RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 DUX4L9Q6RFH8 374 aaPredicted RBP3.28□□□□□ -1.88
VPS50-210ENST00000471188 IL17RELQ6ZVW7 336 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 MGAQ8IWI9 3026 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 LINC01565O15544 149 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 GUSBP11Q6P575 273 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 SIGLEC15Q6ZMC9 328 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 LRRC75A-AS1Q8N1F1 130 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 SLC25A45Q8N413 288 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 HES7Q9BYE0 225 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 SIGLEC9Q9Y336 463 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 S4R3C0 116 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 DSCAMO60469 2012 aa3.28□□□□□ -1.88
VPS50-210ENST00000471188 TRAV41A0A0B4J266 112 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 A0A0J9YY99 117 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 UQCRQO14949 82 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 SPRY3O43610 288 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 TRGV3P03979 118 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 ZNF22P17026 224 aaPredicted RBP3.27□□□□□ -1.89
VPS50-210ENST00000471188 DLX1P56177 255 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 VMA21Q3ZAQ7 101 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 SPANXN1Q5VSR9 72 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 PMS2CLQ68D20 193 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 HRCT1Q6UXD1 115 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 ASCL5Q7RTU5 278 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 PIMREGQ9BSJ6 248 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 ZNF71Q9NQZ8 489 aaPredicted RBP3.27□□□□□ -1.89
VPS50-210ENST00000471188 CACNA1BQ00975 2339 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 POLEQ07864 2286 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 TRBV10-2A0A0K0K1G8 114 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 INS-IGF2F8WCM5 200 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 PRSS2P07478 247 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 CCL5P13501 91 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 LGALS3P17931 250 aaKnown RBP3.27□□□□□ -1.89
VPS50-210ENST00000471188 FOLR3P41439 243 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 RPL27AP46776 148 aaKnown RBP3.27□□□□□ -1.89
VPS50-210ENST00000471188 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
VPS50-210ENST00000471188 MAFAQ8NHW3 353 aaPredicted RBP3.27□□□□□ -1.89
VPS50-210ENST00000471188 CCL13Q99616 98 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 CITED2Q99967 270 aaPredicted RBP3.27□□□□□ -1.89
VPS50-210ENST00000471188 NACAE9PAV3 2078 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 PKDREJQ9NTG1 2253 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 IGHV3-64A0A075B6Q5 118 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 IGHV1OR15-9A0A0B4J2B8 117 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 IGHV5-10-1A0A0J9YXX1 117 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 hADV29S1A0JD25 119 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 CGB1A6NKQ9 187 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 SRRM5B3KS81 715 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 M0R2P5 195 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 CNEP1R1Q8N9A8 125 aa3.27□□□□□ -1.89
VPS50-210ENST00000471188 IGHV3-30P01768 117 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 IGHV3-33P01772 117 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 PF4P02776 101 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 ELANEP08246 267 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 IGHV3-30-5P0DP03 117 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 SRSF2Q01130 221 aaKnown RBP3.26□□□□□ -1.89
VPS50-210ENST00000471188 KLRB1Q12918 225 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 C4orf26Q17RF5 130 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 C2orf66Q6UXQ4 117 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 FAM216BQ8N7L0 139 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 TMEM167AQ8TBQ9 72 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 TMEM14CQ9P0S9 112 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 TRANK1O15050 2925 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 TRAV8-3A0A0A6YYJ7 113 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 TRAV12-1A0A0B4J245 112 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 TRBV6-1A0A0K0K1D8 114 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 RS1O15537 224 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 COX6CP09669 75 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 ORMDL2Q53FV1 153 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 TMEM219Q86XT9 240 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 BAALCQ8WXS3 180 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 EEF1AKMT3Q96AZ1 226 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 C1orf43Q9BWL3 253 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 DEFB127Q9H1M4 99 aa3.26□□□□□ -1.89
VPS50-210ENST00000471188 IGLV2-18A0A075B6J9 118 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 IGHV3OR16-8A0A075B7F1 116 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 TRAV12-3A0A0B4J271 114 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 C11orf86A6NJI1 115 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 K7EM74 188 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 TRACP01848 142 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 MGPP08493 103 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 CCL4P13236 92 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 CCL3L1P16619 93 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 DLX6P56179 175 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 LYPD1Q8N2G4 141 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 NEXN-AS1Q8NBZ9 246 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 IGFBPL1Q8WX77 278 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 RNF125Q96EQ8 232 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 SHANK2-AS3Q9BTD1 123 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 SMIM2Q9BVW6 85 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 M0R381 172 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 SPRY2O43597 315 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 CCL11P51671 97 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 NPC2P61916 151 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 ERCC8Q13216 396 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 MUSTN1Q8IVN3 82 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 C14orf178Q8N769 122 aaPredicted RBP3.25□□□□□ -1.89
VPS50-210ENST00000471188 KIR2DL5BQ8NHK3 375 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 LINC00526Q96FQ7 95 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 DSCR8Q96T75 97 aa3.25□□□□□ -1.89
VPS50-210ENST00000471188 IGHV3-35A0A0C4DH35 117 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms