RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 FAM223AQ8IWN6 122 aa13.55□□□□□ -0.24
HMGXB3-201ENST00000502717 PROP1O75360 226 aa13.54□□□□□ -0.24
HMGXB3-201ENST00000502717 TEN1Q86WV5 123 aa13.54□□□□□ -0.24
HMGXB3-201ENST00000502717 KAAG1Q9UBP8 84 aa13.54□□□□□ -0.24
HMGXB3-201ENST00000502717 FOXI1Q12951 378 aa13.54□□□□□ -0.24
HMGXB3-201ENST00000502717 TTTY13Q9BZ97 58 aa13.54□□□□□ -0.24
HMGXB3-201ENST00000502717 IGKV1-17P01599 117 aa13.54□□□□□ -0.24
HMGXB3-201ENST00000502717 PRR30Q53SZ7 412 aaPredicted RBP13.54□□□□□ -0.24
HMGXB3-201ENST00000502717 ZNF493Q6ZR52 646 aa13.54□□□□□ -0.24
HMGXB3-201ENST00000502717 Q96MF0 132 aa13.54□□□□□ -0.24
HMGXB3-201ENST00000502717 SDHAF1A6NFY7 115 aa13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 NTN5Q8WTR8 489 aaPredicted RBP13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 RASL10AQ92737 203 aa13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 RBAKDNA6NC62 111 aa13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 GATA1P15976 413 aaPredicted RBP13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 STHQ8IWL8 128 aa13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 OVOL2Q9BRP0 275 aa13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 EDA2RQ9HAV5 297 aa13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 TECTAO75443 2155 aa13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 PTPN13Q12923 2485 aa13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 FREM1Q5H8C1 2179 aa13.53□□□□□ -0.24
HMGXB3-201ENST00000502717 I3L2K1 104 aa13.52□□□□□ -0.24
HMGXB3-201ENST00000502717 CFC1BP0CG36 223 aa13.52□□□□□ -0.24
HMGXB3-201ENST00000502717 CFC1P0CG37 223 aa13.52□□□□□ -0.24
HMGXB3-201ENST00000502717 ODF1Q14990 250 aa13.52□□□□□ -0.24
HMGXB3-201ENST00000502717 MLST8Q9BVC4 326 aa13.52□□□□□ -0.24
HMGXB3-201ENST00000502717 E7EQL1 145 aa13.52□□□□□ -0.24
HMGXB3-201ENST00000502717 USMG5Q96IX5 58 aa13.52□□□□□ -0.24
HMGXB3-201ENST00000502717 SS18L2Q9UHA2 77 aa13.52□□□□□ -0.24
HMGXB3-201ENST00000502717 FCN3O75636 299 aa13.52□□□□□ -0.25
HMGXB3-201ENST00000502717 LINC00310P59036 64 aa13.52□□□□□ -0.25
HMGXB3-201ENST00000502717 DYNAPQ8N1N2 210 aa13.52□□□□□ -0.25
HMGXB3-201ENST00000502717 ATP6V0E2Q8NHE4 81 aa13.52□□□□□ -0.25
HMGXB3-201ENST00000502717 CRYBA4P53673 196 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 C15orf53Q8NAA6 179 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 BPESC1Q9GZL8 116 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 MYO18BQ8IUG5 2567 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 UBE2DNLQ8IWF7 75 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 MED13LQ71F56 2210 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 CRPP02741 224 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 MSRB1Q9NZV6 116 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 ANXA2RQ3ZCQ2 193 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 CFHR4Q92496 578 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 TP73-AS1Q9UF72 201 aa13.51□□□□□ -0.25
HMGXB3-201ENST00000502717 MSMBP08118 114 aa13.5□□□□□ -0.25
HMGXB3-201ENST00000502717 INAFM2P0DMQ5 153 aa13.5□□□□□ -0.25
HMGXB3-201ENST00000502717 RHPN1-AS1Q9BWJ2 59 aa13.5□□□□□ -0.25
HMGXB3-201ENST00000502717 LINC00322Q6ZN03 302 aaPredicted RBP13.5□□□□□ -0.25
HMGXB3-201ENST00000502717 MRPL36Q9P0J6 103 aaKnown RBP13.5□□□□□ -0.25
HMGXB3-201ENST00000502717 TRAV26-1A0A087WT03 109 aa13.5□□□□□ -0.25
HMGXB3-201ENST00000502717 TRAV12-1A0A0B4J245 112 aa13.5□□□□□ -0.25
HMGXB3-201ENST00000502717 H3BUX3 64 aa13.5□□□□□ -0.25
HMGXB3-201ENST00000502717 AGPAT4-IT1Q9H0P7 198 aa13.5□□□□□ -0.25
HMGXB3-201ENST00000502717 SPRNQ5BIV9 151 aa13.49□□□□□ -0.25
HMGXB3-201ENST00000502717 TRGV2A0A075B6R0 118 aa13.49□□□□□ -0.25
HMGXB3-201ENST00000502717 IGHV1-69DA0A0B4J2H0 117 aa13.49□□□□□ -0.25
HMGXB3-201ENST00000502717 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
HMGXB3-201ENST00000502717 CRYGCP07315 174 aa13.49□□□□□ -0.25
HMGXB3-201ENST00000502717 MRPL53Q96EL3 112 aaKnown RBP13.49□□□□□ -0.25
HMGXB3-201ENST00000502717 K7EIM0 57 aa13.49□□□□□ -0.25
HMGXB3-201ENST00000502717 ATP6V0E1O15342 81 aa13.49□□□□□ -0.25
HMGXB3-201ENST00000502717 TMEM219Q86XT9 240 aa13.49□□□□□ -0.25
HMGXB3-201ENST00000502717 LENEPQ9Y5L5 61 aa13.48□□□□□ -0.25
HMGXB3-201ENST00000502717 IGKV1D-37A0A075B6S9 117 aa13.48□□□□□ -0.25
HMGXB3-201ENST00000502717 I3L3M4 83 aa13.48□□□□□ -0.25
HMGXB3-201ENST00000502717 S100A7L2Q5SY68 101 aa13.48□□□□□ -0.25
HMGXB3-201ENST00000502717 SPAG8Q99932 426 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-201ENST00000502717 GAGE2AQ6NT46 116 aa13.48□□□□□ -0.25
HMGXB3-201ENST00000502717 Q8N976 141 aa13.48□□□□□ -0.25
HMGXB3-201ENST00000502717 E7EUB6 86 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 LEPROTO15243 131 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 TCTEX1D4Q5JR98 221 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 LOXL1Q08397 574 aaPredicted RBP13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 UTF1Q5T230 341 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 IGHV3-73A0A0B4J1V6 119 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 IGLV2-23P01705 113 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 LINC00158P58513 81 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 ANKRD29Q8N6D5 301 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 CARD19Q96LW7 228 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 NDUFA12Q9UI09 145 aa13.47□□□□□ -0.25
HMGXB3-201ENST00000502717 GTF3C1Q12789 2109 aa13.46□□□□□ -0.25
HMGXB3-201ENST00000502717 ADARB2-AS1A8MUL3 147 aa13.46□□□□□ -0.25
HMGXB3-201ENST00000502717 DAZ1Q9NQZ3 744 aaKnown RBP13.46□□□□□ -0.25
HMGXB3-201ENST00000502717 MALRD1Q5VYJ5 2156 aa13.46□□□□□ -0.25
HMGXB3-201ENST00000502717 SPRY4Q9C004 299 aa13.46□□□□□ -0.25
HMGXB3-201ENST00000502717 HIVEP2P31629 2446 aa13.46□□□□□ -0.26
HMGXB3-201ENST00000502717 PRO3102Q9H379 93 aa13.45□□□□□ -0.26
HMGXB3-201ENST00000502717 IGHG4P01861 327 aa13.45□□□□□ -0.26
HMGXB3-201ENST00000502717 IGFL2Q6UWQ7 119 aa13.45□□□□□ -0.26
HMGXB3-201ENST00000502717 PRIMA1Q86XR5 153 aa13.45□□□□□ -0.26
HMGXB3-201ENST00000502717 TMEM86BQ8N661 226 aa13.45□□□□□ -0.26
HMGXB3-201ENST00000502717 CTSZQ9UBR2 303 aa13.45□□□□□ -0.26
HMGXB3-201ENST00000502717 BRD3OSQ6XYD6 125 aa13.45□□□□□ -0.26
HMGXB3-201ENST00000502717 FAM215AQ9Y5M1 114 aa13.45□□□□□ -0.26
HMGXB3-201ENST00000502717 E9PLD3 99 aa13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 CGB3P0DN86 165 aa13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 CGB7P0DN87 165 aa13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 HIST1H4AP62805 103 aaKnown RBP13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 ZNF415Q09FC8 603 aa13.44□□□□□ -0.26
HMGXB3-201ENST00000502717 NUP210LQ5VU65 1888 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms