RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 IGLL1P15814 213 aa16.93■□□□□ 0.3
PCDH1-204ENST00000503492 PET117Q6UWS5 81 aa16.93■□□□□ 0.3
PCDH1-204ENST00000503492 MCRIP2Q9BUT9 160 aaKnown RBP16.93■□□□□ 0.3
PCDH1-204ENST00000503492 IGHV4-4A0A075B6R2 117 aa16.92■□□□□ 0.3
PCDH1-204ENST00000503492 IGHV4OR15-8A0A075B7B6 117 aa16.92■□□□□ 0.3
PCDH1-204ENST00000503492 A0A087WW49 117 aa16.92■□□□□ 0.3
PCDH1-204ENST00000503492 APRG1Q8IVJ8 170 aa16.92■□□□□ 0.3
PCDH1-204ENST00000503492 UQCR10Q9UDW1 63 aa16.92■□□□□ 0.3
PCDH1-204ENST00000503492 C20orf202A1L168 122 aa16.92■□□□□ 0.3
PCDH1-204ENST00000503492 ID1P41134 155 aa16.92■□□□□ 0.3
PCDH1-204ENST00000503492 HIST2H2BCQ6DN03 193 aa16.92■□□□□ 0.3
PCDH1-204ENST00000503492 H0Y8G0 127 aa16.91■□□□□ 0.3
PCDH1-204ENST00000503492 RNASE4P34096 147 aaKnown RBP16.91■□□□□ 0.3
PCDH1-204ENST00000503492 SYNJ2BPP57105 145 aa16.91■□□□□ 0.3
PCDH1-204ENST00000503492 UBE2E2Q96LR5 201 aa16.91■□□□□ 0.3
PCDH1-204ENST00000503492 GATA1P15976 413 aaPredicted RBP16.91■□□□□ 0.3
PCDH1-204ENST00000503492 FXYD7P58549 80 aa16.91■□□□□ 0.3
PCDH1-204ENST00000503492 SPANXN1Q5VSR9 72 aa16.91■□□□□ 0.3
PCDH1-204ENST00000503492 RNF152Q8N8N0 203 aa16.91■□□□□ 0.3
PCDH1-204ENST00000503492 MS4A6AQ9H2W1 248 aa16.91■□□□□ 0.3
PCDH1-204ENST00000503492 TRBV7-9A0A0J9YWB2 115 aa16.9■□□□□ 0.3
PCDH1-204ENST00000503492 CACNG7P62955 275 aa16.9■□□□□ 0.3
PCDH1-204ENST00000503492 APCP25054 2843 aa16.9■□□□□ 0.3
PCDH1-204ENST00000503492 TNFRSF6BO95407 300 aa16.89■□□□□ 0.3
PCDH1-204ENST00000503492 ANXA2RQ3ZCQ2 193 aa16.89■□□□□ 0.3
PCDH1-204ENST00000503492 SAMD13Q5VXD3 122 aa16.89■□□□□ 0.3
PCDH1-204ENST00000503492 WFDC11Q8NEX6 87 aa16.89■□□□□ 0.3
PCDH1-204ENST00000503492 MAP1LC3AQ9H492 121 aa16.89■□□□□ 0.3
PCDH1-204ENST00000503492 LAMTOR2Q9Y2Q5 125 aa16.89■□□□□ 0.3
PCDH1-204ENST00000503492 TFPI2P48307 235 aa16.89■□□□□ 0.29
PCDH1-204ENST00000503492 TEX15Q9BXT5 2789 aa16.89■□□□□ 0.29
PCDH1-204ENST00000503492 MXRA5Q9NR99 2828 aa16.89■□□□□ 0.29
PCDH1-204ENST00000503492 MRPL52Q86TS9 123 aaKnown RBP16.88■□□□□ 0.29
PCDH1-204ENST00000503492 Q8N2B8 174 aa16.88■□□□□ 0.29
PCDH1-204ENST00000503492 LGALS9O00182 355 aa16.88■□□□□ 0.29
PCDH1-204ENST00000503492 HOXD3P31249 432 aaPredicted RBP16.88■□□□□ 0.29
PCDH1-204ENST00000503492 LINC01545Q5VT33 79 aa16.88■□□□□ 0.29
PCDH1-204ENST00000503492 SMIM15Q7Z3B0 74 aa16.88■□□□□ 0.29
PCDH1-204ENST00000503492 SPRY2O43597 315 aa16.87■□□□□ 0.29
PCDH1-204ENST00000503492 Q6ZN92 141 aa16.87■□□□□ 0.29
PCDH1-204ENST00000503492 PMCHL2Q9BQD1 86 aa16.87■□□□□ 0.29
PCDH1-204ENST00000503492 hDV102S1A0JD36 115 aa16.87■□□□□ 0.29
PCDH1-204ENST00000503492 HBDP02042 147 aa16.86■□□□□ 0.29
PCDH1-204ENST00000503492 ZNF688P0C7X2 276 aa16.86■□□□□ 0.29
PCDH1-204ENST00000503492 ASIPP42127 132 aa16.86■□□□□ 0.29
PCDH1-204ENST00000503492 C18orf65Q6ZTR6 163 aa16.86■□□□□ 0.29
PCDH1-204ENST00000503492 LINC01546A6NGU7 62 aa16.85■□□□□ 0.29
PCDH1-204ENST00000503492 KLLNB2CW77 178 aa16.85■□□□□ 0.29
PCDH1-204ENST00000503492 TRAV26-2A0A0B4J265 109 aa16.85■□□□□ 0.29
PCDH1-204ENST00000503492 GNRH2O43555 120 aa16.85■□□□□ 0.29
PCDH1-204ENST00000503492 S100A4P26447 101 aaKnown RBP16.85■□□□□ 0.29
PCDH1-204ENST00000503492 PSMG4Q5JS54 123 aa16.85■□□□□ 0.29
PCDH1-204ENST00000503492 WFDC12Q8WWY7 111 aa16.85■□□□□ 0.29
PCDH1-204ENST00000503492 NBPF19A0A087WUL8 3843 aa16.84■□□□□ 0.29
PCDH1-204ENST00000503492 ZNF469Q96JG9 3925 aaPredicted RBP16.84■□□□□ 0.29
PCDH1-204ENST00000503492 K7EQG2 157 aa16.84■□□□□ 0.29
PCDH1-204ENST00000503492 HNRNPA3P51991 378 aaKnown RBP16.84■□□□□ 0.29
PCDH1-204ENST00000503492 OR2K2Q8NGT1 345 aa16.84■□□□□ 0.29
PCDH1-204ENST00000503492 NXT2Q9NPJ8 142 aaKnown RBP16.84■□□□□ 0.29
PCDH1-204ENST00000503492 M0R381 172 aa16.83■□□□□ 0.28
PCDH1-204ENST00000503492 NRACQ8N912 160 aa16.83■□□□□ 0.28
PCDH1-204ENST00000503492 ST20Q9HBF5 79 aa16.82■□□□□ 0.28
PCDH1-204ENST00000503492 SCRT2Q9NQ03 307 aa16.82■□□□□ 0.28
PCDH1-204ENST00000503492 MED14OSP0DP75 135 aa16.82■□□□□ 0.28
PCDH1-204ENST00000503492 RNASE3P12724 160 aaKnown RBP16.82■□□□□ 0.28
PCDH1-204ENST00000503492 TSPOP30536 169 aa16.82■□□□□ 0.28
PCDH1-204ENST00000503492 DEFB136Q30KP8 78 aa16.82■□□□□ 0.28
PCDH1-204ENST00000503492 IGLV2-18A0A075B6J9 118 aa16.81■□□□□ 0.28
PCDH1-204ENST00000503492 NUTF2P61970 127 aaKnown RBP16.81■□□□□ 0.28
PCDH1-204ENST00000503492 SNRPD3P62318 126 aaKnown RBP16.81■□□□□ 0.28
PCDH1-204ENST00000503492 ADAMTSL5Q6ZMM2 481 aa16.81■□□□□ 0.28
PCDH1-204ENST00000503492 PHLDA3Q9Y5J5 127 aa16.81■□□□□ 0.28
PCDH1-204ENST00000503492 SLURP1P55000 103 aa16.8■□□□□ 0.28
PCDH1-204ENST00000503492 A0A0J9YX75 114 aa16.8■□□□□ 0.28
PCDH1-204ENST00000503492 Q8N8P6 123 aa16.8■□□□□ 0.28
PCDH1-204ENST00000503492 PLA2G2AP14555 144 aa16.79■□□□□ 0.28
PCDH1-204ENST00000503492 LEPP41159 167 aa16.79■□□□□ 0.28
PCDH1-204ENST00000503492 BATFQ16520 125 aa16.79■□□□□ 0.28
PCDH1-204ENST00000503492 IFI27L1Q96BM0 104 aa16.79■□□□□ 0.28
PCDH1-204ENST00000503492 ITPR3Q14573 2671 aa16.79■□□□□ 0.28
PCDH1-204ENST00000503492 PRSS47A8MTI9 375 aa16.79■□□□□ 0.28
PCDH1-204ENST00000503492 HSBP1L1C9JCN9 74 aa16.79■□□□□ 0.28
PCDH1-204ENST00000503492 TCTEX1D4Q5JR98 221 aa16.79■□□□□ 0.28
PCDH1-204ENST00000503492 TP73-AS1Q9UF72 201 aa16.79■□□□□ 0.28
PCDH1-204ENST00000503492 FCER1GP30273 86 aa16.78■□□□□ 0.28
PCDH1-204ENST00000503492 DEFB125Q8N687 156 aa16.78■□□□□ 0.28
PCDH1-204ENST00000503492 MRAP2Q96G30 205 aa16.78■□□□□ 0.28
PCDH1-204ENST00000503492 TENM4Q6N022 2769 aa16.77■□□□□ 0.28
PCDH1-204ENST00000503492 TRAV12-3A0A0B4J271 114 aa16.77■□□□□ 0.28
PCDH1-204ENST00000503492 IGKV3-20P01619 116 aa16.77■□□□□ 0.28
PCDH1-204ENST00000503492 TMEM86BQ8N661 226 aa16.77■□□□□ 0.28
PCDH1-204ENST00000503492 ODF3Q96PU9 254 aa16.77■□□□□ 0.28
PCDH1-204ENST00000503492 MRPS16Q9Y3D3 137 aaKnown RBP16.77■□□□□ 0.28
PCDH1-204ENST00000503492 TLN2Q9Y4G6 2542 aa16.77■□□□□ 0.27
PCDH1-204ENST00000503492 LGALS9BQ3B8N2 356 aa16.77■□□□□ 0.27
PCDH1-204ENST00000503492 LGALS9CQ6DKI2 356 aa16.77■□□□□ 0.27
PCDH1-204ENST00000503492 FAM159AQ6UWV7 190 aa16.77■□□□□ 0.27
PCDH1-204ENST00000503492 C14orf178Q8N769 122 aaPredicted RBP16.77■□□□□ 0.27
PCDH1-204ENST00000503492 DPH3P1Q9H4G8 78 aa16.76■□□□□ 0.27
PCDH1-204ENST00000503492 C7orf71A4D174 169 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms