RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 NEU1Q99519 415 aa9.51□□□□□ -0.89
HDAC1-208ENST00000482310 MLST8Q9BVC4 326 aa9.51□□□□□ -0.89
HDAC1-208ENST00000482310 SDF2L1Q9HCN8 221 aa9.51□□□□□ -0.89
HDAC1-208ENST00000482310 B4DEV8 164 aa9.5□□□□□ -0.89
HDAC1-208ENST00000482310 C9JCJ5 164 aa9.5□□□□□ -0.89
HDAC1-208ENST00000482310 K7EN84 100 aa9.5□□□□□ -0.89
HDAC1-208ENST00000482310 RNASE8Q8TDE3 154 aaKnown RBP9.5□□□□□ -0.89
HDAC1-208ENST00000482310 NOP10Q9NPE3 64 aaKnown RBP9.5□□□□□ -0.89
HDAC1-208ENST00000482310 GSN-AS1Q9NRJ2 163 aa9.5□□□□□ -0.89
HDAC1-208ENST00000482310 MUC4Q99102 2169 aa9.5□□□□□ -0.89
HDAC1-208ENST00000482310 STAB2Q8WWQ8 2551 aa9.49□□□□□ -0.89
HDAC1-208ENST00000482310 TRGV11A0A075B6L2 103 aa9.49□□□□□ -0.89
HDAC1-208ENST00000482310 GRIFINA4D1Z8 144 aa9.49□□□□□ -0.89
HDAC1-208ENST00000482310 SNURFLB1AK76 121 aa9.49□□□□□ -0.89
HDAC1-208ENST00000482310 ZNF415Q09FC8 603 aa9.49□□□□□ -0.89
HDAC1-208ENST00000482310 SOHLH1Q5JUK2 328 aa9.49□□□□□ -0.89
HDAC1-208ENST00000482310 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
HDAC1-208ENST00000482310 DAZAP1Q96EP5 407 aaKnown RBP9.49□□□□□ -0.89
HDAC1-208ENST00000482310 C11orf68Q9H3H3 251 aaKnown RBP9.49□□□□□ -0.89
HDAC1-208ENST00000482310 MDFICQ9P1T7 246 aa9.49□□□□□ -0.89
HDAC1-208ENST00000482310 IGKV3D-20A0A0C4DH25 116 aa9.48□□□□□ -0.89
HDAC1-208ENST00000482310 PLAC8L1A1L4L8 177 aa9.48□□□□□ -0.89
HDAC1-208ENST00000482310 NANOS2P60321 138 aaKnown RBP9.48□□□□□ -0.89
HDAC1-208ENST00000482310 ADIRFQ15847 76 aa9.48□□□□□ -0.89
HDAC1-208ENST00000482310 COX8CQ7Z4L0 72 aa9.48□□□□□ -0.89
HDAC1-208ENST00000482310 KCNS1Q96KK3 526 aa9.48□□□□□ -0.89
HDAC1-208ENST00000482310 RNASE7Q9H1E1 156 aaKnown RBP9.48□□□□□ -0.89
HDAC1-208ENST00000482310 SMDT1Q9H4I9 107 aa9.48□□□□□ -0.89
HDAC1-208ENST00000482310 IGHV3-16A0A0C4DH30 117 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 TMEM189A5PLL7 270 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 CXorf65A6NEN9 183 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 KRBOX1C9JBD0 128 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 H3BVH4 76 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 NDUFS6O75380 124 aaKnown RBP9.47□□□□□ -0.89
HDAC1-208ENST00000482310 S100A4P26447 101 aaKnown RBP9.47□□□□□ -0.89
HDAC1-208ENST00000482310 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 LINC00467Q9BRT7 94 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 EDA2RQ9HAV5 297 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 MRPL16Q9NX20 251 aaKnown RBP9.47□□□□□ -0.89
HDAC1-208ENST00000482310 NACAE9PAV3 2078 aa9.47□□□□□ -0.89
HDAC1-208ENST00000482310 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.89
HDAC1-208ENST00000482310 P01737 135 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 DEFB130BP0DP73 79 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 DEFB130AP0DP74 79 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 GZMBP10144 247 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 ASIPP42127 132 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 TCL1AP56279 114 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 TMEM241Q24JQ0 296 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 TDRG1Q3Y452 100 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 FAM74A3Q4VXF1 159 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 ZNF493Q6ZR52 646 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 LINC01551Q86U37 167 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 OR2D3Q8NGH3 330 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 C11orf45Q8TAV5 145 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 SMIM12Q96EX1 92 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 DKK2Q9UBU2 259 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 NAT8Q9UHE5 227 aa9.46□□□□□ -0.9
HDAC1-208ENST00000482310 TRGV1A0A0A0MS02 117 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 GAGE12BA1L429 117 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 C19orf71A6NCJ1 209 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 GAGE7O76087 117 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 GAGE12FP0CL80 117 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 GAGE12GP0CL81 117 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 GAGE12IP0CL82 117 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 HTN3P15516 51 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 ERVFC1-1P60608 527 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 SSTP61278 116 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 RPL23P62829 140 aaKnown RBP9.45□□□□□ -0.9
HDAC1-208ENST00000482310 LINC01559Q495D7 138 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 IBA57Q5T440 356 aaKnown RBP9.45□□□□□ -0.9
HDAC1-208ENST00000482310 UQCC3Q6UW78 93 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 Q6ZTI0 123 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 NUDT10Q8NFP7 164 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 IL17DQ8TAD2 202 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 NUDT11Q96G61 164 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 BIN3Q9NQY0 253 aa9.45□□□□□ -0.9
HDAC1-208ENST00000482310 MUC21A0A0G2JKD1 596 aa9.44□□□□□ -0.9
HDAC1-208ENST00000482310 MUC21A0A140T8X8 626 aa9.44□□□□□ -0.9
HDAC1-208ENST00000482310 F8W036 122 aa9.44□□□□□ -0.9
HDAC1-208ENST00000482310 DAD1P61803 113 aa9.44□□□□□ -0.9
HDAC1-208ENST00000482310 TPPP3Q9BW30 176 aa9.44□□□□□ -0.9
HDAC1-208ENST00000482310 GATCO43716 136 aaKnown RBP9.43□□□□□ -0.9
HDAC1-208ENST00000482310 RNASE3P12724 160 aaKnown RBP9.43□□□□□ -0.9
HDAC1-208ENST00000482310 ADCYAP1P18509 176 aa9.43□□□□□ -0.9
HDAC1-208ENST00000482310 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
HDAC1-208ENST00000482310 Q6ZTC4 211 aa9.43□□□□□ -0.9
HDAC1-208ENST00000482310 ISOC2Q96AB3 205 aa9.43□□□□□ -0.9
HDAC1-208ENST00000482310 RPP21Q9H633 154 aaKnown RBP9.43□□□□□ -0.9
HDAC1-208ENST00000482310 LY96Q9Y6Y9 160 aa9.43□□□□□ -0.9
HDAC1-208ENST00000482310 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
HDAC1-208ENST00000482310 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
HDAC1-208ENST00000482310 IGHV3-53P01767 116 aa9.42□□□□□ -0.9
HDAC1-208ENST00000482310 ARMS2P0C7Q2 107 aa9.42□□□□□ -0.9
HDAC1-208ENST00000482310 C12orf74Q32Q52 190 aa9.42□□□□□ -0.9
HDAC1-208ENST00000482310 SLC7A5P1Q8MH63 180 aa9.42□□□□□ -0.9
HDAC1-208ENST00000482310 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
HDAC1-208ENST00000482310 TRGV2A0A075B6R0 118 aa9.41□□□□□ -0.9
HDAC1-208ENST00000482310 DAZ2Q13117 558 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms