RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 F8W1H4 67 aa15.06■□□□□ 0
COL27A1-207ENST00000494090 FOXE3Q13461 319 aa15.06■□□□□ 0
COL27A1-207ENST00000494090 KLF2Q9Y5W3 355 aaPredicted RBP15.06■□□□□ 0
COL27A1-207ENST00000494090 CEND1Q8N111 149 aa15.05■□□□□ 0
COL27A1-207ENST00000494090 IGF2BP2-AS1Q96M15 143 aa15.05■□□□□ 0
COL27A1-207ENST00000494090 IGHV3-38A0A0C4DH36 116 aa15.05■□□□□ -0
COL27A1-207ENST00000494090 ANGP03950 147 aaKnown RBP15.05■□□□□ -0
COL27A1-207ENST00000494090 CGB3P0DN86 165 aa15.05■□□□□ -0
COL27A1-207ENST00000494090 DEFB113Q30KQ7 82 aa15.05■□□□□ -0
COL27A1-207ENST00000494090 ZNF493Q6ZR52 646 aa15.05■□□□□ -0
COL27A1-207ENST00000494090 PLA2G2EQ9NZK7 142 aa15.05■□□□□ -0
COL27A1-207ENST00000494090 UTF1Q5T230 341 aa15.05■□□□□ -0
COL27A1-207ENST00000494090 PRSS29PA6NIE9 313 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 BOD1L2Q8IYS8 172 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 UBL5Q9BZL1 73 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 PLXNB3Q9ULL4 1909 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 DENND4CQ5VZ89 1909 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 CCL24O00175 119 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 ZNF747Q9BV97 191 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 CACNA1HO95180 2353 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 CENPVL3A0A0U1RRI6 287 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 C9orf66Q5T8R8 295 aa15.04■□□□□ -0
COL27A1-207ENST00000494090 DYNAPQ8N1N2 210 aa15.03■□□□□ -0
COL27A1-207ENST00000494090 DOCK7Q96N67 2140 aa15.03■□□□□ -0
COL27A1-207ENST00000494090 IGHV4-59P01825 116 aa15.03■□□□□ -0
COL27A1-207ENST00000494090 K7EP13 123 aa15.03■□□□□ -0
COL27A1-207ENST00000494090 TCF15Q12870 199 aa15.03■□□□□ -0
COL27A1-207ENST00000494090 A0A1W2PPM0 123 aa15.03■□□□□ -0
COL27A1-207ENST00000494090 EGR2P11161 476 aaPredicted RBP15.03■□□□□ -0
COL27A1-207ENST00000494090 PPDPFLQ8WWR9 84 aa15.03■□□□□ -0
COL27A1-207ENST00000494090 SPRNQ5BIV9 151 aa15.02■□□□□ -0
COL27A1-207ENST00000494090 DOCK9Q9BZ29 2069 aa15.02■□□□□ -0
COL27A1-207ENST00000494090 NXPH4O95158 308 aa15.02■□□□□ -0
COL27A1-207ENST00000494090 AGPAT4-IT1Q9H0P7 198 aa15.02■□□□□ -0
COL27A1-207ENST00000494090 SCRT2Q9NQ03 307 aa15.02■□□□□ -0
COL27A1-207ENST00000494090 DKK2Q9UBU2 259 aa15.02□□□□□ -0.01
COL27A1-207ENST00000494090 Q71RC1 249 aaPredicted RBP15.01□□□□□ -0.01
COL27A1-207ENST00000494090 NBASA2RRP1 2371 aa15.01□□□□□ -0.01
COL27A1-207ENST00000494090 HLA-DMBP28068 263 aa15.01□□□□□ -0.01
COL27A1-207ENST00000494090 NPBQ8NG41 125 aa15.01□□□□□ -0.01
COL27A1-207ENST00000494090 EDA2RQ9HAV5 297 aa15.01□□□□□ -0.01
COL27A1-207ENST00000494090 PRO1854Q9UHT4 67 aa15.01□□□□□ -0.01
COL27A1-207ENST00000494090 CGB7P0DN87 165 aa15□□□□□ -0.01
COL27A1-207ENST00000494090 GP9P14770 177 aa15□□□□□ -0.01
COL27A1-207ENST00000494090 MAJINQ3KP22 176 aa15□□□□□ -0.01
COL27A1-207ENST00000494090 J3QQQ9 107 aa15□□□□□ -0.01
COL27A1-207ENST00000494090 KIR2DL5BA0A0G2JN68 375 aa15□□□□□ -0.01
COL27A1-207ENST00000494090 KIR2DL5BA0A0G2JPC4 375 aa15□□□□□ -0.01
COL27A1-207ENST00000494090 SH2D6Q7Z4S9 175 aa15□□□□□ -0.01
COL27A1-207ENST00000494090 KIR2DL5AQ8N109 375 aa15□□□□□ -0.01
COL27A1-207ENST00000494090 CREBBPQ92793 2442 aa14.99□□□□□ -0.01
COL27A1-207ENST00000494090 CFHR4Q92496 578 aa14.99□□□□□ -0.01
COL27A1-207ENST00000494090 I3L2K1 104 aa14.99□□□□□ -0.01
COL27A1-207ENST00000494090 CRLF1O75462 422 aa14.99□□□□□ -0.01
COL27A1-207ENST00000494090 ETDBQ3ZM63 59 aa14.99□□□□□ -0.01
COL27A1-207ENST00000494090 FGF6P10767 208 aa14.99□□□□□ -0.01
COL27A1-207ENST00000494090 U3KQE9 123 aa14.99□□□□□ -0.01
COL27A1-207ENST00000494090 WT1P19544 449 aaPredicted RBP14.98□□□□□ -0.01
COL27A1-207ENST00000494090 SUMO4Q6EEV6 95 aa14.98□□□□□ -0.01
COL27A1-207ENST00000494090 DSCR8Q96T75 97 aa14.98□□□□□ -0.01
COL27A1-207ENST00000494090 NOP10Q9NPE3 64 aaKnown RBP14.98□□□□□ -0.01
COL27A1-207ENST00000494090 DKK4Q9UBT3 224 aa14.98□□□□□ -0.01
COL27A1-207ENST00000494090 CDPF1Q6NVV7 123 aa14.97□□□□□ -0.01
COL27A1-207ENST00000494090 PATE2Q6UY27 113 aa14.96□□□□□ -0.01
COL27A1-207ENST00000494090 IGHV4-61A0A0C4DH41 118 aa14.96□□□□□ -0.01
COL27A1-207ENST00000494090 TRAV25A0A0B4J276 109 aa14.96□□□□□ -0.01
COL27A1-207ENST00000494090 K7EIM0 57 aa14.96□□□□□ -0.01
COL27A1-207ENST00000494090 GNRH2O43555 120 aa14.95□□□□□ -0.02
COL27A1-207ENST00000494090 C16orf74Q96GX8 76 aa14.95□□□□□ -0.02
COL27A1-207ENST00000494090 HERV-K104P63124 156 aa14.95□□□□□ -0.02
COL27A1-207ENST00000494090 IGKV2D-24A0A075B6R9 120 aa14.95□□□□□ -0.02
COL27A1-207ENST00000494090 IGFBPL1Q8WX77 278 aa14.94□□□□□ -0.02
COL27A1-207ENST00000494090 IGKV1-17P01599 117 aa14.94□□□□□ -0.02
COL27A1-207ENST00000494090 C12orf74Q32Q52 190 aa14.94□□□□□ -0.02
COL27A1-207ENST00000494090 IGLV11-55A0A075B6I3 123 aa14.94□□□□□ -0.02
COL27A1-207ENST00000494090 K7ERJ3 54 aa14.94□□□□□ -0.02
COL27A1-207ENST00000494090 GRNP28799 593 aaKnown RBP14.94□□□□□ -0.02
COL27A1-207ENST00000494090 DAZAP2Q15038 168 aaPredicted RBP14.94□□□□□ -0.02
COL27A1-207ENST00000494090 MORN5Q5VZ52 161 aa14.94□□□□□ -0.02
COL27A1-207ENST00000494090 C1orf43Q9BWL3 253 aa14.94□□□□□ -0.02
COL27A1-207ENST00000494090 IGHV7-81A0A0B4J1V7 117 aa14.93□□□□□ -0.02
COL27A1-207ENST00000494090 F6UB75 175 aa14.93□□□□□ -0.02
COL27A1-207ENST00000494090 MRPL23Q16540 153 aaKnown RBP14.93□□□□□ -0.02
COL27A1-207ENST00000494090 SLC25A29Q8N8R3 303 aa14.93□□□□□ -0.02
COL27A1-207ENST00000494090 C10orf105Q8TEF2 133 aa14.93□□□□□ -0.02
COL27A1-207ENST00000494090 A0A096LPF7 62 aa14.93□□□□□ -0.02
COL27A1-207ENST00000494090 DOCK10Q96BY6 2186 aa14.93□□□□□ -0.02
COL27A1-207ENST00000494090 UBE2BP63146 152 aa14.93□□□□□ -0.02
COL27A1-207ENST00000494090 RITA1Q96K30 269 aa14.93□□□□□ -0.02
COL27A1-207ENST00000494090 SPART-AS1P0CW21 52 aa14.92□□□□□ -0.02
COL27A1-207ENST00000494090 NUPR1O60356 82 aa14.92□□□□□ -0.02
COL27A1-207ENST00000494090 IGLV2-14P01704 120 aa14.92□□□□□ -0.02
COL27A1-207ENST00000494090 HAMPP81172 84 aa14.92□□□□□ -0.02
COL27A1-207ENST00000494090 FAM167A-AS1Q96KT0 104 aa14.92□□□□□ -0.02
COL27A1-207ENST00000494090 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.92□□□□□ -0.025e-11■■■□□ 14.9
COL27A1-207ENST00000494090 IGKV1OR2-108A0A075B7D4 117 aa14.92□□□□□ -0.02
COL27A1-207ENST00000494090 IGHV4-30-2A0A087WSY4 118 aa14.92□□□□□ -0.02
COL27A1-207ENST00000494090 H3BMG7 143 aa14.91□□□□□ -0.02
COL27A1-207ENST00000494090 COL4A3Q01955 1670 aa14.91□□□□□ -0.02
COL27A1-207ENST00000494090 ATP5G1P05496 136 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms