RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 B9D2Q9BPU9 175 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SLC25A21Q9BQT8 299 aaPredicted RBP2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TM2D3Q9BRN9 247 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SMIM3Q9BZL3 60 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TUBA4BQ9H853 241 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF230Q9UIE0 474 aaPredicted RBP2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 GNG8Q9UK08 70 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 R4GMQ9 66 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ABCA1O95477 2261 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TRAV1-2A0A0B4J238 106 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TRAV41A0A0B4J266 112 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 J3QR89 54 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 M0R135 149 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 BCL2L11O43521 198 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 DPM2O94777 84 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 GYPBP06028 91 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR5AC1P0C628 307 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 INAFM2P0DMQ5 153 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF25P17030 456 aaPredicted RBP2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 S100A4P26447 101 aaKnown RBP2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TAS2R30P59541 319 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NCS1P62166 190 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CDK5R1Q15078 307 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RRN3P1Q2M238 152 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 C15orf32Q32M92 178 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 BCL2L15Q5TBC7 163 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RASL11AQ6T310 242 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LCA10Q71F78 164 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR4C16Q8NGL9 310 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PP6455Q8WZ26 134 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SLAMF6Q96DU3 332 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 BORCS8Q96FH0 119 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF799Q96GE5 643 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF471Q9BX82 626 aaPredicted RBP2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ERG28Q9UKR5 140 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LSM2Q9Y333 95 aaKnown RBP2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 KLK5Q9Y337 293 aaPredicted RBP2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PHLDA3Q9Y5J5 127 aa2.84□□□□□ -1.95
PDLIM1P4-201ENST00000504327 VPS13CQ709C8 3753 aa2.84□□□□□ -1.96
PDLIM1P4-201ENST00000504327 MXRA5Q9NR99 2828 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 ZNF469Q96JG9 3925 aaPredicted RBP2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 IGHV1-18A0A0C4DH31 117 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 PNMA8CA0A1B0GUJ8 204 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 FAM168BA1KXE4 195 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 E7EQL1 145 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 M0R129 80 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 RER1O15258 196 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 NRASP01111 189 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 HRASP01112 189 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 KRASP01116 189 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 IGKV3-15P01624 115 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TRGC2P03986 189 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 PRM2P04554 102 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 CD28P10747 220 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 NFYBP25208 207 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 CSN1S1P47710 185 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 RPL30P62888 115 aaKnown RBP2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 PPP3R1P63098 170 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 MRPS10P82664 201 aaKnown RBP2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 SYCNQ0VAF6 134 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 SP6Q3SY56 376 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 HSD17B12Q53GQ0 312 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 RNASE10Q5GAN6 216 aaKnown RBP2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 PABPC1L2AQ5JQF8 200 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 PRR15Q8IV56 129 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 C10orf126Q8N4M7 172 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 DAND5Q8N907 189 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TYMSOSQ8TAI1 123 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 CIRBP-AS1Q8TBR5 109 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 RPS4Y2Q8TD47 263 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 SLC25A46Q96AG3 418 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TP53RKQ96S44 253 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 NAT8BQ9UHF3 227 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 ZNF222Q9UK12 451 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 FUT9Q9Y231 359 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 LHFPL6Q9Y693 200 aa2.83□□□□□ -1.96
PDLIM1P4-201ENST00000504327 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 HIVEP2P31629 2446 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 CHD3Q12873 2000 aaKnown RBP2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 C9orf170A2RU37 121 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 GABARAPH6UMI1 98 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 H7BYZ3 331 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TAX1BP3O14907 124 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 ZNF73O43830 326 aaPredicted RBP2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 ZNF324O75467 553 aaPredicted RBP2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 CYB5AP00167 134 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 IGKV1-5P01602 117 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 IGHV1-46P01743 117 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 ZNF14P17017 642 aaPredicted RBP2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 NPPCP23582 126 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 NDUFA6P56556 154 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 SLC38A11Q08AI6 406 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TAF9Q16594 264 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 DNLZQ5SXM8 178 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 AADACL3Q5VUY0 350 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 HAGHLQ6PII5 290 aaPredicted RBP2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 Q6ZR54 194 aa2.82□□□□□ -1.96
PDLIM1P4-201ENST00000504327 S100ZQ8WXG8 99 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms