RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 USP54Q70EL1 1684 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 NCOA2Q15596 1464 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 IGKV1D-42A0A075B6H8 117 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 IGHV1-18A0A0C4DH31 117 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 A0A1B0GU33 70 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 H3BQ15 152 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 SSSCA1O60232 199 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 GNGT1P63211 74 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 DCDP81605 110 aaKnown RBP2.16□□□□□ -2.06
KDM3A-213ENST00000488971 SPANXN5Q5MJ07 72 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 ZNF720Q7Z2F6 126 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 Q8NAQ8 132 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 MUCL1Q96DR8 90 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 C14orf132Q9NPU4 83 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 MINOS1-NBL1R4GNA1 71 aa2.16□□□□□ -2.06
KDM3A-213ENST00000488971 HELZP42694 1942 aaKnown RBP2.16□□□□□ -2.06
KDM3A-213ENST00000488971 PXDNLA1KZ92 1463 aa2.15□□□□□ -2.06
KDM3A-213ENST00000488971 PIGBOS1A0A0B4J2F0 54 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 UBE2L5PA0A1B0GUS4 154 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 RBAKDNA6NC62 111 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 E7EQL1 145 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 K7EP34 96 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 PROSCO94903 275 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 UBL3O95164 117 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 PIRTP0C851 137 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 ROMO1P60602 79 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 UBE2L3P68036 154 aaKnown RBP2.15□□□□□ -2.07
KDM3A-213ENST00000488971 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 SPRNQ5BIV9 151 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 C1orf134Q5TEV5 83 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 OR8B2Q96RD0 313 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 S100A13Q99584 98 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 NPVFQ9HCQ7 196 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 PLXNA3P51805 1871 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 TOP2AP11388 1531 aaKnown RBP2.15□□□□□ -2.07
KDM3A-213ENST00000488971 ROBO1Q9Y6N7 1651 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 LCTP09848 1927 aa2.15□□□□□ -2.07
KDM3A-213ENST00000488971 KIF20BQ96Q89 1820 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 LMTK2Q8IWU2 1503 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 TRAV14DV4A0A0A6YYC5 116 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 TRAV1-1A0A0B4J248 108 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 B4DSR2 109 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 C5orf67F2Z3F1 127 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 GNGT2O14610 69 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 GYPAP02724 150 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 ASIPP42127 132 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 INSL4Q14641 139 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 SPANXN1Q5VSR9 72 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 UNQ5815/PRO19632Q6UWF5 114 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 CASC2Q6XLA1 102 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 C5orf38Q86SI9 138 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 LYPD6Q86Y78 171 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 SBSPONQ8IVN8 264 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 Q8N8P6 123 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 C10orf82Q8WW14 230 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 LINC00052Q96N35 136 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 PMCHL2Q9BQD1 86 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 CXCL16Q9H2A7 254 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 DPH3P1Q9H4G8 78 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 ZSWIM8A7E2V4 1837 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 SHROOM3Q8TF72 1996 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 ERVK-7P63135 1459 aa2.14□□□□□ -2.07
KDM3A-213ENST00000488971 SMARCA4P51532 1647 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 COL4A4P53420 1690 aaPredicted RBP2.13□□□□□ -2.07
KDM3A-213ENST00000488971 MCM3APO60318 1980 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 IGHV3-64A0A075B6Q5 118 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 MRPS14O60783 128 aaKnown RBP2.13□□□□□ -2.07
KDM3A-213ENST00000488971 CYB5AP00167 134 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 TRAPPC2P0DI81 140 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 TRAPPC2BP0DI82 140 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 HRES1P13985 223 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 ADCYAP1P18509 176 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 S100A7L2Q5SY68 101 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 SLC25A26Q70HW3 274 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 ARPINQ7Z6K5 226 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 FAM19A2Q8N3H0 131 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 TMEM254Q8TBM7 123 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 DYNLRB2Q8TF09 96 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 ABCC5O15440 1437 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 C10orf71Q711Q0 1435 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 LRRIQ1Q96JM4 1722 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 HEATR5AQ86XA9 2040 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 TRPM6Q9BX84 2022 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 FANCD2Q9BXW9 1451 aa2.13□□□□□ -2.07
KDM3A-213ENST00000488971 PARP14Q460N5 1801 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 SLX4Q8IY92 1834 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 KIF21AQ7Z4S6 1674 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 TOPAZ1Q8N9V7 1692 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.12□□□□□ -2.07
KDM3A-213ENST00000488971 MARF1Q9Y4F3 1742 aaKnown RBP2.12□□□□□ -2.07
KDM3A-213ENST00000488971 HFM1A2PYH4 1435 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 A0A0J9YX75 114 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 HMSDA8MTL9 139 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 F8W1H4 67 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 BAALC-AS2P0C853 105 aa2.12□□□□□ -2.07
KDM3A-213ENST00000488971 POLR2JP52435 117 aaKnown RBP2.12□□□□□ -2.07
KDM3A-213ENST00000488971 DSCR4P56555 118 aaPredicted RBP2.12□□□□□ -2.07
KDM3A-213ENST00000488971 RPL26P61254 145 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 1126.4 ms