RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 USP24Q9UPU5 2620 aa11.96□□□□□ -0.49
BRD9-208ENST00000489816 LINC01559Q495D7 138 aa11.96□□□□□ -0.5
BRD9-208ENST00000489816 IGHV7-4-1A0A0J9YVY3 117 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 GNRH2O43555 120 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 RAB9AP51151 201 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 COX8CQ7Z4L0 72 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 GPHB5Q86YW7 130 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 OR4C5Q8NGB2 326 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 ORAOV1Q8WV07 137 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 FOXC2Q99958 501 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 HIST2H2BDQ6DRA6 164 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 C14orf178Q8N769 122 aaPredicted RBP11.95□□□□□ -0.5
BRD9-208ENST00000489816 UBE2V1Q13404 147 aa11.95□□□□□ -0.5
BRD9-208ENST00000489816 RNASE8Q8TDE3 154 aaKnown RBP11.95□□□□□ -0.5
BRD9-208ENST00000489816 IGKV2D-26A0A0A0MRZ7 120 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 S100A7P31151 101 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 GTSCR1Q86UQ5 136 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 C10orf105Q8TEF2 133 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 SPOCK3Q9BQ16 436 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 MS4A6AQ9H2W1 248 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 TMEM160Q9NX00 188 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 A1L4Q6 167 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 C12orf54Q6X4T0 127 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 OR2K2Q8NGT1 345 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 PSMG3-AS1Q96PY0 264 aa11.94□□□□□ -0.5
BRD9-208ENST00000489816 C21orf62-AS1Q17RA5 79 aa11.93□□□□□ -0.5
BRD9-208ENST00000489816 DUX5Q96PT3 197 aa11.93□□□□□ -0.5
BRD9-208ENST00000489816 RHPN1-AS1Q9BWJ2 59 aa11.93□□□□□ -0.5
BRD9-208ENST00000489816 MGPP08493 103 aa11.93□□□□□ -0.5
BRD9-208ENST00000489816 FOSL1P15407 271 aa11.93□□□□□ -0.5
BRD9-208ENST00000489816 NEGR1Q7Z3B1 354 aa11.93□□□□□ -0.5
BRD9-208ENST00000489816 TRAV8-6A0A0B4J262 113 aa11.93□□□□□ -0.5
BRD9-208ENST00000489816 SMIM15Q7Z3B0 74 aa11.93□□□□□ -0.5
BRD9-208ENST00000489816 C2CD3Q4AC94 2353 aa11.93□□□□□ -0.5
BRD9-208ENST00000489816 NPFFR1Q9GZQ6 430 aa11.92□□□□□ -0.5
BRD9-208ENST00000489816 U3KQE9 123 aa11.92□□□□□ -0.5
BRD9-208ENST00000489816 ACANP16112 2415 aa11.92□□□□□ -0.5
BRD9-208ENST00000489816 FGF6P10767 208 aa11.92□□□□□ -0.5
BRD9-208ENST00000489816 LGALS9BQ3B8N2 356 aa11.92□□□□□ -0.5
BRD9-208ENST00000489816 ANXA2RQ3ZCQ2 193 aa11.92□□□□□ -0.5
BRD9-208ENST00000489816 TMEM97Q5BJF2 176 aa11.92□□□□□ -0.5
BRD9-208ENST00000489816 LGALS9CQ6DKI2 356 aa11.92□□□□□ -0.5
BRD9-208ENST00000489816 RPL39LQ96EH5 51 aaKnown RBP11.92□□□□□ -0.5
BRD9-208ENST00000489816 IGHV4-59P01825 116 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 SMIM17P0DL12 118 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 OR10J6PQ8NGY7 276 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 MSMBP08118 114 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 RNF151Q2KHN1 245 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 C9orf47Q6ZRZ4 202 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 DEFB125Q8N687 156 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 MTORP42345 2549 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 SFTPCP11686 197 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
BRD9-208ENST00000489816 RBAKDNA6NC62 111 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 JPT2Q9H910 190 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 MUC4Q99102 2169 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 NACAE9PAV3 2078 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 CHD6Q8TD26 2715 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 FAM223BA6NKX1 122 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 CD5LO43866 347 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 FCER1GP30273 86 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 PHLDA3Q9Y5J5 127 aa11.9□□□□□ -0.5
BRD9-208ENST00000489816 NIPBLQ6KC79 2804 aaeCLIP11.9□□□□□ -0.5
BRD9-208ENST00000489816 PPBPP02775 128 aa11.89□□□□□ -0.51
BRD9-208ENST00000489816 TMEM8BA6NDV4 472 aa11.89□□□□□ -0.51
BRD9-208ENST00000489816 ODF1Q14990 250 aa11.89□□□□□ -0.51
BRD9-208ENST00000489816 ZC2HC1BQ5TFG8 222 aa11.89□□□□□ -0.51
BRD9-208ENST00000489816 PRRC2AP48634 2157 aaKnown RBP11.89□□□□□ -0.51
BRD9-208ENST00000489816 C19orf54Q5BKX5 351 aa11.89□□□□□ -0.51
BRD9-208ENST00000489816 ARL6IP6Q8N6S5 226 aa11.89□□□□□ -0.51
BRD9-208ENST00000489816 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
BRD9-208ENST00000489816 MRPL35Q9NZE8 188 aaKnown RBP11.89□□□□□ -0.51
BRD9-208ENST00000489816 IGHG2P01859 326 aa11.88□□□□□ -0.51
BRD9-208ENST00000489816 C9orf139Q6ZV77 190 aa11.88□□□□□ -0.51
BRD9-208ENST00000489816 NRACQ8N912 160 aa11.88□□□□□ -0.51
BRD9-208ENST00000489816 JMJD1CQ15652 2540 aa11.88□□□□□ -0.51
BRD9-208ENST00000489816 TRAV12-2A0A075B6T6 113 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 H3BUT2 72 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 ZNF688P0C7X2 276 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 A6NDX4 124 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 GCSHP23434 173 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 MEGF9Q9H1U4 602 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 NDUFA4O00483 81 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 TGFAP01135 160 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 BOD1L2Q8IYS8 172 aa11.87□□□□□ -0.51
BRD9-208ENST00000489816 TRAV12-3A0A0B4J271 114 aa11.86□□□□□ -0.51
BRD9-208ENST00000489816 Q8N8P6 123 aa11.86□□□□□ -0.51
BRD9-208ENST00000489816 TMEM190Q8WZ59 177 aa11.86□□□□□ -0.51
BRD9-208ENST00000489816 HHLA3Q9XRX5 114 aa11.86□□□□□ -0.51
BRD9-208ENST00000489816 ZNF469Q96JG9 3925 aaPredicted RBP11.86□□□□□ -0.51
BRD9-208ENST00000489816 IGLV2-18A0A075B6J9 118 aa11.86□□□□□ -0.51
BRD9-208ENST00000489816 A0A087WWL8 130 aa11.86□□□□□ -0.51
BRD9-208ENST00000489816 HTN1P15515 57 aa11.86□□□□□ -0.51
BRD9-208ENST00000489816 MYOZ3Q8TDC0 251 aa11.86□□□□□ -0.51
BRD9-208ENST00000489816 EMP1P54849 157 aa11.85□□□□□ -0.51
BRD9-208ENST00000489816 LAGE3Q14657 143 aa11.85□□□□□ -0.51
BRD9-208ENST00000489816 IGKCP01834 107 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms