RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 H7BYZ3 331 aa14.06□□□□□ -0.16
USP39-218ENST00000493829 C20orf144Q9BQM9 153 aa14.06□□□□□ -0.16
USP39-218ENST00000493829 RPP21Q9H633 154 aaKnown RBP14.06□□□□□ -0.16
USP39-218ENST00000493829 GRIFINA4D1Z8 144 aa14.05□□□□□ -0.16
USP39-218ENST00000493829 TMEM189A5PLL7 270 aa14.05□□□□□ -0.16
USP39-218ENST00000493829 GATCO43716 136 aaKnown RBP14.05□□□□□ -0.16
USP39-218ENST00000493829 GZMBP10144 247 aa14.05□□□□□ -0.16
USP39-218ENST00000493829 RNF212Q495C1 297 aa14.05□□□□□ -0.16
USP39-218ENST00000493829 TMEM256Q8N2U0 113 aa14.05□□□□□ -0.16
USP39-218ENST00000493829 C15orf54Q8N8G6 183 aa14.05□□□□□ -0.16
USP39-218ENST00000493829 CLRN3Q8NCR9 226 aa14.05□□□□□ -0.16
USP39-218ENST00000493829 OR10G8Q8NGN5 311 aa14.05□□□□□ -0.16
USP39-218ENST00000493829 LINC01559Q495D7 138 aa14.04□□□□□ -0.16
USP39-218ENST00000493829 ZNF705AQ6ZN79 300 aaPredicted RBP14.04□□□□□ -0.16
USP39-218ENST00000493829 FAM231DQ6ZW35 169 aa14.04□□□□□ -0.16
USP39-218ENST00000493829 SVBPQ8N300 66 aa14.04□□□□□ -0.16
USP39-218ENST00000493829 PYGO2Q9BRQ0 406 aa14.04□□□□□ -0.16
USP39-218ENST00000493829 GNRH2O43555 120 aa14.04□□□□□ -0.16
USP39-218ENST00000493829 TYMSP04818 313 aa14.04□□□□□ -0.16
USP39-218ENST00000493829 Q6ZWC4 215 aa14.04□□□□□ -0.16
USP39-218ENST00000493829 OSTCQ9NRP0 149 aa14.04□□□□□ -0.16
USP39-218ENST00000493829 TIMM8BQ9Y5J9 83 aaPredicted RBP14.04□□□□□ -0.16
USP39-218ENST00000493829 SPRY2O43597 315 aa14.03□□□□□ -0.16
USP39-218ENST00000493829 AZU1P20160 251 aa14.03□□□□□ -0.16
USP39-218ENST00000493829 OR11H2Q8NH07 326 aa14.03□□□□□ -0.16
USP39-218ENST00000493829 RNF183Q96D59 192 aa14.03□□□□□ -0.16
USP39-218ENST00000493829 NBEAL2Q6ZNJ1 2754 aa14.02□□□□□ -0.16
USP39-218ENST00000493829 V9GYV3 84 aa14.02□□□□□ -0.16
USP39-218ENST00000493829 X6R8D5 127 aa14.02□□□□□ -0.16
USP39-218ENST00000493829 SNAPINO95295 136 aa14.01□□□□□ -0.17
USP39-218ENST00000493829 MT-ND4LP03901 98 aa14.01□□□□□ -0.17
USP39-218ENST00000493829 KCNS1Q96KK3 526 aa14.01□□□□□ -0.17
USP39-218ENST00000493829 TPPP3Q9BW30 176 aa14.01□□□□□ -0.17
USP39-218ENST00000493829 RPS10P5Q9NQ39 176 aa14.01□□□□□ -0.17
USP39-218ENST00000493829 C7orf77A4D0Y5 90 aa14.01□□□□□ -0.17
USP39-218ENST00000493829 TCL1AP56279 114 aa14.01□□□□□ -0.17
USP39-218ENST00000493829 ATRAIDQ6UW56 229 aa14.01□□□□□ -0.17
USP39-218ENST00000493829 OVOL2Q9BRP0 275 aa14.01□□□□□ -0.17
USP39-218ENST00000493829 H3BVH4 76 aa14□□□□□ -0.17
USP39-218ENST00000493829 RRN3P1Q2M238 152 aa14□□□□□ -0.17
USP39-218ENST00000493829 TDRG1Q3Y452 100 aa14□□□□□ -0.17
USP39-218ENST00000493829 MDFICQ9P1T7 246 aa14□□□□□ -0.17
USP39-218ENST00000493829 TRGV11A0A075B6L2 103 aa13.99□□□□□ -0.17
USP39-218ENST00000493829 DEFB4AO15263 64 aa13.99□□□□□ -0.17
USP39-218ENST00000493829 S100A4P26447 101 aaKnown RBP13.99□□□□□ -0.17
USP39-218ENST00000493829 ASIPP42127 132 aa13.99□□□□□ -0.17
USP39-218ENST00000493829 EMP1P54849 157 aa13.99□□□□□ -0.17
USP39-218ENST00000493829 RHEBQ15382 184 aa13.99□□□□□ -0.17
USP39-218ENST00000493829 ZNF575Q86XF7 245 aa13.99□□□□□ -0.17
USP39-218ENST00000493829 LINC00467Q9BRT7 94 aa13.98□□□□□ -0.17
USP39-218ENST00000493829 IGHV3-16A0A0C4DH30 117 aa13.98□□□□□ -0.17
USP39-218ENST00000493829 MUC21A0A0G2JKD1 596 aa13.98□□□□□ -0.17
USP39-218ENST00000493829 MUC21A0A140T8X8 626 aa13.98□□□□□ -0.17
USP39-218ENST00000493829 PPP1R2P9O14990 202 aa13.98□□□□□ -0.17
USP39-218ENST00000493829 RPS20P60866 119 aaKnown RBP13.98□□□□□ -0.17
USP39-218ENST00000493829 SPATA25Q9BR10 227 aa13.98□□□□□ -0.17
USP39-218ENST00000493829 GSN-AS1Q9NRJ2 163 aa13.98□□□□□ -0.17
USP39-218ENST00000493829 IGHV4-28A0A0C4DH34 117 aa13.97□□□□□ -0.17
USP39-218ENST00000493829 XKRY2A2RUG3 117 aa13.97□□□□□ -0.17
USP39-218ENST00000493829 SSTP61278 116 aa13.97□□□□□ -0.17
USP39-218ENST00000493829 RNASE8Q8TDE3 154 aaKnown RBP13.97□□□□□ -0.17
USP39-218ENST00000493829 TMEM263Q8WUH6 116 aaKnown RBP13.97□□□□□ -0.17
USP39-218ENST00000493829 ANAPC16Q96DE5 110 aa13.97□□□□□ -0.17
USP39-218ENST00000493829 B9D2Q9BPU9 175 aa13.97□□□□□ -0.17
USP39-218ENST00000493829 TM2D3Q9BRN9 247 aa13.97□□□□□ -0.17
USP39-218ENST00000493829 A8MWL6 223 aa13.96□□□□□ -0.17
USP39-218ENST00000493829 ZNF415Q09FC8 603 aa13.96□□□□□ -0.17
USP39-218ENST00000493829 CT83Q5H943 113 aa13.96□□□□□ -0.17
USP39-218ENST00000493829 GTSF1Q8WW33 167 aa13.96□□□□□ -0.17
USP39-218ENST00000493829 C16orf74Q96GX8 76 aa13.96□□□□□ -0.17
USP39-218ENST00000493829 NEU1Q99519 415 aa13.96□□□□□ -0.17
USP39-218ENST00000493829 TP53TG1Q9Y2A0 90 aa13.96□□□□□ -0.17
USP39-218ENST00000493829 RNASE3P12724 160 aaKnown RBP13.95□□□□□ -0.18
USP39-218ENST00000493829 C11orf72Q8NBR9 251 aa13.95□□□□□ -0.18
USP39-218ENST00000493829 TSKUQ8WUA8 353 aa13.95□□□□□ -0.18
USP39-218ENST00000493829 ARMS2P0C7Q2 107 aa13.95□□□□□ -0.18
USP39-218ENST00000493829 S100A1P23297 94 aa13.95□□□□□ -0.18
USP39-218ENST00000493829 FER1L6-AS1Q8NA97 138 aa13.95□□□□□ -0.18
USP39-218ENST00000493829 PGLYRP4Q96LB8 373 aa13.95□□□□□ -0.18
USP39-218ENST00000493829 HIGD1CA8MV81 97 aa13.94□□□□□ -0.18
USP39-218ENST00000493829 Q8NAQ8 132 aa13.94□□□□□ -0.18
USP39-218ENST00000493829 CTDSP1Q9GZU7 261 aa13.94□□□□□ -0.18
USP39-218ENST00000493829 IL36BQ9NZH7 164 aa13.94□□□□□ -0.18
USP39-218ENST00000493829 PLAC8L1A1L4L8 177 aa13.93□□□□□ -0.18
USP39-218ENST00000493829 SMIM9A6NGZ8 99 aa13.93□□□□□ -0.18
USP39-218ENST00000493829 SNURFLB1AK76 121 aa13.93□□□□□ -0.18
USP39-218ENST00000493829 MIFP14174 115 aa13.93□□□□□ -0.18
USP39-218ENST00000493829 ZMAT4Q9H898 229 aa13.93□□□□□ -0.18
USP39-218ENST00000493829 A0A087WWC5 75 aa13.92□□□□□ -0.18
USP39-218ENST00000493829 SPINK4O60575 86 aa13.92□□□□□ -0.18
USP39-218ENST00000493829 CXCL1P09341 107 aa13.92□□□□□ -0.18
USP39-218ENST00000493829 IGLC6P0CF74 106 aa13.92□□□□□ -0.18
USP39-218ENST00000493829 FAM3BP58499 235 aaPredicted RBP13.92□□□□□ -0.18
USP39-218ENST00000493829 LYZL1Q6UWQ5 148 aa13.92□□□□□ -0.18
USP39-218ENST00000493829 OR10AG1Q8NH19 301 aa13.92□□□□□ -0.18
USP39-218ENST00000493829 NOP10Q9NPE3 64 aaKnown RBP13.92□□□□□ -0.18
USP39-218ENST00000493829 URGCP-MRPS24S4R325 110 aa13.92□□□□□ -0.18
USP39-218ENST00000493829 SMIM27A0A1W2PRY6 76 aa13.91□□□□□ -0.18
USP39-218ENST00000493829 SCO1O75880 301 aa13.91□□□□□ -0.18
USP39-218ENST00000493829 ZNF493Q6ZR52 646 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms