RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 A8MWP4 228 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 UQCRQO14949 82 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 SNAPC5O75971 98 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 TCL1BO95988 128 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 IGLV1-47P01700 117 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 MSMBP08118 114 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 CGB3P0DN86 165 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 CGB7P0DN87 165 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 NFYAP23511 347 aaPredicted RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 TPPP2P59282 170 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 TMEM258P61165 79 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 MRPS21P82921 87 aaKnown RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 EIF5AL1Q6IS14 154 aaKnown RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 NOXRED1Q6NXP6 359 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF705AQ6ZN79 300 aaPredicted RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 C16orf47Q6ZP98 133 aaPredicted RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 Q6ZQT7 251 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF767PQ75MW2 155 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 RPS19BP1Q86WX3 136 aaKnown RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF101Q8IZC7 436 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 C11orf42Q8N5U0 333 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 MIR7-3HGQ8N6C7 128 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 CNEP1R1Q8N9A8 125 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 BPIFB6Q8NFQ5 453 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 OR4B1Q8NGF8 309 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 OR5D14Q8NGL3 314 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 OR5H6Q8NGV6 325 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 CLDND2Q8NHS1 167 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 CIRBP-AS1Q8TBR5 109 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 SFT2D1Q8WV19 159 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 DEDD2Q8WXF8 326 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 RBPMSQ93062 196 aaKnown RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 IMMP1LQ96LU5 166 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 PRELID3AQ96N28 172 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 OR4C12Q96R67 309 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 MIEN1Q9BRT3 115 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 GINS4Q9BRT9 223 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 SNRNP25Q9BV90 132 aaKnown RBP1.95□□□□□ -2.1
HMGN4-202ENST00000477243 DUSP21Q9H596 190 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF580Q9UK33 172 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF835Q9Y2P0 537 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 MPC1Q9Y5U8 109 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 EML5Q05BV3 1969 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 SCN1AP35498 2009 aa1.95□□□□□ -2.1
HMGN4-202ENST00000477243 POLEQ07864 2286 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 SRRM2Q9UQ35 2752 aaKnown RBP1.94□□□□□ -2.1
HMGN4-202ENST00000477243 ZFC3H1O60293 1989 aaKnown RBP1.94□□□□□ -2.1
HMGN4-202ENST00000477243 A0A0G2JMM0 328 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 A0A1W2PPB8 328 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 C7orf71A4D174 169 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 A6NED7 52 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 KIR3DP1A8MWS1 328 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 C3orf84H3BNL1 204 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 YPEL1O60688 119 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 TNFP01375 233 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 IGKV1D-33P01593 117 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 IGKV1-33P01594 117 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 IGHV1-69P01742 117 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 CXCL1P09341 107 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 CCL3P10147 92 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 HIST1H1BP16401 226 aaKnown RBP1.94□□□□□ -2.1
HMGN4-202ENST00000477243 HLA-DMBP28068 263 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 RNASE4P34096 147 aaKnown RBP1.94□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF93P35789 620 aaPredicted RBP1.94□□□□□ -2.1
HMGN4-202ENST00000477243 CRIP2P52943 208 aaPredicted RBP1.94□□□□□ -2.1
HMGN4-202ENST00000477243 ARPP19P56211 112 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 MIAQ16674 131 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 COL5A1-AS1Q5SY13 56 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 GFI1BQ5VTD9 330 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF322Q6U7Q0 402 aaPredicted RBP1.94□□□□□ -2.1
HMGN4-202ENST00000477243 IZUMO2Q6UXV1 221 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 TEX29Q8N6K0 151 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 SIGLECL1Q8N7X8 197 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 ZFP62Q8NB50 900 aaPredicted RBP1.94□□□□□ -2.1
HMGN4-202ENST00000477243 MORN4Q8NDC4 146 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 OR10P1Q8NGE3 313 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 TYMSOSQ8TAI1 123 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 STAG3L4Q8TBR4 150 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF714Q96N38 554 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 LINC00467Q9BRT7 94 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 NPCDR1Q9BY65 106 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 SMDT1Q9H4I9 107 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 TXNL4BQ9NX01 149 aaKnown RBP1.94□□□□□ -2.1
HMGN4-202ENST00000477243 ZGRF1Q86YA3 2104 aa1.94□□□□□ -2.1
HMGN4-202ENST00000477243 HELZP42694 1942 aaKnown RBP1.93□□□□□ -2.1
HMGN4-202ENST00000477243 MYLKQ15746 1914 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 ARHGAP21Q5T5U3 1957 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 A0A0J9YW62 118 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 A0A1W2PNU3 283 aaPredicted RBP1.93□□□□□ -2.1
HMGN4-202ENST00000477243 ZNF727A8MUV8 499 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 C11orf94C9JXX5 98 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 FNDC10F2Z333 226 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 H3BMM0 161 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 SDCBPO00560 298 aaPredicted RBP1.93□□□□□ -2.1
HMGN4-202ENST00000477243 LECT2O14960 151 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 CCL25O15444 150 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 CREBL2O60519 120 aaPredicted RBP1.93□□□□□ -2.1
HMGN4-202ENST00000477243 LY6HO94772 140 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 MT-ND6P03923 174 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms