULT1A2P50226 295 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 RND2P52198 227 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 TAS2R31P59538 309 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 SUPT4H1P63272 117 aaKnown RBP3.58□□□□□ -1.84
NIPBL-205ENST00000505998 DIAPH2-AS1Q14236 149 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 LRRC75BQ2VPJ9 315 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 KLK9Q2XQG4 91 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 ZNF818PQ6ZRF7 136 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 PDPNQ86YL7 162 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 Q8N2B8 174 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 Q8N9W7 124 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 NPBQ8NG41 125 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 UBALD1Q8TB05 177 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 SRSF12Q8WXF0 261 aaKnown RBP3.58□□□□□ -1.84
NIPBL-205ENST00000505998 TMEM230Q96A57 120 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 HSPB9Q9BQS6 159 aa3.58□□□□□ -1.84
NIPBL-205ENST00000505998 RTBDNQ9BSG5 229 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms