RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TRAV25A0A0B4J276 109 aa19.65■□□□□ 0.74
SHOX2-204ENST00000483851 TFPI2P48307 235 aa19.65■□□□□ 0.74
SHOX2-204ENST00000483851 A0A1B0GUT8 65 aa19.65■□□□□ 0.74
SHOX2-204ENST00000483851 ZNF688P0C7X2 276 aa19.65■□□□□ 0.74
SHOX2-204ENST00000483851 PMCHP20382 165 aa19.65■□□□□ 0.74
SHOX2-204ENST00000483851 DEFB114Q30KQ6 69 aa19.65■□□□□ 0.74
SHOX2-204ENST00000483851 PSMG4Q5JS54 123 aa19.65■□□□□ 0.74
SHOX2-204ENST00000483851 ZFAND2AQ8N6M9 145 aa19.65■□□□□ 0.74
SHOX2-204ENST00000483851 ORM1P02763 201 aa19.64■□□□□ 0.73
SHOX2-204ENST00000483851 RIGQ13278 110 aa19.64■□□□□ 0.73
SHOX2-204ENST00000483851 BORCS7Q96B45 105 aa19.64■□□□□ 0.73
SHOX2-204ENST00000483851 URB1-AS1Q96HZ7 61 aa19.64■□□□□ 0.73
SHOX2-204ENST00000483851 F6UB75 175 aa19.63■□□□□ 0.73
SHOX2-204ENST00000483851 LOC102724200A0A096LPH7 203 aaPredicted RBP19.62■□□□□ 0.73
SHOX2-204ENST00000483851 EBLN2Q6P2I7 272 aa19.62■□□□□ 0.73
SHOX2-204ENST00000483851 NDUFA11Q86Y39 141 aa19.62■□□□□ 0.73
SHOX2-204ENST00000483851 NDUFAF3Q9BU61 184 aa19.62■□□□□ 0.73
SHOX2-204ENST00000483851 A0A0J9YX75 114 aa19.62■□□□□ 0.73
SHOX2-204ENST00000483851 ADARB2-AS1A8MUL3 147 aa19.62■□□□□ 0.73
SHOX2-204ENST00000483851 FAM19A2Q8N3H0 131 aa19.62■□□□□ 0.73
SHOX2-204ENST00000483851 FN1P02751 2386 aaKnown RBP19.61■□□□□ 0.73
SHOX2-204ENST00000483851 DUSP14O95147 198 aaKnown RBP19.61■□□□□ 0.73
SHOX2-204ENST00000483851 ARMS2P0C7Q2 107 aa19.61■□□□□ 0.73
SHOX2-204ENST00000483851 PRR31Q5SQ13 230 aa19.61■□□□□ 0.73
SHOX2-204ENST00000483851 HIST2H2BDQ6DRA6 164 aa19.61■□□□□ 0.73
SHOX2-204ENST00000483851 FOXI2Q6ZQN5 318 aa19.61■□□□□ 0.73
SHOX2-204ENST00000483851 TMEM61Q8N0U2 210 aa19.61■□□□□ 0.73
SHOX2-204ENST00000483851 TRAV21A0A0B4J279 112 aa19.6■□□□□ 0.73
SHOX2-204ENST00000483851 IGLC6P0CF74 106 aa19.6■□□□□ 0.73
SHOX2-204ENST00000483851 DEFB1P60022 68 aa19.6■□□□□ 0.73
SHOX2-204ENST00000483851 SPAG8Q99932 426 aaPredicted RBP19.6■□□□□ 0.73
SHOX2-204ENST00000483851 CUBNO60494 3623 aa19.6■□□□□ 0.73
SHOX2-204ENST00000483851 CTRLP40313 264 aa19.6■□□□□ 0.73
SHOX2-204ENST00000483851 TDRG1Q3Y452 100 aa19.6■□□□□ 0.73
SHOX2-204ENST00000483851 ZNF575Q86XF7 245 aa19.59■□□□□ 0.73
SHOX2-204ENST00000483851 FER1L6-AS1Q8NA97 138 aa19.59■□□□□ 0.73
SHOX2-204ENST00000483851 TMSB15BA0A087X1C1 80 aa19.58■□□□□ 0.73
SHOX2-204ENST00000483851 KRTDAPP60985 99 aa19.58■□□□□ 0.73
SHOX2-204ENST00000483851 C20orf144Q9BQM9 153 aa19.58■□□□□ 0.73
SHOX2-204ENST00000483851 IGKV3D-20A0A0C4DH25 116 aa19.58■□□□□ 0.72
SHOX2-204ENST00000483851 OR4C46A6NHA9 309 aa19.58■□□□□ 0.72
SHOX2-204ENST00000483851 KLLNB2CW77 178 aa19.58■□□□□ 0.72
SHOX2-204ENST00000483851 C3orf79P0CE67 100 aa19.58■□□□□ 0.72
SHOX2-204ENST00000483851 HSBP1O75506 76 aa19.57■□□□□ 0.72
SHOX2-204ENST00000483851 LEPP41159 167 aa19.57■□□□□ 0.72
SHOX2-204ENST00000483851 PRR9Q5T870 116 aa19.57■□□□□ 0.72
SHOX2-204ENST00000483851 LYZL1Q6UWQ5 148 aa19.57■□□□□ 0.72
SHOX2-204ENST00000483851 CNFNQ9BYD5 112 aa19.57■□□□□ 0.72
SHOX2-204ENST00000483851 ZNF493Q6ZR52 646 aa19.56■□□□□ 0.72
SHOX2-204ENST00000483851 C11orf21Q9P2W6 132 aa19.56■□□□□ 0.72
SHOX2-204ENST00000483851 NTF3P20783 257 aa19.56■□□□□ 0.72
SHOX2-204ENST00000483851 CD300EQ496F6 205 aaPredicted RBP19.56■□□□□ 0.72
SHOX2-204ENST00000483851 DMRTA1Q5VZB9 504 aa19.56■□□□□ 0.72
SHOX2-204ENST00000483851 RNASEKQ6P5S7 137 aaKnown RBP19.55■□□□□ 0.72
SHOX2-204ENST00000483851 CHCHD1Q96BP2 118 aaKnown RBP19.55■□□□□ 0.72
SHOX2-204ENST00000483851 TSPOP30536 169 aa19.54■□□□□ 0.72
SHOX2-204ENST00000483851 LURAP1LQ8IV03 231 aa19.54■□□□□ 0.72
SHOX2-204ENST00000483851 TPPP3Q9BW30 176 aa19.54■□□□□ 0.72
SHOX2-204ENST00000483851 KRTAP10-3P60369 221 aa19.53■□□□□ 0.72
SHOX2-204ENST00000483851 NSUN5P1Q3KNT7 163 aa19.53■□□□□ 0.72
SHOX2-204ENST00000483851 A8MTW9 85 aa19.52■□□□□ 0.72
SHOX2-204ENST00000483851 M0R2Z0 102 aa19.52■□□□□ 0.72
SHOX2-204ENST00000483851 CYSRT1A8MQ03 144 aa19.52■□□□□ 0.71
SHOX2-204ENST00000483851 RNASE4P34096 147 aaKnown RBP19.52■□□□□ 0.71
SHOX2-204ENST00000483851 OR2K2Q8NGT1 345 aa19.52■□□□□ 0.71
SHOX2-204ENST00000483851 ZNF256Q9Y2P7 627 aaPredicted RBP19.52■□□□□ 0.71
SHOX2-204ENST00000483851 DEFB131AP59861 70 aa19.51■□□□□ 0.71
SHOX2-204ENST00000483851 VAMP8Q9BV40 100 aa19.51■□□□□ 0.71
SHOX2-204ENST00000483851 OR5AL1P0C617 328 aa19.5■□□□□ 0.71
SHOX2-204ENST00000483851 HLA-DRB4P13762 266 aa19.5■□□□□ 0.71
SHOX2-204ENST00000483851 HLA-DRB4X5D2U9 266 aa19.5■□□□□ 0.71
SHOX2-204ENST00000483851 CDKN1BP46527 198 aa19.49■□□□□ 0.71
SHOX2-204ENST00000483851 MAP6D1Q9H9H5 199 aa19.49■□□□□ 0.71
SHOX2-204ENST00000483851 SETD2Q9BYW2 2564 aaPredicted RBP19.49■□□□□ 0.71
SHOX2-204ENST00000483851 C2CD3Q4AC94 2353 aa19.49■□□□□ 0.71
SHOX2-204ENST00000483851 J3KRW8 73 aa19.48■□□□□ 0.71
SHOX2-204ENST00000483851 SNAI2O43623 268 aa19.48■□□□□ 0.71
SHOX2-204ENST00000483851 LINC00614P0C842 121 aa19.48■□□□□ 0.71
SHOX2-204ENST00000483851 MED14OSP0DP75 135 aa19.48■□□□□ 0.71
SHOX2-204ENST00000483851 CMC4P56277 68 aaPredicted RBP19.48■□□□□ 0.71
SHOX2-204ENST00000483851 C7orf71A4D174 169 aa19.48■□□□□ 0.71
SHOX2-204ENST00000483851 PAM16Q9Y3D7 125 aa19.48■□□□□ 0.71
SHOX2-204ENST00000483851 U3KQK5 164 aa19.48■□□□□ 0.71
SHOX2-204ENST00000483851 LBHQ53QV2 105 aaPredicted RBP19.47■□□□□ 0.71
SHOX2-204ENST00000483851 AMTNQ6UX39 209 aa19.47■□□□□ 0.71
SHOX2-204ENST00000483851 CLUHP3Q96NS8 147 aa19.47■□□□□ 0.71
SHOX2-204ENST00000483851 F8P00451 2351 aa19.47■□□□□ 0.71
SHOX2-204ENST00000483851 IGHV1-24A0A0C4DH33 117 aa19.46■□□□□ 0.71
SHOX2-204ENST00000483851 CACNG7P62955 275 aa19.46■□□□□ 0.71
SHOX2-204ENST00000483851 Q6ZQT7 251 aa19.46■□□□□ 0.71
SHOX2-204ENST00000483851 MIEN1Q9BRT3 115 aa19.46■□□□□ 0.71
SHOX2-204ENST00000483851 C2orf88Q9BSF0 95 aa19.46■□□□□ 0.71
SHOX2-204ENST00000483851 IGHV4-4A0A075B6R2 117 aa19.45■□□□□ 0.7
SHOX2-204ENST00000483851 H3BMM0 161 aa19.45■□□□□ 0.7
SHOX2-204ENST00000483851 SAP30O75446 220 aa19.45■□□□□ 0.7
SHOX2-204ENST00000483851 IGLV1-51P01701 117 aa19.45■□□□□ 0.7
SHOX2-204ENST00000483851 RAB4AP20338 218 aa19.45■□□□□ 0.7
SHOX2-204ENST00000483851 FAM104BQ5XKR9 115 aa19.45■□□□□ 0.7
SHOX2-204ENST00000483851 BTF3P20290 206 aaKnown RBP19.45■□□□□ 0.7
SHOX2-204ENST00000483851 KIR3DS1Q14943 382 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms