RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ZFP30Q9Y2G7 519 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 GOLT1BQ9Y3E0 138 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 TRBV20OR9-2A0A075B6H5 130 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 TRAV10A0A0B4J240 114 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 A8MTW9 85 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 H7BYZ3 331 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 CRXO43186 299 aaPredicted RBP5.93□□□□□ -1.46
HDAC6-221ENST00000477561 SCO1O75880 301 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 GCGP01275 180 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 MGST1P10620 155 aaKnown RBP5.93□□□□□ -1.46
HDAC6-221ENST00000477561 ERVFC1-1P60608 527 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 BTN1A1Q13410 526 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 SAPCD1Q5SSQ6 148 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 PRNTQ86SH4 94 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 TMEM183AQ8IXX5 376 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 SFRP2Q96HF1 295 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 NEU1Q99519 415 aa5.93□□□□□ -1.46
HDAC6-221ENST00000477561 EPPK1P58107 5090 aaKnown RBP5.93□□□□□ -1.46
HDAC6-221ENST00000477561 TRAV8-1A0A0A6YYK1 113 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 PGPEP1LA6NFU8 196 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 SMIM9A6NGZ8 99 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 ZNF705GA8MUZ8 300 aaPredicted RBP5.92□□□□□ -1.46
HDAC6-221ENST00000477561 INSP01308 110 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 IGLV2-11P01706 119 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 SPART-AS1P0CW21 52 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 CT45A10P0DMU9 189 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 HTN1P15515 57 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 KIR3DS1Q14943 382 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 RRN3P1Q2M238 152 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 RNF212Q495C1 297 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 TMEM78Q5T7P6 136 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 FAM222AQ5U5X8 452 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 OR10G8Q8NGN5 311 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 OR10J6PQ8NGY7 276 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 SGK494Q96LW2 274 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 OSTCQ9NRP0 149 aa5.92□□□□□ -1.46
HDAC6-221ENST00000477561 IGKV2-40A0A087WW87 121 aaPredicted RBP5.91□□□□□ -1.46
HDAC6-221ENST00000477561 DEFB131BA0A096LNP1 70 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 TMEM189A5PLL7 270 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 J3KRW8 73 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 K7EN84 100 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 IGKV2D-40P01614 121 aaPredicted RBP5.91□□□□□ -1.46
HDAC6-221ENST00000477561 IGLV2-8P01709 118 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 AMBPP02760 352 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 AZU1P20160 251 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 S100PP25815 95 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 IBA57Q5T440 356 aaKnown RBP5.91□□□□□ -1.46
HDAC6-221ENST00000477561 TMEM88Q6PEY1 159 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 KCNIP4Q6PIL6 250 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 C9orf47Q6ZRZ4 202 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 FAM231DQ6ZW35 169 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 CBLN2Q8IUK8 224 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 DAZAP1Q96EP5 407 aaKnown RBP5.91□□□□□ -1.46
HDAC6-221ENST00000477561 LINC00477Q96M19 166 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 IMMP2LQ96T52 175 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 LINC01587Q99440 93 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 MLST8Q9BVC4 326 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 ZNF492Q9P255 531 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 DKK2Q9UBU2 259 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 APLNQ9ULZ1 77 aa5.91□□□□□ -1.46
HDAC6-221ENST00000477561 DNAH10Q8IVF4 4471 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 IGHV4-4A0A075B6R2 117 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 NPIPB6E9PJ23 425 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 HTN3P15516 51 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 ZNF138P52744 262 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 OR5I1Q13606 314 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 SMUG1Q53HV7 270 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 LGALS9CQ6DKI2 356 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 PRR27Q6MZM9 219 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 COX8CQ7Z4L0 72 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 NHLRC2Q8NBF2 726 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 BTF3L4Q96K17 158 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 VGLL1Q99990 258 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 LENEPQ9Y5L5 61 aa5.9□□□□□ -1.46
HDAC6-221ENST00000477561 KMT2AQ03164 3969 aa5.9□□□□□ -1.47
HDAC6-221ENST00000477561 TRBV7-9A0A0J9YWB2 115 aa5.89□□□□□ -1.47
HDAC6-221ENST00000477561 GATCO43716 136 aaKnown RBP5.89□□□□□ -1.47
HDAC6-221ENST00000477561 P01737 135 aa5.89□□□□□ -1.47
HDAC6-221ENST00000477561 CDKN1BP46527 198 aa5.89□□□□□ -1.47
HDAC6-221ENST00000477561 RPL19P84098 196 aaKnown RBP5.89□□□□□ -1.47
HDAC6-221ENST00000477561 ERCC8Q13216 396 aa5.89□□□□□ -1.47
HDAC6-221ENST00000477561 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.89□□□□□ -1.47
HDAC6-221ENST00000477561 AGPAT4-IT1Q9H0P7 198 aa5.89□□□□□ -1.47
HDAC6-221ENST00000477561 TRAV12-3A0A0B4J271 114 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 TCTAP57738 103 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 DAD1P61803 113 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 CT83Q5H943 113 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 FAM162BQ5T6X4 162 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
HDAC6-221ENST00000477561 GFI1BQ5VTD9 330 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 NUDT10Q8NFP7 164 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 Q8TAT8 98 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 NUDT11Q96G61 164 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 ZC2HC1AQ96GY0 325 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 ODF3Q96PU9 254 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 RNASE7Q9H1E1 156 aaKnown RBP5.88□□□□□ -1.47
HDAC6-221ENST00000477561 RPP21Q9H633 154 aaKnown RBP5.88□□□□□ -1.47
HDAC6-221ENST00000477561 IL36BQ9NZH7 164 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 V9GYV3 84 aa5.88□□□□□ -1.47
HDAC6-221ENST00000477561 TRAV9-1A0A075B6T8 112 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms