RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 PRR27Q6MZM9 219 aa10.41□□□□□ -0.74
USP11-207ENST00000478596 ZFP30Q9Y2G7 519 aa10.41□□□□□ -0.74
USP11-207ENST00000478596 TRBV7-9A0A0J9YWB2 115 aa10.4□□□□□ -0.74
USP11-207ENST00000478596 ZNF727A8MUV8 499 aa10.4□□□□□ -0.74
USP11-207ENST00000478596 LTAP01374 205 aa10.4□□□□□ -0.74
USP11-207ENST00000478596 IGLV2-11P01706 119 aa10.4□□□□□ -0.74
USP11-207ENST00000478596 HTN1P15515 57 aa10.4□□□□□ -0.74
USP11-207ENST00000478596 CRISP2P16562 243 aa10.4□□□□□ -0.74
USP11-207ENST00000478596 SRSF3P84103 164 aaKnown RBP10.4□□□□□ -0.74
USP11-207ENST00000478596 ZFAND2AQ8N6M9 145 aa10.4□□□□□ -0.74
USP11-207ENST00000478596 SMDT1Q9H4I9 107 aa10.4□□□□□ -0.74
USP11-207ENST00000478596 TRBV6-1A0A0K0K1D8 114 aa10.39□□□□□ -0.75
USP11-207ENST00000478596 SFTA3P0C7M3 94 aa10.39□□□□□ -0.75
USP11-207ENST00000478596 SOHLH1Q5JUK2 328 aa10.39□□□□□ -0.75
USP11-207ENST00000478596 PRR9Q5T870 116 aa10.39□□□□□ -0.75
USP11-207ENST00000478596 TMEM256Q8N2U0 113 aa10.39□□□□□ -0.75
USP11-207ENST00000478596 LINC01587Q99440 93 aa10.39□□□□□ -0.75
USP11-207ENST00000478596 KLF12Q9Y4X4 402 aa10.39□□□□□ -0.75
USP11-207ENST00000478596 MYCBP2O75592 4640 aa10.39□□□□□ -0.75
USP11-207ENST00000478596 IGHV4-4A0A075B6R2 117 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 TRAV21A0A0B4J279 112 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 KLLNB2CW77 178 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 P0DMU3 169 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 FAM231AP0DMU4 169 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 FAM231CP0DMU5 169 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 KIR3DS1Q14943 382 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 UQCC3Q6UW78 93 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 Q6ZR54 194 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 TMEM183AQ8IXX5 376 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 ZC2HC1AQ96GY0 325 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 FAM19A4Q96LR4 140 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 C20orf144Q9BQM9 153 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 BIN3Q9NQY0 253 aa10.38□□□□□ -0.75
USP11-207ENST00000478596 LINC00862A6NCI5 91 aa10.37□□□□□ -0.75
USP11-207ENST00000478596 PGPEP1LA6NFU8 196 aa10.37□□□□□ -0.75
USP11-207ENST00000478596 NDUFS6O75380 124 aaKnown RBP10.37□□□□□ -0.75
USP11-207ENST00000478596 MUC21Q5SSG8 566 aa10.37□□□□□ -0.75
USP11-207ENST00000478596 FAM162BQ5T6X4 162 aa10.37□□□□□ -0.75
USP11-207ENST00000478596 OR11H2Q8NH07 326 aa10.37□□□□□ -0.75
USP11-207ENST00000478596 DAZAP1Q96EP5 407 aaKnown RBP10.37□□□□□ -0.75
USP11-207ENST00000478596 TVP23CQ96ET8 276 aa10.37□□□□□ -0.75
USP11-207ENST00000478596 CBY3A6NI87 242 aa10.36□□□□□ -0.75
USP11-207ENST00000478596 C9JCJ5 164 aa10.36□□□□□ -0.75
USP11-207ENST00000478596 C9JQL5 133 aa10.36□□□□□ -0.75
USP11-207ENST00000478596 H7BYZ3 331 aa10.36□□□□□ -0.75
USP11-207ENST00000478596 CRXO43186 299 aaPredicted RBP10.36□□□□□ -0.75
USP11-207ENST00000478596 PFN1P07737 140 aaKnown RBP10.36□□□□□ -0.75
USP11-207ENST00000478596 GIG44P09565 113 aaPredicted RBP10.36□□□□□ -0.75
USP11-207ENST00000478596 OR5I1Q13606 314 aa10.36□□□□□ -0.75
USP11-207ENST00000478596 FAM74A3Q4VXF1 159 aa10.36□□□□□ -0.75
USP11-207ENST00000478596 FAM159AQ6UWV7 190 aa10.36□□□□□ -0.75
USP11-207ENST00000478596 SRRM2Q9UQ35 2752 aaKnown RBP10.35□□□□□ -0.75
USP11-207ENST00000478596 SH2D1AO60880 128 aa10.35□□□□□ -0.75
USP11-207ENST00000478596 ADIRFQ15847 76 aa10.35□□□□□ -0.75
USP11-207ENST00000478596 RRN3P1Q2M238 152 aa10.35□□□□□ -0.75
USP11-207ENST00000478596 Q6AWC8 147 aa10.35□□□□□ -0.75
USP11-207ENST00000478596 SMIM12Q96EX1 92 aa10.35□□□□□ -0.75
USP11-207ENST00000478596 TRBV20OR9-2A0A075B6H5 130 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 IGHV1OR15-1A0A075B7D0 117 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 FABP5P3A8MUU1 101 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 ZNF705GA8MUZ8 300 aaPredicted RBP10.34□□□□□ -0.75
USP11-207ENST00000478596 M0R036 132 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 ORM1P02763 201 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
USP11-207ENST00000478596 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 INAFM2P0DMQ5 153 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 C1orf158Q8N1D5 194 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 PYGO2Q9BRQ0 406 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 SDF2L1Q9HCN8 221 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 NAT8Q9UHE5 227 aa10.34□□□□□ -0.75
USP11-207ENST00000478596 TRAV10A0A0B4J240 114 aa10.33□□□□□ -0.76
USP11-207ENST00000478596 F8W036 122 aa10.33□□□□□ -0.76
USP11-207ENST00000478596 ZNF80P51504 273 aaPredicted RBP10.33□□□□□ -0.76
USP11-207ENST00000478596 EMP1P54849 157 aa10.33□□□□□ -0.76
USP11-207ENST00000478596 TMEM241Q24JQ0 296 aa10.33□□□□□ -0.76
USP11-207ENST00000478596 EIF4E3Q8N5X7 224 aaKnown RBP10.33□□□□□ -0.76
USP11-207ENST00000478596 CSNK1G2-AS1Q8NCQ2 148 aa10.33□□□□□ -0.76
USP11-207ENST00000478596 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
USP11-207ENST00000478596 TMSB15BA0A087X1C1 80 aa10.32□□□□□ -0.76
USP11-207ENST00000478596 B4DEV8 164 aa10.32□□□□□ -0.76
USP11-207ENST00000478596 DEFB4AO15263 64 aa10.32□□□□□ -0.76
USP11-207ENST00000478596 P01737 135 aa10.32□□□□□ -0.76
USP11-207ENST00000478596 MIFP14174 115 aa10.32□□□□□ -0.76
USP11-207ENST00000478596 ZNF415Q09FC8 603 aa10.32□□□□□ -0.76
USP11-207ENST00000478596 ZNF705AQ6ZN79 300 aaPredicted RBP10.32□□□□□ -0.76
USP11-207ENST00000478596 C16orf74Q96GX8 76 aa10.32□□□□□ -0.76
USP11-207ENST00000478596 KCNS1Q96KK3 526 aa10.32□□□□□ -0.76
USP11-207ENST00000478596 TIMM8BQ9Y5J9 83 aaPredicted RBP10.32□□□□□ -0.76
USP11-207ENST00000478596 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
USP11-207ENST00000478596 EPM2AB3EWF7 344 aa10.31□□□□□ -0.76
USP11-207ENST00000478596 S100A4P26447 101 aaKnown RBP10.31□□□□□ -0.76
USP11-207ENST00000478596 NDUFA5Q16718 116 aa10.31□□□□□ -0.76
USP11-207ENST00000478596 ANXA2RQ3ZCQ2 193 aa10.31□□□□□ -0.76
USP11-207ENST00000478596 C1orf134Q5TEV5 83 aa10.31□□□□□ -0.76
USP11-207ENST00000478596 Q6ZQT7 251 aa10.31□□□□□ -0.76
USP11-207ENST00000478596 OCC1Q8TAD7 63 aa10.31□□□□□ -0.76
USP11-207ENST00000478596 LY96Q9Y6Y9 160 aa10.31□□□□□ -0.76
USP11-207ENST00000478596 IGHV4-28A0A0C4DH34 117 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 TMEM218A2RU14 115 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 TMEM189A5PLL7 270 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms