RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
PHF3-204ENST00000481385 LINC01546A6NGU7 62 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 PPBPP02775 128 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 IGLV2-18A0A075B6J9 118 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 A0A096LNT2 108 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 NUDT3O95989 172 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 LEPP41159 167 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 LGALS9CQ6DKI2 356 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 C2orf91Q6ZV80 131 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 DKK2Q9UBU2 259 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 ABCA12Q86UK0 2595 aa10.63□□□□□ -0.71
PHF3-204ENST00000481385 NRACQ8N912 160 aa10.62□□□□□ -0.71
PHF3-204ENST00000481385 BBC3Q96PG8 261 aaPredicted RBP10.62□□□□□ -0.71
PHF3-204ENST00000481385 COX8AP10176 69 aa10.62□□□□□ -0.71
PHF3-204ENST00000481385 FGF6P10767 208 aa10.62□□□□□ -0.71
PHF3-204ENST00000481385 SPANXN1Q5VSR9 72 aa10.62□□□□□ -0.71
PHF3-204ENST00000481385 PTPN13Q12923 2485 aa10.62□□□□□ -0.71
PHF3-204ENST00000481385 BVES-AS1Q5T3Y7 98 aa10.61□□□□□ -0.71
PHF3-204ENST00000481385 OR2K2Q8NGT1 345 aa10.61□□□□□ -0.71
PHF3-204ENST00000481385 FAM19A4Q96LR4 140 aa10.61□□□□□ -0.71
PHF3-204ENST00000481385 AKAP9Q99996 3911 aa10.61□□□□□ -0.71
PHF3-204ENST00000481385 ERASQ7Z444 233 aa10.61□□□□□ -0.71
PHF3-204ENST00000481385 OR10J6PQ8NGY7 276 aa10.61□□□□□ -0.71
PHF3-204ENST00000481385 LINC00477Q96M19 166 aa10.61□□□□□ -0.71
PHF3-204ENST00000481385 IGHV4-4A0A075B6R2 117 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 TMEM8BA6NDV4 472 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 DAZ1Q9NQZ3 744 aaKnown RBP10.6□□□□□ -0.71
PHF3-204ENST00000481385 COX11Q9Y6N1 276 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 PSMB8P28062 276 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 SRSF1Q07955 248 aaKnown RBP eCLIP10.6□□□□□ -0.71
PHF3-204ENST00000481385 TMEM158Q8WZ71 300 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 LENEPQ9Y5L5 61 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 TEX15Q9BXT5 2789 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 OVOL1O14753 267 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 FCER1GP30273 86 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 RNASE4P34096 147 aaKnown RBP10.6□□□□□ -0.71
PHF3-204ENST00000481385 ANXA2RQ3ZCQ2 193 aa10.6□□□□□ -0.71
PHF3-204ENST00000481385 NXT2Q9NPJ8 142 aaKnown RBP10.6□□□□□ -0.71
PHF3-204ENST00000481385 A0A0G2JLM5 398 aa10.59□□□□□ -0.71
PHF3-204ENST00000481385 A1L4Q6 167 aa10.59□□□□□ -0.71
PHF3-204ENST00000481385 M0R381 172 aa10.59□□□□□ -0.71
PHF3-204ENST00000481385 Q8N8P6 123 aa10.59□□□□□ -0.71
PHF3-204ENST00000481385 WFDC12Q8WWY7 111 aa10.59□□□□□ -0.71
PHF3-204ENST00000481385 PEF1Q9UBV8 284 aaKnown RBP10.59□□□□□ -0.71
PHF3-204ENST00000481385 SMPXQ9UHP9 88 aa10.59□□□□□ -0.71
PHF3-204ENST00000481385 GNRH2O43555 120 aa10.59□□□□□ -0.71
PHF3-204ENST00000481385 CUBNO60494 3623 aa10.59□□□□□ -0.71
PHF3-204ENST00000481385 CD5LO43866 347 aa10.58□□□□□ -0.72
PHF3-204ENST00000481385 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
PHF3-204ENST00000481385 ORAOV1Q8WV07 137 aa10.58□□□□□ -0.72
PHF3-204ENST00000481385 DOPEY2Q9Y3R5 2298 aa10.58□□□□□ -0.72
PHF3-204ENST00000481385 TRAV21A0A0B4J279 112 aa10.58□□□□□ -0.72
PHF3-204ENST00000481385 TAX1BP3O14907 124 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 CCL25O15444 150 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 TGFAP01135 160 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 KRTAP10-9P60411 292 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 DCANP1Q8TF63 244 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 SLC25A16P16260 332 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 GATA3P23771 443 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 DSCR9P59020 149 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 ODF1Q14990 250 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 SMIM15Q7Z3B0 74 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 PCP2Q8IVA1 136 aa10.57□□□□□ -0.72
PHF3-204ENST00000481385 RNASE3P12724 160 aaKnown RBP10.56□□□□□ -0.72
PHF3-204ENST00000481385 APRG1Q8IVJ8 170 aa10.56□□□□□ -0.72
PHF3-204ENST00000481385 NAV2Q8IVL1 2488 aa10.56□□□□□ -0.72
PHF3-204ENST00000481385 RNF223E7ERA6 249 aa10.55□□□□□ -0.72
PHF3-204ENST00000481385 BOD1L2Q8IYS8 172 aa10.55□□□□□ -0.72
PHF3-204ENST00000481385 C14orf178Q8N769 122 aaPredicted RBP10.55□□□□□ -0.72
PHF3-204ENST00000481385 DPF1Q92782 380 aa10.55□□□□□ -0.72
PHF3-204ENST00000481385 PRSS47A8MTI9 375 aa10.55□□□□□ -0.72
PHF3-204ENST00000481385 SMIM17P0DL12 118 aa10.55□□□□□ -0.72
PHF3-204ENST00000481385 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
PHF3-204ENST00000481385 ASIPP42127 132 aa10.55□□□□□ -0.72
PHF3-204ENST00000481385 RPL39LQ96EH5 51 aaKnown RBP10.55□□□□□ -0.72
PHF3-204ENST00000481385 HHLA3Q9XRX5 114 aa10.55□□□□□ -0.72
PHF3-204ENST00000481385 EPG5Q9HCE0 2579 aa10.55□□□□□ -0.72
PHF3-204ENST00000481385 IGKV2D-26A0A0A0MRZ7 120 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 C12orf54Q6X4T0 127 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 RASL10AQ92737 203 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 ZMAT4Q9H898 229 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 PRSS1P07477 247 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 NMUP48645 174 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 LAGE3Q14657 143 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 OR1N2Q8NGR9 330 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 FOXC2Q99958 501 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 APCP25054 2843 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 MUC4Q99102 2169 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 K7EMT4 169 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 ZNF580Q9UK33 172 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
PHF3-204ENST00000481385 KLLNB2CW77 178 aa10.53□□□□□ -0.72
PHF3-204ENST00000481385 DUX5Q96PT3 197 aa10.53□□□□□ -0.72
PHF3-204ENST00000481385 COX6B1P14854 86 aa10.52□□□□□ -0.73
PHF3-204ENST00000481385 MRAP2Q96G30 205 aa10.52□□□□□ -0.73
PHF3-204ENST00000481385 CBY3A6NI87 242 aa10.52□□□□□ -0.73
PHF3-204ENST00000481385 ZNF688P0C7X2 276 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms