RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 PRR25Q96S07 402 aa17.35■□□□□ 0.37
USF3-203ENST00000491165 RABAC1Q9UI14 185 aa17.35■□□□□ 0.37
USF3-203ENST00000491165 H3BUA1 57 aa17.34■□□□□ 0.37
USF3-203ENST00000491165 NUDT3O95989 172 aa17.34■□□□□ 0.37
USF3-203ENST00000491165 KRTAP10-3P60369 221 aa17.34■□□□□ 0.37
USF3-203ENST00000491165 CCDC140Q96MF4 163 aa17.34■□□□□ 0.37
USF3-203ENST00000491165 IGHV3-11P01762 117 aa17.33■□□□□ 0.37
USF3-203ENST00000491165 FOXE3Q13461 319 aa17.33■□□□□ 0.37
USF3-203ENST00000491165 AMN1Q8IY45 258 aa17.33■□□□□ 0.37
USF3-203ENST00000491165 ORMDL3Q8N138 153 aa17.33■□□□□ 0.37
USF3-203ENST00000491165 RNF152Q8N8N0 203 aa17.33■□□□□ 0.37
USF3-203ENST00000491165 MYOZ3Q8TDC0 251 aa17.33■□□□□ 0.37
USF3-203ENST00000491165 PRELID3AQ96N28 172 aa17.33■□□□□ 0.37
USF3-203ENST00000491165 CTSGP08311 255 aa17.33■□□□□ 0.36
USF3-203ENST00000491165 C12orf54Q6X4T0 127 aa17.33■□□□□ 0.36
USF3-203ENST00000491165 C18orf65Q6ZTR6 163 aa17.33■□□□□ 0.36
USF3-203ENST00000491165 SIGLEC8Q9NYZ4 499 aa17.33■□□□□ 0.36
USF3-203ENST00000491165 ELANEP08246 267 aa17.32■□□□□ 0.36
USF3-203ENST00000491165 RPS20P60866 119 aaKnown RBP17.32■□□□□ 0.36
USF3-203ENST00000491165 BVES-AS1Q5T3Y7 98 aa17.32■□□□□ 0.36
USF3-203ENST00000491165 LOC389332A0A1B0GUA5 103 aa17.32■□□□□ 0.36
USF3-203ENST00000491165 CD28P10747 220 aa17.32■□□□□ 0.36
USF3-203ENST00000491165 FAM223BA6NKX1 122 aa17.31■□□□□ 0.36
USF3-203ENST00000491165 TRBV12-3P01733 135 aa17.31■□□□□ 0.36
USF3-203ENST00000491165 S100A7P31151 101 aa17.31■□□□□ 0.36
USF3-203ENST00000491165 FAM106AQ4KMX7 169 aa17.31■□□□□ 0.36
USF3-203ENST00000491165 FAM223AQ8IWN6 122 aa17.31■□□□□ 0.36
USF3-203ENST00000491165 ZNF502Q8TBZ5 544 aa17.31■□□□□ 0.36
USF3-203ENST00000491165 A0A096LNJ9 63 aa17.3■□□□□ 0.36
USF3-203ENST00000491165 NCR2O95944 276 aa17.3■□□□□ 0.36
USF3-203ENST00000491165 BMI1P35226 326 aa17.3■□□□□ 0.36
USF3-203ENST00000491165 MRPL51Q4U2R6 128 aaKnown RBP17.3■□□□□ 0.36
USF3-203ENST00000491165 Q8TAT8 98 aa17.3■□□□□ 0.36
USF3-203ENST00000491165 SMAD5-AS1Q9Y6J3 95 aa17.3■□□□□ 0.36
USF3-203ENST00000491165 TMEM89A2RUT3 159 aa17.3■□□□□ 0.36
USF3-203ENST00000491165 HIST1H1AQ02539 215 aaPredicted RBP17.3■□□□□ 0.36
USF3-203ENST00000491165 ATP5G2Q06055 141 aa17.3■□□□□ 0.36
USF3-203ENST00000491165 COX8AP10176 69 aa17.29■□□□□ 0.36
USF3-203ENST00000491165 FER1L6-AS1Q8NA97 138 aa17.29■□□□□ 0.36
USF3-203ENST00000491165 VGLL1Q99990 258 aa17.29■□□□□ 0.36
USF3-203ENST00000491165 TRRAPQ9Y4A5 3859 aa17.29■□□□□ 0.36
USF3-203ENST00000491165 OR8A1Q8NGG7 326 aa17.29■□□□□ 0.36
USF3-203ENST00000491165 CBY1Q9Y3M2 126 aa17.29■□□□□ 0.36
USF3-203ENST00000491165 COL6A5A8TX70 2615 aa17.28■□□□□ 0.36
USF3-203ENST00000491165 MUC21A0A0G2JKD1 596 aa17.28■□□□□ 0.36
USF3-203ENST00000491165 MUC21A0A140T8X8 626 aa17.28■□□□□ 0.36
USF3-203ENST00000491165 GPR183P32249 361 aa17.28■□□□□ 0.36
USF3-203ENST00000491165 MUC21Q5SSG8 566 aa17.28■□□□□ 0.36
USF3-203ENST00000491165 CLEC19AQ6UXS0 136 aa17.28■□□□□ 0.36
USF3-203ENST00000491165 OR4X2Q8NGF9 303 aa17.28■□□□□ 0.36
USF3-203ENST00000491165 USMG5Q96IX5 58 aa17.28■□□□□ 0.36
USF3-203ENST00000491165 CLEC3BP05452 202 aa17.27■□□□□ 0.36
USF3-203ENST00000491165 ZNF80P51504 273 aaPredicted RBP17.27■□□□□ 0.36
USF3-203ENST00000491165 TWIST1Q15672 202 aa17.27■□□□□ 0.36
USF3-203ENST00000491165 IGFL4Q6B9Z1 124 aa17.27■□□□□ 0.36
USF3-203ENST00000491165 DEFB125Q8N687 156 aa17.27■□□□□ 0.36
USF3-203ENST00000491165 CITED2Q99967 270 aaPredicted RBP17.27■□□□□ 0.36
USF3-203ENST00000491165 TAX1BP3O14907 124 aa17.27■□□□□ 0.35
USF3-203ENST00000491165 IGLC6P0CF74 106 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 HLA-DMBP28068 263 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 WFDC12Q8WWY7 111 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 EEF1AKMT3Q96AZ1 226 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 A0A087X0K7 114 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 CKS2P33552 79 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 VAMP3Q15836 100 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 KHDC1LQ5JSQ8 128 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 DPF1Q92782 380 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 UBE2E2Q96LR5 201 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 VWFP04275 2813 aa17.26■□□□□ 0.35
USF3-203ENST00000491165 STAB1Q9NY15 2570 aa17.25■□□□□ 0.35
USF3-203ENST00000491165 IGHV3-35A0A0C4DH35 117 aa17.25■□□□□ 0.35
USF3-203ENST00000491165 A0A0G2JLM5 398 aa17.25■□□□□ 0.35
USF3-203ENST00000491165 HBDP02042 147 aa17.25■□□□□ 0.35
USF3-203ENST00000491165 IGHV3OR16-8A0A075B7F1 116 aa17.24■□□□□ 0.35
USF3-203ENST00000491165 TRBV7-1A0A0A6YYK4 115 aa17.24■□□□□ 0.35
USF3-203ENST00000491165 DEFB136Q30KP8 78 aa17.24■□□□□ 0.35
USF3-203ENST00000491165 LGALS9BQ3B8N2 356 aa17.24■□□□□ 0.35
USF3-203ENST00000491165 LGALS9CQ6DKI2 356 aa17.24■□□□□ 0.35
USF3-203ENST00000491165 OR4C5Q8NGB2 326 aa17.24■□□□□ 0.35
USF3-203ENST00000491165 NPYP01303 97 aa17.23■□□□□ 0.35
USF3-203ENST00000491165 C2orf91Q6ZV80 131 aa17.23■□□□□ 0.35
USF3-203ENST00000491165 A0A1W2PRX2 142 aa17.23■□□□□ 0.35
USF3-203ENST00000491165 SMKR1H3BMG3 65 aa17.23■□□□□ 0.35
USF3-203ENST00000491165 ORM1P02763 201 aa17.23■□□□□ 0.35
USF3-203ENST00000491165 ADARB2-AS1A8MUL3 147 aa17.21■□□□□ 0.35
USF3-203ENST00000491165 FABP5P3A8MUU1 101 aa17.21■□□□□ 0.35
USF3-203ENST00000491165 ZNF575Q86XF7 245 aa17.21■□□□□ 0.35
USF3-203ENST00000491165 OR1N2Q8NGR9 330 aa17.21■□□□□ 0.35
USF3-203ENST00000491165 DUX3Q96PT4 197 aa17.21■□□□□ 0.35
USF3-203ENST00000491165 ZFAND3Q9H8U3 227 aa17.21■□□□□ 0.35
USF3-203ENST00000491165 LGALS1P09382 135 aaKnown RBP17.21■□□□□ 0.35
USF3-203ENST00000491165 CACNG7P62955 275 aa17.21■□□□□ 0.35
USF3-203ENST00000491165 KLHL30-AS1Q8NEE0 82 aa17.21■□□□□ 0.35
USF3-203ENST00000491165 CNFNQ9BYD5 112 aa17.21■□□□□ 0.35
USF3-203ENST00000491165 WNK1Q9H4A3 2382 aa17.2■□□□□ 0.34
USF3-203ENST00000491165 K7EP13 123 aa17.2■□□□□ 0.34
USF3-203ENST00000491165 FXYD7P58549 80 aa17.2■□□□□ 0.34
USF3-203ENST00000491165 ANKRD39Q53RE8 183 aa17.2■□□□□ 0.34
USF3-203ENST00000491165 C8orf86Q6ZUL3 223 aa17.2■□□□□ 0.34
USF3-203ENST00000491165 ERASQ7Z444 233 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms