RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 LPAP08519 4548 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 TRAV21A0A0B4J279 112 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 UBE2L5PA0A1B0GUS4 154 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 GAS8-AS1O95177 125 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 TYMSP04818 313 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 INPP1P49441 399 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 BCAP31P51572 246 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 ARL16Q0P5N6 197 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 Q0VG73 95 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 IAH1Q2TAA2 248 aaPredicted RBP4.94□□□□□ -1.62
PDPN-205ENST00000487038 ZNF876PQ49A33 203 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 CFAP126Q5VTH2 177 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 UBE2WQ96B02 151 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 ZC2HC1AQ96GY0 325 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 CHCHD7Q9BUK0 85 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 C1orf43Q9BWL3 253 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 WDR83OSQ9Y284 106 aa4.94□□□□□ -1.62
PDPN-205ENST00000487038 A0A087WX48 190 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 IGHV3-73A0A0B4J1V6 119 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 C9orf170A2RU37 121 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 C7orf66A4D0T2 115 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 GNRH2O43555 120 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 CRPP02741 224 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 NBEAP1P0C6P0 100 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 CAV2P51636 162 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 DGAT2L7PQ6IED9 249 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 NIT1Q86X76 327 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 CYB561D1Q8N8Q1 229 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 TMED6Q8WW62 240 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 ASB13Q8WXK3 278 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 SLC25A2Q9BXI2 301 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 NAA50Q9GZZ1 169 aaKnown RBP4.93□□□□□ -1.62
PDPN-205ENST00000487038 KLK12Q9UKR0 248 aa4.93□□□□□ -1.62
PDPN-205ENST00000487038 PGPA6NDG6 321 aa4.92□□□□□ -1.62
PDPN-205ENST00000487038 PVALBP20472 110 aaPredicted RBP4.92□□□□□ -1.62
PDPN-205ENST00000487038 FGF7P21781 194 aa4.92□□□□□ -1.62
PDPN-205ENST00000487038 FGF8P55075 233 aaPredicted RBP4.92□□□□□ -1.62
PDPN-205ENST00000487038 HBG1P69891 147 aa4.92□□□□□ -1.62
PDPN-205ENST00000487038 HBG2P69892 147 aa4.92□□□□□ -1.62
PDPN-205ENST00000487038 ATRAIDQ6UW56 229 aa4.92□□□□□ -1.62
PDPN-205ENST00000487038 STX12Q86Y82 276 aa4.92□□□□□ -1.62
PDPN-205ENST00000487038 GSKIPQ9P0R6 139 aa4.92□□□□□ -1.62
PDPN-205ENST00000487038 GAGE12JA6NER3 117 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 OR7C2O60412 319 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 CST7O76096 145 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 HLA-DQA1P01909 254 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 S100A11P31949 105 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 RPL19P84098 196 aaKnown RBP4.91□□□□□ -1.62
PDPN-205ENST00000487038 GAGE1Q13065 139 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 GAGE4Q13068 117 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 GAGE5Q13069 117 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 GAGE13Q4V321 117 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 FAM74A1Q5RGS3 127 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 C9orf163Q8N9P6 203 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 CHAC2Q8WUX2 184 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 TRIM63Q969Q1 353 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 PHYHIPLQ96FC7 376 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 LINC01600Q96MT4 127 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 KCNIP2Q9NS61 270 aa4.91□□□□□ -1.62
PDPN-205ENST00000487038 LSM5Q9Y4Y9 91 aaKnown RBP4.91□□□□□ -1.62
PDPN-205ENST00000487038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
PDPN-205ENST00000487038 A0A0U1RQV1 116 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 A8MWV9 139 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 USP17L23D6RBM5 183 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 MBPP02686 304 aaPredicted RBP4.9□□□□□ -1.63
PDPN-205ENST00000487038 LINC00694P0DN24 101 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 SULT1A1P50225 295 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 RANP62826 216 aaKnown RBP4.9□□□□□ -1.63
PDPN-205ENST00000487038 UBE2L3P68036 154 aaKnown RBP4.9□□□□□ -1.63
PDPN-205ENST00000487038 ATP6V1FQ16864 119 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 PYDC2Q56P42 97 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 SPANXN2Q5MJ10 180 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 ZFP2Q6ZN57 461 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 MIR17HGQ75NE6 70 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 CMTM2Q8TAZ6 248 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 C7orf33Q8WU49 177 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 FXYD5Q96DB9 178 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 DNAJC30Q96LL9 226 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 NDFIP1Q9BT67 221 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 NPCDR1Q9BY65 106 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 MRPS26Q9BYN8 205 aaKnown RBP4.9□□□□□ -1.63
PDPN-205ENST00000487038 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 TREM1Q9NP99 234 aa4.9□□□□□ -1.63
PDPN-205ENST00000487038 MUC2Q02817 5179 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 F6UZH7 168 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 SMIM18P0DKX4 95 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 SPCS2Q15005 226 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 GCSAMLQ5JQS6 135 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 ZNF506Q5JVG8 444 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 DMRTA1Q5VZB9 504 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 DPPA3Q6W0C5 159 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 PTH2Q96A98 100 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 DPH3Q96FX2 82 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 RNF185Q96GF1 192 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 FAM167A-AS1Q96KT0 104 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 NMES1Q9C002 83 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 PARLQ9H300 379 aa4.89□□□□□ -1.63
PDPN-205ENST00000487038 LYRM2Q9NU23 88 aaPredicted RBP4.89□□□□□ -1.63
PDPN-205ENST00000487038 A0A0J9YXV3 536 aa4.88□□□□□ -1.63
PDPN-205ENST00000487038 NAP1L6A6NFF2 107 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms