RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TMEM183AQ8IXX5 376 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 PHLDA1Q8WV24 401 aaPredicted RBP9.35□□□□□ -0.91
TPM3-216ENST00000473036 SGK494Q96LW2 274 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 LINC01587Q99440 93 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 C20orf144Q9BQM9 153 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 DKK2Q9UBU2 259 aa9.35□□□□□ -0.91
TPM3-216ENST00000473036 CXorf65A6NEN9 183 aa9.34□□□□□ -0.91
TPM3-216ENST00000473036 RRN3P1Q2M238 152 aa9.34□□□□□ -0.91
TPM3-216ENST00000473036 Q86TA4 180 aa9.34□□□□□ -0.91
TPM3-216ENST00000473036 TMEM208Q9BTX3 173 aa9.34□□□□□ -0.91
TPM3-216ENST00000473036 NAT8Q9UHE5 227 aa9.34□□□□□ -0.91
TPM3-216ENST00000473036 PCLOQ9Y6V0 5065 aa9.33□□□□□ -0.92
TPM3-216ENST00000473036 C7orf71A4D174 169 aa9.33□□□□□ -0.92
TPM3-216ENST00000473036 F8W036 122 aa9.33□□□□□ -0.92
TPM3-216ENST00000473036 IGLV2-11P01706 119 aa9.33□□□□□ -0.92
TPM3-216ENST00000473036 GPX1P07203 203 aa9.33□□□□□ -0.92
TPM3-216ENST00000473036 RNASE4P34096 147 aaKnown RBP9.33□□□□□ -0.92
TPM3-216ENST00000473036 SRSF3P84103 164 aaKnown RBP9.33□□□□□ -0.92
TPM3-216ENST00000473036 FAM222AQ5U5X8 452 aa9.33□□□□□ -0.92
TPM3-216ENST00000473036 CEMP1Q6PRD7 247 aaPredicted RBP9.33□□□□□ -0.92
TPM3-216ENST00000473036 RNASE8Q8TDE3 154 aaKnown RBP9.33□□□□□ -0.92
TPM3-216ENST00000473036 DAZAP1Q96EP5 407 aaKnown RBP9.33□□□□□ -0.92
TPM3-216ENST00000473036 LINC00479Q96M42 142 aa9.33□□□□□ -0.92
TPM3-216ENST00000473036 TRAV34A0A0B4J273 112 aa9.32□□□□□ -0.92
TPM3-216ENST00000473036 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
TPM3-216ENST00000473036 FABP5P3A8MUU1 101 aa9.32□□□□□ -0.92
TPM3-216ENST00000473036 B4DEV8 164 aa9.32□□□□□ -0.92
TPM3-216ENST00000473036 H7BYZ3 331 aa9.32□□□□□ -0.92
TPM3-216ENST00000473036 HTN1P15515 57 aa9.32□□□□□ -0.92
TPM3-216ENST00000473036 CENPWQ5EE01 88 aa9.32□□□□□ -0.92
TPM3-216ENST00000473036 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
TPM3-216ENST00000473036 TRAV21A0A0B4J279 112 aa9.31□□□□□ -0.92
TPM3-216ENST00000473036 C9JQL5 133 aa9.31□□□□□ -0.92
TPM3-216ENST00000473036 FAM162BQ5T6X4 162 aa9.31□□□□□ -0.92
TPM3-216ENST00000473036 MLST8Q9BVC4 326 aa9.31□□□□□ -0.92
TPM3-216ENST00000473036 TP53TG3Q9ULZ0 132 aa9.31□□□□□ -0.92
TPM3-216ENST00000473036 TMEM189A5PLL7 270 aa9.3□□□□□ -0.92
TPM3-216ENST00000473036 LY6G6CO95867 125 aa9.3□□□□□ -0.92
TPM3-216ENST00000473036 SPART-AS1P0CW21 52 aa9.3□□□□□ -0.92
TPM3-216ENST00000473036 DERL1Q9BUN8 251 aa9.3□□□□□ -0.92
TPM3-216ENST00000473036 DNAH11Q96DT5 4516 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 XKRY2A2RUG3 117 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 PPP1R2P9O14990 202 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 PFN1P07737 140 aaKnown RBP9.29□□□□□ -0.92
TPM3-216ENST00000473036 MGST1P10620 155 aaKnown RBP9.29□□□□□ -0.92
TPM3-216ENST00000473036 ZNF80P51504 273 aaPredicted RBP9.29□□□□□ -0.92
TPM3-216ENST00000473036 C10orf91Q5T1B1 145 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 Q6AWC8 147 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 SLC7A5P1Q8MH63 180 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 SVBPQ8N300 66 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 C15orf54Q8N8G6 183 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 C11orf72Q8NBR9 251 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 OCC1Q8TAD7 63 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 TMEM263Q8WUH6 116 aaKnown RBP9.29□□□□□ -0.92
TPM3-216ENST00000473036 KCNS1Q96KK3 526 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 C8orf49Q96NF6 230 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 LINC00467Q9BRT7 94 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 SDF2L1Q9HCN8 221 aa9.29□□□□□ -0.92
TPM3-216ENST00000473036 CARHSP1Q9Y2V2 147 aaKnown RBP9.29□□□□□ -0.92
TPM3-216ENST00000473036 GCGP01275 180 aa9.28□□□□□ -0.92
TPM3-216ENST00000473036 FAM231DQ6ZW35 169 aa9.28□□□□□ -0.92
TPM3-216ENST00000473036 LINC01551Q86U37 167 aa9.28□□□□□ -0.92
TPM3-216ENST00000473036 C16orf74Q96GX8 76 aa9.28□□□□□ -0.92
TPM3-216ENST00000473036 PYGO2Q9BRQ0 406 aa9.28□□□□□ -0.92
TPM3-216ENST00000473036 NOP10Q9NPE3 64 aaKnown RBP9.28□□□□□ -0.92
TPM3-216ENST00000473036 KLK5Q9Y337 293 aaPredicted RBP9.28□□□□□ -0.92
TPM3-216ENST00000473036 HECTD4Q9Y4D8 3996 aa9.28□□□□□ -0.92
TPM3-216ENST00000473036 TRBV20OR9-2A0A075B6H5 130 aa9.27□□□□□ -0.93
TPM3-216ENST00000473036 SNAPINO95295 136 aa9.27□□□□□ -0.93
TPM3-216ENST00000473036 MT-ND4LP03901 98 aa9.27□□□□□ -0.93
TPM3-216ENST00000473036 S100A1P23297 94 aa9.27□□□□□ -0.93
TPM3-216ENST00000473036 RPS20P60866 119 aaKnown RBP9.27□□□□□ -0.93
TPM3-216ENST00000473036 ADIRFQ15847 76 aa9.27□□□□□ -0.93
TPM3-216ENST00000473036 FAM159AQ6UWV7 190 aa9.27□□□□□ -0.93
TPM3-216ENST00000473036 LINC00612Q8N6U2 182 aa9.27□□□□□ -0.93
TPM3-216ENST00000473036 C11orf21Q9P2W6 132 aa9.27□□□□□ -0.93
TPM3-216ENST00000473036 IGHV1OR15-1A0A075B7D0 117 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 DEFB131BA0A096LNP1 70 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 TRAV10A0A0B4J240 114 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 LYRM9A8MSI8 78 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 P01737 135 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 ERVFC1-1P60608 527 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
TPM3-216ENST00000473036 ANXA2RQ3ZCQ2 193 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 MUC21Q5SSG8 566 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 IBA57Q5T440 356 aaKnown RBP9.26□□□□□ -0.93
TPM3-216ENST00000473036 ZNF493Q6ZR52 646 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 ANAPC16Q96DE5 110 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 ZC2HC1AQ96GY0 325 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 GSN-AS1Q9NRJ2 163 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 OSTCQ9NRP0 149 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 APLNQ9ULZ1 77 aa9.26□□□□□ -0.93
TPM3-216ENST00000473036 IGLL5B9A064 214 aa9.25□□□□□ -0.93
TPM3-216ENST00000473036 IGLV2-8P01709 118 aa9.25□□□□□ -0.93
TPM3-216ENST00000473036 DEFB130BP0DP73 79 aa9.25□□□□□ -0.93
TPM3-216ENST00000473036 DEFB130AP0DP74 79 aa9.25□□□□□ -0.93
TPM3-216ENST00000473036 RHEBQ15382 184 aa9.25□□□□□ -0.93
TPM3-216ENST00000473036 TDRG1Q3Y452 100 aa9.25□□□□□ -0.93
TPM3-216ENST00000473036 PRR27Q6MZM9 219 aa9.25□□□□□ -0.93
TPM3-216ENST00000473036 SFRP2Q96HF1 295 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms